RNA–Protein interactions for RNA: ENST00000533249.5

PKP3-210, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 1,111 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-210ENST00000533249 LDHAL6AQ6ZMR3 332 aa28.96■■■□□ 2.23
PKP3-210ENST00000533249 ARMC9Q7Z3E5 817 aa28.95■■■□□ 2.22
PKP3-210ENST00000533249 CNNM1Q9NRU3 951 aa28.95■■■□□ 2.22
PKP3-210ENST00000533249 JAG2Q9Y219 1238 aa28.95■■■□□ 2.22
PKP3-210ENST00000533249 PTPN12Q05209 780 aaKnown RBP28.94■■■□□ 2.22
PKP3-210ENST00000533249 PCDHAC2Q9Y5I4 1007 aa28.94■■■□□ 2.22
PKP3-210ENST00000533249 TBC1D8O95759 1140 aa28.93■■■□□ 2.22
PKP3-210ENST00000533249 IL1R1P14778 569 aa28.93■■■□□ 2.22
PKP3-210ENST00000533249 CTU1Q7Z7A3 348 aaKnown RBP28.93■■■□□ 2.22
PKP3-210ENST00000533249 ALDH1L1O75891 902 aa28.92■■■□□ 2.22
PKP3-210ENST00000533249 SRCIN1Q9C0H9 1055 aa28.92■■■□□ 2.22
PKP3-210ENST00000533249 DEFB129Q9H1M3 183 aa28.92■■■□□ 2.22
PKP3-210ENST00000533249 ANGEL1Q9UNK9 670 aaKnown RBP28.92■■■□□ 2.22
PKP3-210ENST00000533249 FZD1Q9UP38 647 aa28.92■■■□□ 2.22
PKP3-210ENST00000533249 CFAP100Q494V2 611 aa28.9■■■□□ 2.22
PKP3-210ENST00000533249 MTMR14Q8NCE2 650 aa28.9■■■□□ 2.22
PKP3-210ENST00000533249 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.9■■■□□ 2.22
PKP3-210ENST00000533249 COL1A1P02452 1464 aaPredicted RBP28.9■■■□□ 2.22
PKP3-210ENST00000533249 CLRN2A0PK11 232 aa28.89■■■□□ 2.22
PKP3-210ENST00000533249 TM4SF4P48230 202 aa28.89■■■□□ 2.22
PKP3-210ENST00000533249 SUCLG2Q96I99 432 aa28.89■■■□□ 2.22
PKP3-210ENST00000533249 ECM29Q5VYK3 1845 aa28.89■■■□□ 2.22
PKP3-210ENST00000533249 FKBP1AP62942 108 aaKnown RBP28.88■■■□□ 2.21
PKP3-210ENST00000533249 LDLRAD1Q5T700 205 aa28.88■■■□□ 2.21
PKP3-210ENST00000533249 SPDYE2BA6NHP3 402 aa28.87■■■□□ 2.21
PKP3-210ENST00000533249 MYO1BO43795 1136 aa28.87■■■□□ 2.21
PKP3-210ENST00000533249 SPDYE6P0CI01 402 aa28.87■■■□□ 2.21
PKP3-210ENST00000533249 RBM5P52756 815 aaKnown RBP eCLIP28.87■■■□□ 2.21
PKP3-210ENST00000533249 SREBF2Q12772 1141 aa28.87■■■□□ 2.21
PKP3-210ENST00000533249 ZNF296Q8WUU4 475 aaPredicted RBP28.87■■■□□ 2.21
PKP3-210ENST00000533249 PRMT6Q96LA8 375 aaPredicted RBP28.87■■■□□ 2.21
PKP3-210ENST00000533249 VEZTQ9HBM0 779 aa28.87■■■□□ 2.21
PKP3-210ENST00000533249 SOX10P56693 466 aa28.86■■■□□ 2.21
PKP3-210ENST00000533249 PUS3Q9BZE2 481 aaKnown RBP28.86■■■□□ 2.21
PKP3-210ENST00000533249 NBPF7P0C2Y1 421 aaPredicted RBP28.85■■■□□ 2.21
PKP3-210ENST00000533249 GYG1P46976 350 aa28.85■■■□□ 2.21
PKP3-210ENST00000533249 SPRYD7Q5W111 196 aa28.85■■■□□ 2.21
PKP3-210ENST00000533249 KAZALD1Q96I82 304 aa28.85■■■□□ 2.21
PKP3-210ENST00000533249 PPP2R3BQ9Y5P8 575 aa28.85■■■□□ 2.21
PKP3-210ENST00000533249 AOX1Q06278 1338 aa28.85■■■□□ 2.21
PKP3-210ENST00000533249 SSC5DA1L4H1 1573 aa28.84■■■□□ 2.21
PKP3-210ENST00000533249 UBE4AQ14139 1066 aa28.84■■■□□ 2.21
PKP3-210ENST00000533249 SLC10A4Q96EP9 437 aa28.84■■■□□ 2.21
PKP3-210ENST00000533249 GPR25O00155 361 aa28.83■■■□□ 2.21
PKP3-210ENST00000533249 PPP1R12BO60237 982 aaPredicted RBP28.83■■■□□ 2.21
PKP3-210ENST00000533249 FAM205AQ6ZU69 1335 aa28.83■■■□□ 2.21
PKP3-210ENST00000533249 HIBADHP31937 336 aaKnown RBP28.82■■■□□ 2.2
PKP3-210ENST00000533249 MFSD14BQ5SR56 506 aa28.82■■■□□ 2.2
PKP3-210ENST00000533249 TDRD7Q8NHU6 1098 aaKnown RBP28.82■■■□□ 2.2
PKP3-210ENST00000533249 CLMNQ96JQ2 1002 aa28.82■■■□□ 2.2
PKP3-210ENST00000533249 ZNF521Q96K83 1311 aa28.82■■■□□ 2.2
PKP3-210ENST00000533249 MAP3K11Q16584 847 aa28.81■■■□□ 2.2
PKP3-210ENST00000533249 SUPT20HL1Q3ZLR7 823 aa28.81■■■□□ 2.2
PKP3-210ENST00000533249 NBPF12Q5TAG4 269 aaPredicted RBP28.81■■■□□ 2.2
PKP3-210ENST00000533249 FAM84BQ96KN1 310 aaPredicted RBP28.81■■■□□ 2.2
PKP3-210ENST00000533249 BICC1Q9H694 974 aaKnown RBP28.81■■■□□ 2.2
PKP3-210ENST00000533249 MRPL50Q8N5N7 158 aaKnown RBP28.8■■■□□ 2.2
PKP3-210ENST00000533249 R3HDMLQ9H3Y0 253 aa28.8■■■□□ 2.2
PKP3-210ENST00000533249 TTF2Q9UNY4 1162 aaKnown RBP28.8■■■□□ 2.2
PKP3-210ENST00000533249 HPS5Q9UPZ3 1129 aa28.8■■■□□ 2.2
PKP3-210ENST00000533249 UTYO14607 1347 aa28.79■■■□□ 2.2
PKP3-210ENST00000533249 RASA3Q14644 834 aa28.79■■■□□ 2.2
PKP3-210ENST00000533249 RIPOR2Q9Y4F9 1068 aa28.79■■■□□ 2.2
PKP3-210ENST00000533249 MROH5Q6ZUA9 1318 aa28.78■■■□□ 2.2
PKP3-210ENST00000533249 PKN2Q16513 984 aaKnown RBP28.78■■■□□ 2.2
PKP3-210ENST00000533249 NOM1Q5C9Z4 860 aaKnown RBP28.78■■■□□ 2.2
PKP3-210ENST00000533249 WNK4Q96J92 1243 aa28.78■■■□□ 2.2
PKP3-210ENST00000533249 MANSC4A6NHS7 340 aaPredicted RBP28.77■■■□□ 2.2
PKP3-210ENST00000533249 FKTNO75072 461 aa28.76■■■□□ 2.19
PKP3-210ENST00000533249 IREB2P48200 963 aaKnown RBP28.76■■■□□ 2.19
PKP3-210ENST00000533249 RABL6Q3YEC7 729 aaPredicted RBP28.76■■■□□ 2.19
PKP3-210ENST00000533249 LRRC24Q50LG9 513 aa28.76■■■□□ 2.19
PKP3-210ENST00000533249 VPS37DQ86XT2 251 aa28.76■■■□□ 2.19
PKP3-210ENST00000533249 CFHR5Q9BXR6 569 aa28.76■■■□□ 2.19
PKP3-210ENST00000533249 TDRD3Q9H7E2 651 aaKnown RBP28.76■■■□□ 2.19
PKP3-210ENST00000533249 ZNF70Q9UC06 446 aaPredicted RBP28.76■■■□□ 2.19
PKP3-210ENST00000533249 SERPINA10Q9UK55 444 aa28.76■■■□□ 2.19
PKP3-210ENST00000533249 IQSEC3Q9UPP2 1182 aaPredicted RBP28.76■■■□□ 2.19
PKP3-210ENST00000533249 ARAP2Q8WZ64 1704 aa28.75■■■□□ 2.19
PKP3-210ENST00000533249 ALDH1A1P00352 501 aa28.75■■■□□ 2.19
PKP3-210ENST00000533249 ZBTB48P10074 688 aaPredicted RBP28.75■■■□□ 2.19
PKP3-210ENST00000533249 SPDYE2Q495Y8 402 aa28.75■■■□□ 2.19
PKP3-210ENST00000533249 METTL24Q5JXM2 366 aa28.75■■■□□ 2.19
PKP3-210ENST00000533249 ANKRD44Q8N8A2 993 aa28.75■■■□□ 2.19
PKP3-210ENST00000533249 USP2O75604 605 aaPredicted RBP28.74■■■□□ 2.19
PKP3-210ENST00000533249 INHBEP58166 350 aa28.74■■■□□ 2.19
PKP3-210ENST00000533249 CHAF1AQ13111 956 aaPredicted RBP28.74■■■□□ 2.19
PKP3-210ENST00000533249 TNFAIP1Q13829 316 aa28.74■■■□□ 2.19
PKP3-210ENST00000533249 IFNL1Q8IU54 200 aa28.74■■■□□ 2.19
PKP3-210ENST00000533249 PTPRCP08575 1304 aa28.73■■■□□ 2.19
PKP3-210ENST00000533249 DZIP1LQ8IYY4 767 aaKnown RBP28.73■■■□□ 2.19
PKP3-210ENST00000533249 UNCXA6NJT0 531 aa28.72■■■□□ 2.19
PKP3-210ENST00000533249 FRAT2O75474 233 aaPredicted RBP28.72■■■□□ 2.19
PKP3-210ENST00000533249 CRKP46108 304 aa28.72■■■□□ 2.19
PKP3-210ENST00000533249 FBXO33Q7Z6M2 555 aa28.72■■■□□ 2.19
PKP3-210ENST00000533249 KLHDC4Q8TBB5 520 aa28.72■■■□□ 2.19
PKP3-210ENST00000533249 SSH1Q8WYL5 1049 aa28.72■■■□□ 2.19
PKP3-210ENST00000533249 TCP10L2B9ZVM9 353 aa28.71■■■□□ 2.19
PKP3-210ENST00000533249 E9PSI1 815 aa28.71■■■□□ 2.19
PKP3-210ENST00000533249 IGF2BP3O00425 579 aaKnown RBP eCLIP28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms