RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CELF2O95319 508 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-212ENST00000533058 FGFR2P21802 821 aa16.1■□□□□ 0.17
TRAPPC4-212ENST00000533058 ATG9AQ7Z3C6 839 aa16.1■□□□□ 0.17
TRAPPC4-212ENST00000533058 SULF1Q8IWU6 871 aa16.1■□□□□ 0.17
TRAPPC4-212ENST00000533058 FBXW7Q969H0 707 aa16.1■□□□□ 0.17
TRAPPC4-212ENST00000533058 COPRSQ9NQ92 184 aa16.1■□□□□ 0.17
TRAPPC4-212ENST00000533058 GGA3Q9NZ52 723 aa16.1■□□□□ 0.17
TRAPPC4-212ENST00000533058 HDAC9Q9UKV0 1011 aa16.1■□□□□ 0.17
TRAPPC4-212ENST00000533058 ABT1Q9ULW3 272 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-212ENST00000533058 WNT10BO00744 389 aa16.09■□□□□ 0.17
TRAPPC4-212ENST00000533058 GNAI2P04899 355 aa16.09■□□□□ 0.17
TRAPPC4-212ENST00000533058 VEGFBP49765 207 aa16.09■□□□□ 0.17
TRAPPC4-212ENST00000533058 PUM3Q15397 648 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-212ENST00000533058 SAPCD2Q86UD0 394 aa16.09■□□□□ 0.17
TRAPPC4-212ENST00000533058 CERS5Q8N5B7 392 aa16.09■□□□□ 0.17
TRAPPC4-212ENST00000533058 MTMR14Q8NCE2 650 aa16.09■□□□□ 0.17
TRAPPC4-212ENST00000533058 ZBED3Q96IU2 234 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC4-212ENST00000533058 CHMP4BQ9H444 224 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-212ENST00000533058 ZNF646O15015 1829 aaPredicted RBP16.08■□□□□ 0.17
TRAPPC4-212ENST00000533058 IFIT1P09914 478 aaKnown RBP16.08■□□□□ 0.16
TRAPPC4-212ENST00000533058 IL15P40933 162 aaPredicted RBP16.08■□□□□ 0.16
TRAPPC4-212ENST00000533058 GYG1P46976 350 aa16.08■□□□□ 0.16
TRAPPC4-212ENST00000533058 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.16
TRAPPC4-212ENST00000533058 ANGEL2Q5VTE6 544 aaKnown RBP16.08■□□□□ 0.16
TRAPPC4-212ENST00000533058 KIAA0825Q8IV33 1275 aa16.08■□□□□ 0.16
TRAPPC4-212ENST00000533058 ZBTB22O15209 634 aa16.07■□□□□ 0.16
TRAPPC4-212ENST00000533058 ECE1P42892 770 aa16.07■□□□□ 0.16
TRAPPC4-212ENST00000533058 NBPF9Q3BBW0 867 aa16.07■□□□□ 0.16
TRAPPC4-212ENST00000533058 LPIN2Q92539 896 aa16.07■□□□□ 0.16
TRAPPC4-212ENST00000533058 C1orf115Q9H7X2 142 aa16.07■□□□□ 0.16
TRAPPC4-212ENST00000533058 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC4-212ENST00000533058 TRPM7Q96QT4 1865 aa16.07■□□□□ 0.16
TRAPPC4-212ENST00000533058 WDR33Q9C0J8 1336 aaKnown RBP16.06■□□□□ 0.16
TRAPPC4-212ENST00000533058 ADM5C9JUS6 153 aa16.06■□□□□ 0.16
TRAPPC4-212ENST00000533058 ZBTB7BO15156 539 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-212ENST00000533058 VPS37DQ86XT2 251 aa16.06■□□□□ 0.16
TRAPPC4-212ENST00000533058 CEP126Q9P2H0 1117 aa16.06■□□□□ 0.16
TRAPPC4-212ENST00000533058 SLC5A1P13866 664 aa16.05■□□□□ 0.16
TRAPPC4-212ENST00000533058 TBC1D22AQ8WUA7 517 aa16.05■□□□□ 0.16
TRAPPC4-212ENST00000533058 CRBNQ96SW2 442 aa16.05■□□□□ 0.16
TRAPPC4-212ENST00000533058 GBA2Q9HCG7 927 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-212ENST00000533058 SRGAP3O43295 1099 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 BCAMP50895 628 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 FKBP1BP68106 108 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 DLGAP5Q15398 846 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 MFSD14BQ5SR56 506 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 DLK2Q6UY11 383 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 C2orf69Q8N8R5 385 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 CDCA5Q96FF9 252 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 CAPNS2Q96L46 248 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
TRAPPC4-212ENST00000533058 HSPA1AP0DMV8 641 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-212ENST00000533058 HSPA1BP0DMV9 641 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-212ENST00000533058 MAP2K2P36507 400 aa16.03■□□□□ 0.16
TRAPPC4-212ENST00000533058 IRX6P78412 446 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-212ENST00000533058 MRIQ9BWK5 157 aa16.03■□□□□ 0.16
TRAPPC4-212ENST00000533058 SIL1Q9H173 461 aa16.03■□□□□ 0.16
TRAPPC4-212ENST00000533058 SERPINA10Q9UK55 444 aa16.03■□□□□ 0.16
TRAPPC4-212ENST00000533058 PA2G4Q9UQ80 394 aaKnown RBP16.03■□□□□ 0.16
TRAPPC4-212ENST00000533058 SUGT1Q9Y2Z0 365 aa16.03■□□□□ 0.16
TRAPPC4-212ENST00000533058 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
TRAPPC4-212ENST00000533058 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
TRAPPC4-212ENST00000533058 HDLBPQ00341 1268 aaKnown RBP16.02■□□□□ 0.16
TRAPPC4-212ENST00000533058 MAP2K1Q02750 393 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC4-212ENST00000533058 ATP2B3Q16720 1220 aa16.02■□□□□ 0.16
TRAPPC4-212ENST00000533058 CYP4F22Q6NT55 531 aa16.02■□□□□ 0.16
TRAPPC4-212ENST00000533058 APOBEC3FQ8IUX4 373 aaKnown RBP16.02■□□□□ 0.16
TRAPPC4-212ENST00000533058 WBP1LQ9NX94 342 aa16.02■□□□□ 0.16
TRAPPC4-212ENST00000533058 POLR2AP24928 1970 aaKnown RBP16.02■□□□□ 0.15
TRAPPC4-212ENST00000533058 FRAT2O75474 233 aaPredicted RBP16.01■□□□□ 0.15
TRAPPC4-212ENST00000533058 HUNKP57058 714 aa16.01■□□□□ 0.15
TRAPPC4-212ENST00000533058 CFAP100Q494V2 611 aa16.01■□□□□ 0.15
TRAPPC4-212ENST00000533058 ZBTB40Q9NUA8 1239 aa16.01■□□□□ 0.15
TRAPPC4-212ENST00000533058 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
TRAPPC4-212ENST00000533058 PCNTO95613 3336 aa16■□□□□ 0.15
TRAPPC4-212ENST00000533058 COL1A1P02452 1464 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-212ENST00000533058 F8W031 263 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-212ENST00000533058 SEMA3EO15041 775 aa16■□□□□ 0.15
TRAPPC4-212ENST00000533058 MYO1BO43795 1136 aa16■□□□□ 0.15
TRAPPC4-212ENST00000533058 PRMT6Q96LA8 375 aaPredicted RBP16■□□□□ 0.15
TRAPPC4-212ENST00000533058 GNL3LQ9NVN8 582 aaKnown RBP16■□□□□ 0.15
TRAPPC4-212ENST00000533058 TTF2Q9UNY4 1162 aaKnown RBP16■□□□□ 0.15
TRAPPC4-212ENST00000533058 AKAP2Q9Y2D5 859 aa16■□□□□ 0.15
TRAPPC4-212ENST00000533058 PPP2R3BQ9Y5P8 575 aa16■□□□□ 0.15
TRAPPC4-212ENST00000533058 PNMA6EA0A0J9YXQ4 647 aa15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 ATP8B2P98198 1209 aa15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 NOGQ13253 232 aa15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 POLA2Q14181 598 aa15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 RGMBQ6NW40 437 aa15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 PAXIP1Q6ZW49 1069 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 WDR66Q8TBY9 1149 aa15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 SSH3Q8TE77 659 aa15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 CCDC102AQ96A19 550 aa15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 IQSEC3Q9UPP2 1182 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC4-212ENST00000533058 NF2P35240 595 aa15.98■□□□□ 0.15
TRAPPC4-212ENST00000533058 CHAF1AQ13111 956 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC4-212ENST00000533058 CEP85Q6P2H3 762 aa15.98■□□□□ 0.15
TRAPPC4-212ENST00000533058 DEFB129Q9H1M3 183 aa15.98■□□□□ 0.15
TRAPPC4-212ENST00000533058 THSD7BQ9C0I4 1608 aa15.97■□□□□ 0.15
TRAPPC4-212ENST00000533058 MAST3O60307 1309 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms