RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 ZKSCAN2Q63HK3 967 aa20.5■□□□□ 0.87
ATL3-202ENST00000535789 SIL1Q9H173 461 aa20.5■□□□□ 0.87
ATL3-202ENST00000535789 ABT1Q9ULW3 272 aaKnown RBP20.5■□□□□ 0.87
ATL3-202ENST00000535789 FAM205AQ6ZU69 1335 aa20.5■□□□□ 0.87
ATL3-202ENST00000535789 LAMB1P07942 1786 aa20.49■□□□□ 0.87
ATL3-202ENST00000535789 IPO8O15397 1037 aaKnown RBP20.49■□□□□ 0.87
ATL3-202ENST00000535789 MTX1Q13505 466 aa20.49■□□□□ 0.87
ATL3-202ENST00000535789 FBXO33Q7Z6M2 555 aa20.49■□□□□ 0.87
ATL3-202ENST00000535789 ZNF408Q9H9D4 720 aa20.49■□□□□ 0.87
ATL3-202ENST00000535789 HIBADHP31937 336 aaKnown RBP20.48■□□□□ 0.87
ATL3-202ENST00000535789 GRIK5Q16478 980 aa20.48■□□□□ 0.87
ATL3-202ENST00000535789 SAPCD2Q86UD0 394 aa20.48■□□□□ 0.87
ATL3-202ENST00000535789 DCPSQ96C86 337 aaKnown RBP20.48■□□□□ 0.87
ATL3-202ENST00000535789 IQSEC3Q9UPP2 1182 aaPredicted RBP20.48■□□□□ 0.87
ATL3-202ENST00000535789 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.48■□□□□ 0.87
ATL3-202ENST00000535789 PITPNM2Q9BZ72 1349 aa20.48■□□□□ 0.87
ATL3-202ENST00000535789 HSPA1AP0DMV8 641 aaKnown RBP20.47■□□□□ 0.87
ATL3-202ENST00000535789 HSPA1BP0DMV9 641 aaKnown RBP20.47■□□□□ 0.87
ATL3-202ENST00000535789 FKBP1AP62942 108 aaKnown RBP20.47■□□□□ 0.87
ATL3-202ENST00000535789 DEFB115Q30KQ5 88 aa20.47■□□□□ 0.87
ATL3-202ENST00000535789 CDCA5Q96FF9 252 aa20.47■□□□□ 0.87
ATL3-202ENST00000535789 COPRSQ9NQ92 184 aa20.47■□□□□ 0.87
ATL3-202ENST00000535789 MYO5AQ9Y4I1 1855 aaKnown RBP20.47■□□□□ 0.87
ATL3-202ENST00000535789 CIAO1O76071 339 aa20.46■□□□□ 0.87
ATL3-202ENST00000535789 GNAI3P08754 354 aa20.46■□□□□ 0.87
ATL3-202ENST00000535789 PUM3Q15397 648 aaKnown RBP20.46■□□□□ 0.87
ATL3-202ENST00000535789 CYP4F22Q6NT55 531 aa20.46■□□□□ 0.87
ATL3-202ENST00000535789 WDR33Q9C0J8 1336 aaKnown RBP20.46■□□□□ 0.87
ATL3-202ENST00000535789 SSC5DA1L4H1 1573 aa20.46■□□□□ 0.87
ATL3-202ENST00000535789 MYH2Q9UKX2 1941 aa20.45■□□□□ 0.86
ATL3-202ENST00000535789 PNMA6EA0A0J9YXQ4 647 aa20.45■□□□□ 0.86
ATL3-202ENST00000535789 F8W031 263 aaPredicted RBP20.45■□□□□ 0.86
ATL3-202ENST00000535789 BCAMP50895 628 aa20.45■□□□□ 0.86
ATL3-202ENST00000535789 AKAP11Q9UKA4 1901 aa20.45■□□□□ 0.86
ATL3-202ENST00000535789 SULF1Q8IWU6 871 aa20.44■□□□□ 0.86
ATL3-202ENST00000535789 OGFOD1Q8N543 542 aa20.44■□□□□ 0.86
ATL3-202ENST00000535789 CAPNS2Q96L46 248 aa20.44■□□□□ 0.86
ATL3-202ENST00000535789 FBXO3Q9UK99 471 aa20.44■□□□□ 0.86
ATL3-202ENST00000535789 SRGAP3O43295 1099 aa20.43■□□□□ 0.86
ATL3-202ENST00000535789 MFSD14BQ5SR56 506 aa20.43■□□□□ 0.86
ATL3-202ENST00000535789 C1orf115Q9H7X2 142 aa20.43■□□□□ 0.86
ATL3-202ENST00000535789 GNAI2P04899 355 aa20.42■□□□□ 0.86
ATL3-202ENST00000535789 PRAMEF18Q5VWM3 479 aa20.42■□□□□ 0.86
ATL3-202ENST00000535789 DZIP1LQ8IYY4 767 aaKnown RBP20.42■□□□□ 0.86
ATL3-202ENST00000535789 MTMR14Q8NCE2 650 aa20.42■□□□□ 0.86
ATL3-202ENST00000535789 HDAC9Q9UKV0 1011 aa20.42■□□□□ 0.86
ATL3-202ENST00000535789 SPDYE2BA6NHP3 402 aa20.41■□□□□ 0.86
ATL3-202ENST00000535789 AOC2O75106 756 aa20.41■□□□□ 0.86
ATL3-202ENST00000535789 SPDYE6P0CI01 402 aa20.41■□□□□ 0.86
ATL3-202ENST00000535789 ADORA1P30542 326 aa20.41■□□□□ 0.86
ATL3-202ENST00000535789 IL15P40933 162 aaPredicted RBP20.41■□□□□ 0.86
ATL3-202ENST00000535789 MMP14P50281 582 aa20.41■□□□□ 0.86
ATL3-202ENST00000535789 CFAP100Q494V2 611 aa20.41■□□□□ 0.86
ATL3-202ENST00000535789 PANK1Q8TE04 598 aa20.41■□□□□ 0.86
ATL3-202ENST00000535789 LPIN2Q92539 896 aa20.41■□□□□ 0.86
ATL3-202ENST00000535789 HHIPL1Q96JK4 782 aa20.41■□□□□ 0.86
ATL3-202ENST00000535789 GBA2Q9HCG7 927 aaPredicted RBP20.41■□□□□ 0.86
ATL3-202ENST00000535789 IFIT1P09914 478 aaKnown RBP20.4■□□□□ 0.86
ATL3-202ENST00000535789 SLC5A1P13866 664 aa20.4■□□□□ 0.86
ATL3-202ENST00000535789 HUNKP57058 714 aa20.4■□□□□ 0.86
ATL3-202ENST00000535789 CHAF1AQ13111 956 aaPredicted RBP20.4■□□□□ 0.86
ATL3-202ENST00000535789 ATP2B3Q16720 1220 aa20.4■□□□□ 0.86
ATL3-202ENST00000535789 PRMT6Q96LA8 375 aaPredicted RBP20.4■□□□□ 0.86
ATL3-202ENST00000535789 ZIC5Q96T25 663 aa20.4■□□□□ 0.86
ATL3-202ENST00000535789 HDAC5Q9UQL6 1122 aa20.4■□□□□ 0.86
ATL3-202ENST00000535789 ZBTB7BO15156 539 aaPredicted RBP20.39■□□□□ 0.85
ATL3-202ENST00000535789 FOXN1O15353 648 aa20.39■□□□□ 0.85
ATL3-202ENST00000535789 GRM1Q13255 1194 aa20.39■□□□□ 0.85
ATL3-202ENST00000535789 CAVIN4Q5BKX8 364 aa20.39■□□□□ 0.85
ATL3-202ENST00000535789 PAXIP1Q6ZW49 1069 aaPredicted RBP20.39■□□□□ 0.85
ATL3-202ENST00000535789 MOB2Q70IA6 237 aa20.39■□□□□ 0.85
ATL3-202ENST00000535789 ITPRIPQ8IWB1 547 aa20.39■□□□□ 0.85
ATL3-202ENST00000535789 FTSJ3Q8IY81 847 aaKnown RBP20.39■□□□□ 0.85
ATL3-202ENST00000535789 TTF2Q9UNY4 1162 aaKnown RBP20.39■□□□□ 0.85
ATL3-202ENST00000535789 MAST2Q6P0Q8 1798 aa20.39■□□□□ 0.85
ATL3-202ENST00000535789 FAM155AB1AL88 458 aaPredicted RBP20.38■□□□□ 0.85
ATL3-202ENST00000535789 PHKA1P46020 1223 aa20.38■□□□□ 0.85
ATL3-202ENST00000535789 POLA2Q14181 598 aa20.38■□□□□ 0.85
ATL3-202ENST00000535789 DLGAP5Q15398 846 aa20.38■□□□□ 0.85
ATL3-202ENST00000535789 VPS37DQ86XT2 251 aa20.38■□□□□ 0.85
ATL3-202ENST00000535789 WBP1LQ9NX94 342 aa20.38■□□□□ 0.85
ATL3-202ENST00000535789 CEP126Q9P2H0 1117 aa20.38■□□□□ 0.85
ATL3-202ENST00000535789 CDK5RAP2Q96SN8 1893 aa20.38■□□□□ 0.85
ATL3-202ENST00000535789 CLRN2A0PK11 232 aa20.37■□□□□ 0.85
ATL3-202ENST00000535789 TFCP2Q12800 502 aa20.37■□□□□ 0.85
ATL3-202ENST00000535789 APOBEC3FQ8IUX4 373 aaKnown RBP20.36■□□□□ 0.85
ATL3-202ENST00000535789 FZD1Q9UP38 647 aa20.36■□□□□ 0.85
ATL3-202ENST00000535789 DOCK2Q92608 1830 aa20.36■□□□□ 0.85
ATL3-202ENST00000535789 ECE1P42892 770 aa20.35■□□□□ 0.85
ATL3-202ENST00000535789 COL13A1Q5TAT6 717 aaPredicted RBP20.35■□□□□ 0.85
ATL3-202ENST00000535789 SSH3Q8TE77 659 aa20.35■□□□□ 0.85
ATL3-202ENST00000535789 SERPINA10Q9UK55 444 aa20.35■□□□□ 0.85
ATL3-202ENST00000535789 CASP8AP2Q9UKL3 1982 aa20.35■□□□□ 0.85
ATL3-202ENST00000535789 AK9Q5TCS8 1911 aa20.34■□□□□ 0.85
ATL3-202ENST00000535789 A0A1B0GUL7 405 aa20.34■□□□□ 0.85
ATL3-202ENST00000535789 CRKP46108 304 aa20.34■□□□□ 0.85
ATL3-202ENST00000535789 TIMM10P62072 90 aa20.34■□□□□ 0.85
ATL3-202ENST00000535789 SPDYE2Q495Y8 402 aa20.34■□□□□ 0.85
ATL3-202ENST00000535789 RGMBQ6NW40 437 aa20.34■□□□□ 0.85
ATL3-202ENST00000535789 CDAN1Q8IWY9 1227 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms