RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 VPS37DQ86XT2 251 aa13.99□□□□□ -0.17
TNFRSF1A-208ENST00000536194 XAGE2Q96GT9 111 aa13.99□□□□□ -0.17
TNFRSF1A-208ENST00000536194 AKAP2Q9Y2D5 859 aa13.99□□□□□ -0.17
TNFRSF1A-208ENST00000536194 AKAP11Q9UKA4 1901 aa13.99□□□□□ -0.17
TNFRSF1A-208ENST00000536194 HMMRO75330 724 aa13.98□□□□□ -0.17
TNFRSF1A-208ENST00000536194 ZNF280AP59817 542 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-208ENST00000536194 TNNI3KQ59H18 835 aa13.98□□□□□ -0.17
TNFRSF1A-208ENST00000536194 CCDC102BQ68D86 513 aa13.98□□□□□ -0.17
TNFRSF1A-208ENST00000536194 USP50Q70EL3 339 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-208ENST00000536194 PNMA8AQ86V59 439 aaPredicted RBP13.98□□□□□ -0.17
TNFRSF1A-208ENST00000536194 GPR108Q9NPR9 543 aa13.98□□□□□ -0.17
TNFRSF1A-208ENST00000536194 FPGT-TNNI3KV9GXZ4 949 aa13.98□□□□□ -0.17
TNFRSF1A-208ENST00000536194 ECM29Q5VYK3 1845 aa13.98□□□□□ -0.17
TNFRSF1A-208ENST00000536194 MYO3BQ8WXR4 1341 aa13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 H7C1D1 291 aa13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 USP17L8P0C7I0 530 aa13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 FKBP1AP62942 108 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 CHAF1AQ13111 956 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 GRIK5Q16478 980 aa13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 TBC1D10BQ4KMP7 808 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 LDHDQ86WU2 507 aa13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 KIAA0825Q8IV33 1275 aa13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 EXOC6Q8TAG9 804 aa13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 NEUROD6Q96NK8 337 aa13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 TLR7Q9NYK1 1049 aaKnown RBP13.97□□□□□ -0.17
TNFRSF1A-208ENST00000536194 MYO5AQ9Y4I1 1855 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 IRX6P78412 446 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 KIF4BQ2VIQ3 1234 aa13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 MFSD14BQ5SR56 506 aa13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 RBM26Q5T8P6 1007 aaKnown RBP13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 CHADLQ6NUI6 762 aa13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 SMC1BQ8NDV3 1235 aa13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 RHPN1Q8TCX5 695 aa13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 EAF2Q96CJ1 260 aaPredicted RBP13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 DBNDD2Q9BQY9 259 aa13.96□□□□□ -0.17
TNFRSF1A-208ENST00000536194 ASTN2O75129 1339 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 APBB1O00213 710 aa13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 ZBTB22O15209 634 aa13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 FRAT2O75474 233 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 FSTL1Q12841 308 aa13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 RASGRF1Q13972 1273 aa13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 HSP90AB4PQ58FF6 505 aa13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 MAP1SQ66K74 1059 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 ERC1Q8IUD2 1116 aa13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 IL1RAPL2Q9NP60 686 aa13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 MYOZ2Q9NPC6 264 aa13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 DBNLQ9UJU6 430 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-208ENST00000536194 F8W031 263 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1A-208ENST00000536194 SCARF1Q14162 830 aa13.94□□□□□ -0.18
TNFRSF1A-208ENST00000536194 PI16Q6UXB8 463 aa13.94□□□□□ -0.18
TNFRSF1A-208ENST00000536194 KIF1BPQ96EK5 621 aa13.94□□□□□ -0.18
TNFRSF1A-208ENST00000536194 CCDC8Q9H0W5 538 aaPredicted RBP13.94□□□□□ -0.18
TNFRSF1A-208ENST00000536194 DCTPP1Q9H773 170 aa13.94□□□□□ -0.18
TNFRSF1A-208ENST00000536194 PGAP2Q9UHJ9 254 aa13.94□□□□□ -0.18
TNFRSF1A-208ENST00000536194 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
TNFRSF1A-208ENST00000536194 PCDHAC2Q9Y5I4 1007 aa13.94□□□□□ -0.18
TNFRSF1A-208ENST00000536194 TRPM7Q96QT4 1865 aa13.93□□□□□ -0.18
TNFRSF1A-208ENST00000536194 SEMA3EO15041 775 aa13.93□□□□□ -0.18
TNFRSF1A-208ENST00000536194 RAB11FIP3O75154 756 aa13.93□□□□□ -0.18
TNFRSF1A-208ENST00000536194 ITGBL1O95965 494 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1A-208ENST00000536194 ARID4AP29374 1257 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1A-208ENST00000536194 AACSQ86V21 672 aa13.93□□□□□ -0.18
TNFRSF1A-208ENST00000536194 ZBED3Q96IU2 234 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1A-208ENST00000536194 GNL3LQ9NVN8 582 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-208ENST00000536194 DENND2AQ9ULE3 1009 aa13.93□□□□□ -0.18
TNFRSF1A-208ENST00000536194 AOX1Q06278 1338 aa13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 PDS5AQ29RF7 1337 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 MYH2Q9UKX2 1941 aa13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 WNT10BO00744 389 aa13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 MCAMP43121 646 aa13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 FMR1Q06787 632 aaKnown RBP eCLIP13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 NBPF9Q3BBW0 867 aa13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 CNTROBQ8N137 903 aa13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 OGFOD1Q8N543 542 aa13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 ZC3H15Q8WU90 426 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 TBC1D22AQ8WUA7 517 aa13.92□□□□□ -0.18
TNFRSF1A-208ENST00000536194 PASKQ96RG2 1323 aa13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 SALL1Q9NSC2 1324 aa13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 SMARCA5O60264 1052 aaPredicted RBP13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 PRDX5P30044 214 aa13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 GORABQ5T7V8 394 aa13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 WDR66Q8TBY9 1149 aa13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 GGA3Q9NZ52 723 aa13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 HMG20BQ9P0W2 317 aa13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 HDAC9Q9UKV0 1011 aa13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 TTF2Q9UNY4 1162 aaKnown RBP13.91□□□□□ -0.18
TNFRSF1A-208ENST00000536194 DOCK2Q92608 1830 aa13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 TRAF5O00463 557 aa13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 MMP14P50281 582 aa13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 HDAC1Q13547 482 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 AAMPQ13685 434 aa13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 CFAP100Q494V2 611 aa13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 ANGEL2Q5VTE6 544 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 DLK2Q6UY11 383 aa13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 CLASRPQ8N2M8 674 aaKnown RBP13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 SPATA5Q8NB90 893 aa13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 MTMR14Q8NCE2 650 aa13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 GLIS2Q9BZE0 524 aaPredicted RBP13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 LRRCC1Q9C099 1032 aa13.9□□□□□ -0.18
TNFRSF1A-208ENST00000536194 MAST2Q6P0Q8 1798 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms