RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 HUNKP57058 714 aa13.01□□□□□ -0.33
CSDE1-217ENST00000534699 ANGEL2Q5VTE6 544 aaKnown RBP13.01□□□□□ -0.33
CSDE1-217ENST00000534699 TNS4Q8IZW8 715 aa13.01□□□□□ -0.33
CSDE1-217ENST00000534699 PDS5AQ29RF7 1337 aaKnown RBP13□□□□□ -0.33
CSDE1-217ENST00000534699 PDE8BO95263 885 aa13□□□□□ -0.33
CSDE1-217ENST00000534699 IFIT1P09914 478 aaKnown RBP13□□□□□ -0.33
CSDE1-217ENST00000534699 RARSP54136 660 aaKnown RBP13□□□□□ -0.33
CSDE1-217ENST00000534699 GTF2IP78347 998 aa13□□□□□ -0.33
CSDE1-217ENST00000534699 TNFAIP1Q13829 316 aa13□□□□□ -0.33
CSDE1-217ENST00000534699 DLGAP5Q15398 846 aa13□□□□□ -0.33
CSDE1-217ENST00000534699 ARMC9Q7Z3E5 817 aa13□□□□□ -0.33
CSDE1-217ENST00000534699 WNT10BO00744 389 aa13□□□□□ -0.33
CSDE1-217ENST00000534699 UBTFL1P0CB47 393 aaPredicted RBP13□□□□□ -0.33
CSDE1-217ENST00000534699 HOOK2Q96ED9 719 aa13□□□□□ -0.33
CSDE1-217ENST00000534699 SHTN1A0MZ66 631 aa12.99□□□□□ -0.33
CSDE1-217ENST00000534699 EYA2O00167 538 aa12.99□□□□□ -0.33
CSDE1-217ENST00000534699 MTX1Q13505 466 aa12.99□□□□□ -0.33
CSDE1-217ENST00000534699 PUM3Q15397 648 aaKnown RBP12.99□□□□□ -0.33
CSDE1-217ENST00000534699 TXNRD3Q86VQ6 643 aa12.99□□□□□ -0.33
CSDE1-217ENST00000534699 VGLL2Q8N8G2 317 aa12.99□□□□□ -0.33
CSDE1-217ENST00000534699 SUPT20HL1Q3ZLR7 823 aa12.99□□□□□ -0.33
CSDE1-217ENST00000534699 RBM26Q5T8P6 1007 aaKnown RBP12.99□□□□□ -0.33
CSDE1-217ENST00000534699 FKBP1CQ5VVH2 108 aa12.99□□□□□ -0.33
CSDE1-217ENST00000534699 CYP4F22Q6NT55 531 aa12.99□□□□□ -0.33
CSDE1-217ENST00000534699 CFHR5Q9BXR6 569 aa12.99□□□□□ -0.33
CSDE1-217ENST00000534699 FAM155AB1AL88 458 aaPredicted RBP12.98□□□□□ -0.33
CSDE1-217ENST00000534699 SLC5A1P13866 664 aa12.98□□□□□ -0.33
CSDE1-217ENST00000534699 FGFR2P21802 821 aa12.98□□□□□ -0.33
CSDE1-217ENST00000534699 LPIN2Q92539 896 aa12.98□□□□□ -0.33
CSDE1-217ENST00000534699 FAM84BQ96KN1 310 aaPredicted RBP12.98□□□□□ -0.33
CSDE1-217ENST00000534699 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
CSDE1-217ENST00000534699 RFX5P48382 616 aaPredicted RBP12.98□□□□□ -0.33
CSDE1-217ENST00000534699 INHBEP58166 350 aa12.98□□□□□ -0.33
CSDE1-217ENST00000534699 METTL24Q5JXM2 366 aa12.98□□□□□ -0.33
CSDE1-217ENST00000534699 COPRSQ9NQ92 184 aa12.98□□□□□ -0.33
CSDE1-217ENST00000534699 IL15P40933 162 aaPredicted RBP12.97□□□□□ -0.33
CSDE1-217ENST00000534699 RPAP1Q9BWH6 1393 aaPredicted RBP12.97□□□□□ -0.33
CSDE1-217ENST00000534699 SPDYE2BA6NHP3 402 aa12.97□□□□□ -0.33
CSDE1-217ENST00000534699 TAF5LO75529 589 aa12.97□□□□□ -0.33
CSDE1-217ENST00000534699 EGFRP00533 1210 aa12.97□□□□□ -0.33
CSDE1-217ENST00000534699 SPDYE6P0CI01 402 aa12.97□□□□□ -0.33
CSDE1-217ENST00000534699 TNNI2P48788 182 aa12.97□□□□□ -0.33
CSDE1-217ENST00000534699 PAXIP1Q6ZW49 1069 aaPredicted RBP12.97□□□□□ -0.33
CSDE1-217ENST00000534699 WDR66Q8TBY9 1149 aa12.97□□□□□ -0.33
CSDE1-217ENST00000534699 GNL3LQ9NVN8 582 aaKnown RBP12.97□□□□□ -0.33
CSDE1-217ENST00000534699 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
CSDE1-217ENST00000534699 SALL1Q9NSC2 1324 aa12.97□□□□□ -0.33
CSDE1-217ENST00000534699 MAP4K4O95819 1239 aaPredicted RBP12.96□□□□□ -0.33
CSDE1-217ENST00000534699 COL13A1Q5TAT6 717 aaPredicted RBP12.96□□□□□ -0.33
CSDE1-217ENST00000534699 CDCA7LQ96GN5 454 aa12.96□□□□□ -0.33
CSDE1-217ENST00000534699 MS4A1P11836 297 aa12.96□□□□□ -0.33
CSDE1-217ENST00000534699 ZNF157P51786 506 aaPredicted RBP12.96□□□□□ -0.33
CSDE1-217ENST00000534699 LDLRAD1Q5T700 205 aa12.96□□□□□ -0.33
CSDE1-217ENST00000534699 ZGPATQ8N5A5 531 aaKnown RBP12.96□□□□□ -0.33
CSDE1-217ENST00000534699 ZNF594Q96JF6 807 aaPredicted RBP12.96□□□□□ -0.33
CSDE1-217ENST00000534699 SREBF2Q12772 1141 aa12.96□□□□□ -0.34
CSDE1-217ENST00000534699 HHIPL2Q6UWX4 724 aa12.96□□□□□ -0.34
CSDE1-217ENST00000534699 VPS37DQ86XT2 251 aa12.96□□□□□ -0.34
CSDE1-217ENST00000534699 RASAL3Q86YV0 1011 aa12.96□□□□□ -0.34
CSDE1-217ENST00000534699 FBXW7Q969H0 707 aa12.96□□□□□ -0.34
CSDE1-217ENST00000534699 ZNF408Q9H9D4 720 aa12.96□□□□□ -0.34
CSDE1-217ENST00000534699 AKAP2Q9Y2D5 859 aa12.96□□□□□ -0.34
CSDE1-217ENST00000534699 ALDH1A1P00352 501 aa12.95□□□□□ -0.34
CSDE1-217ENST00000534699 KLRK1P26718 216 aa12.95□□□□□ -0.34
CSDE1-217ENST00000534699 TM4SF4P48230 202 aa12.95□□□□□ -0.34
CSDE1-217ENST00000534699 PTPN12Q05209 780 aaKnown RBP12.95□□□□□ -0.34
CSDE1-217ENST00000534699 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
CSDE1-217ENST00000534699 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
CSDE1-217ENST00000534699 CEP126Q9P2H0 1117 aa12.95□□□□□ -0.34
CSDE1-217ENST00000534699 NBPF9Q3BBW0 867 aa12.95□□□□□ -0.34
CSDE1-217ENST00000534699 KIAA0825Q8IV33 1275 aa12.95□□□□□ -0.34
CSDE1-217ENST00000534699 CERS5Q8N5B7 392 aa12.95□□□□□ -0.34
CSDE1-217ENST00000534699 HELBQ8NG08 1087 aaPredicted RBP12.95□□□□□ -0.34
CSDE1-217ENST00000534699 PPP1R12BO60237 982 aaPredicted RBP12.94□□□□□ -0.34
CSDE1-217ENST00000534699 ZBTB48P10074 688 aaPredicted RBP12.94□□□□□ -0.34
CSDE1-217ENST00000534699 FMR1Q06787 632 aaKnown RBP eCLIP12.94□□□□□ -0.341e-6■□□□□ 9.8
CSDE1-217ENST00000534699 TMED8Q6PL24 325 aaPredicted RBP12.94□□□□□ -0.34
CSDE1-217ENST00000534699 ATF7IPQ6VMQ6 1270 aa12.94□□□□□ -0.34
CSDE1-217ENST00000534699 ZBED9Q6R2W3 1325 aa12.94□□□□□ -0.34
CSDE1-217ENST00000534699 LBX1P52954 281 aa12.94□□□□□ -0.34
CSDE1-217ENST00000534699 MFSD14BQ5SR56 506 aa12.94□□□□□ -0.34
CSDE1-217ENST00000534699 FAM83AQ86UY5 434 aa12.94□□□□□ -0.34
CSDE1-217ENST00000534699 PUS3Q9BZE2 481 aaKnown RBP12.94□□□□□ -0.34
CSDE1-217ENST00000534699 DIEXFQ68CQ4 756 aaKnown RBP12.93□□□□□ -0.34
CSDE1-217ENST00000534699 ZDHHC15Q96MV8 337 aa12.93□□□□□ -0.34
CSDE1-217ENST00000534699 DENND2AQ9ULE3 1009 aa12.93□□□□□ -0.34
CSDE1-217ENST00000534699 MANSC4A6NHS7 340 aaPredicted RBP12.93□□□□□ -0.34
CSDE1-217ENST00000534699 IREB2P48200 963 aaKnown RBP12.93□□□□□ -0.34
CSDE1-217ENST00000534699 KIF23Q02241 960 aaPredicted RBP12.93□□□□□ -0.34
CSDE1-217ENST00000534699 ZKSCAN2Q63HK3 967 aa12.93□□□□□ -0.34
CSDE1-217ENST00000534699 SLF2Q8IX21 1173 aa12.93□□□□□ -0.34
CSDE1-217ENST00000534699 WTIPA6NIX2 430 aaPredicted RBP12.92□□□□□ -0.34
CSDE1-217ENST00000534699 PLIN1O60240 522 aa12.92□□□□□ -0.34
CSDE1-217ENST00000534699 AOC2O75106 756 aa12.92□□□□□ -0.34
CSDE1-217ENST00000534699 PKN2Q16513 984 aaKnown RBP12.92□□□□□ -0.34
CSDE1-217ENST00000534699 LRRC24Q50LG9 513 aa12.92□□□□□ -0.34
CSDE1-217ENST00000534699 ATG9AQ7Z3C6 839 aa12.92□□□□□ -0.34
CSDE1-217ENST00000534699 TEKT1Q969V4 418 aa12.92□□□□□ -0.34
CSDE1-217ENST00000534699 DEFB129Q9H1M3 183 aa12.92□□□□□ -0.34
CSDE1-217ENST00000534699 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms