RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 IL1R1P14778 569 aa21.65■■□□□ 1.06
RPUSD4-207ENST00000532800 LDHAL6AQ6ZMR3 332 aa21.65■■□□□ 1.06
RPUSD4-207ENST00000532800 ZNF804AQ7Z570 1209 aa21.65■■□□□ 1.06
RPUSD4-207ENST00000532800 CNNM1Q9NRU3 951 aa21.65■■□□□ 1.06
RPUSD4-207ENST00000532800 FZD1Q9UP38 647 aa21.65■■□□□ 1.06
RPUSD4-207ENST00000532800 ZNF521Q96K83 1311 aa21.64■■□□□ 1.05
RPUSD4-207ENST00000532800 ALDH1L1O75891 902 aa21.64■■□□□ 1.05
RPUSD4-207ENST00000532800 MLLT1Q03111 559 aaPredicted RBP21.64■■□□□ 1.05
RPUSD4-207ENST00000532800 PTPN12Q05209 780 aaKnown RBP21.64■■□□□ 1.05
RPUSD4-207ENST00000532800 DLGAP5Q15398 846 aa21.64■■□□□ 1.05
RPUSD4-207ENST00000532800 SUCLG2Q96I99 432 aa21.64■■□□□ 1.05
RPUSD4-207ENST00000532800 SRCIN1Q9C0H9 1055 aa21.64■■□□□ 1.05
RPUSD4-207ENST00000532800 COL1A1P02452 1464 aaPredicted RBP21.64■■□□□ 1.05
RPUSD4-207ENST00000532800 AOX1Q06278 1338 aa21.63■■□□□ 1.05
RPUSD4-207ENST00000532800 SSC5DA1L4H1 1573 aa21.63■■□□□ 1.05
RPUSD4-207ENST00000532800 KAZALD1Q96I82 304 aa21.63■■□□□ 1.05
RPUSD4-207ENST00000532800 CFAP100Q494V2 611 aa21.62■■□□□ 1.05
RPUSD4-207ENST00000532800 ARMC9Q7Z3E5 817 aa21.62■■□□□ 1.05
RPUSD4-207ENST00000532800 MTMR14Q8NCE2 650 aa21.62■■□□□ 1.05
RPUSD4-207ENST00000532800 DEFB129Q9H1M3 183 aa21.62■■□□□ 1.05
RPUSD4-207ENST00000532800 CLRN2A0PK11 232 aa21.61■■□□□ 1.05
RPUSD4-207ENST00000532800 TBC1D8O95759 1140 aa21.61■■□□□ 1.05
RPUSD4-207ENST00000532800 NBPF7P0C2Y1 421 aaPredicted RBP21.61■■□□□ 1.05
RPUSD4-207ENST00000532800 PUS3Q9BZE2 481 aaKnown RBP21.61■■□□□ 1.05
RPUSD4-207ENST00000532800 ANGEL1Q9UNK9 670 aaKnown RBP21.61■■□□□ 1.05
RPUSD4-207ENST00000532800 SPDYE2BA6NHP3 402 aa21.6■■□□□ 1.05
RPUSD4-207ENST00000532800 SPDYE6P0CI01 402 aa21.6■■□□□ 1.05
RPUSD4-207ENST00000532800 FKBP1AP62942 108 aaKnown RBP21.6■■□□□ 1.05
RPUSD4-207ENST00000532800 CTU1Q7Z7A3 348 aaKnown RBP21.6■■□□□ 1.05
RPUSD4-207ENST00000532800 ARAP2Q8WZ64 1704 aa21.6■■□□□ 1.05
RPUSD4-207ENST00000532800 TM4SF4P48230 202 aa21.59■■□□□ 1.05
RPUSD4-207ENST00000532800 LDLRAD1Q5T700 205 aa21.59■■□□□ 1.05
RPUSD4-207ENST00000532800 PRMT6Q96LA8 375 aaPredicted RBP21.59■■□□□ 1.05
RPUSD4-207ENST00000532800 TNRC18O15417 2968 aaPredicted RBP21.58■■□□□ 1.05
RPUSD4-207ENST00000532800 GYG1P46976 350 aa21.58■■□□□ 1.05
RPUSD4-207ENST00000532800 MRPL50Q8N5N7 158 aaKnown RBP21.58■■□□□ 1.05
RPUSD4-207ENST00000532800 ZNF296Q8WUU4 475 aaPredicted RBP21.58■■□□□ 1.05
RPUSD4-207ENST00000532800 VEZTQ9HBM0 779 aa21.58■■□□□ 1.05
RPUSD4-207ENST00000532800 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.58■■□□□ 1.05
RPUSD4-207ENST00000532800 UTYO14607 1347 aa21.57■■□□□ 1.04
RPUSD4-207ENST00000532800 FAM205AQ6ZU69 1335 aa21.57■■□□□ 1.04
RPUSD4-207ENST00000532800 UBE4AQ14139 1066 aa21.57■■□□□ 1.04
RPUSD4-207ENST00000532800 SPRYD7Q5W111 196 aa21.57■■□□□ 1.04
RPUSD4-207ENST00000532800 TDRD7Q8NHU6 1098 aaKnown RBP21.57■■□□□ 1.04
RPUSD4-207ENST00000532800 BICC1Q9H694 974 aaKnown RBP21.57■■□□□ 1.04
RPUSD4-207ENST00000532800 MYO1BO43795 1136 aa21.56■■□□□ 1.04
RPUSD4-207ENST00000532800 RBM5P52756 815 aaKnown RBP eCLIP21.56■■□□□ 1.04
RPUSD4-207ENST00000532800 SOX10P56693 466 aa21.56■■□□□ 1.04
RPUSD4-207ENST00000532800 SREBF2Q12772 1141 aa21.56■■□□□ 1.04
RPUSD4-207ENST00000532800 CLMNQ96JQ2 1002 aa21.56■■□□□ 1.04
RPUSD4-207ENST00000532800 FAM84BQ96KN1 310 aaPredicted RBP21.56■■□□□ 1.04
RPUSD4-207ENST00000532800 RIPOR2Q9Y4F9 1068 aa21.56■■□□□ 1.04
RPUSD4-207ENST00000532800 PPP2R3BQ9Y5P8 575 aa21.56■■□□□ 1.04
RPUSD4-207ENST00000532800 HIBADHP31937 336 aaKnown RBP21.55■■□□□ 1.04
RPUSD4-207ENST00000532800 MAP3K11Q16584 847 aa21.55■■□□□ 1.04
RPUSD4-207ENST00000532800 RABL6Q3YEC7 729 aaPredicted RBP21.55■■□□□ 1.04
RPUSD4-207ENST00000532800 MFSD14BQ5SR56 506 aa21.55■■□□□ 1.04
RPUSD4-207ENST00000532800 NBPF12Q5TAG4 269 aaPredicted RBP21.55■■□□□ 1.04
RPUSD4-207ENST00000532800 ANKRD44Q8N8A2 993 aa21.55■■□□□ 1.04
RPUSD4-207ENST00000532800 R3HDMLQ9H3Y0 253 aa21.55■■□□□ 1.04
RPUSD4-207ENST00000532800 LAMB1P07942 1786 aa21.55■■□□□ 1.04
RPUSD4-207ENST00000532800 OTOFQ9HC10 1997 aa21.54■■□□□ 1.04
RPUSD4-207ENST00000532800 GPR25O00155 361 aa21.54■■□□□ 1.04
RPUSD4-207ENST00000532800 LRRC24Q50LG9 513 aa21.54■■□□□ 1.04
RPUSD4-207ENST00000532800 TTF2Q9UNY4 1162 aaKnown RBP21.53■■□□□ 1.04
RPUSD4-207ENST00000532800 IQSEC3Q9UPP2 1182 aaPredicted RBP21.53■■□□□ 1.04
RPUSD4-207ENST00000532800 MROH5Q6ZUA9 1318 aa21.53■■□□□ 1.04
RPUSD4-207ENST00000532800 PPP1R12BO60237 982 aaPredicted RBP21.52■■□□□ 1.04
RPUSD4-207ENST00000532800 RASA3Q14644 834 aa21.52■■□□□ 1.04
RPUSD4-207ENST00000532800 KLHDC4Q8TBB5 520 aa21.52■■□□□ 1.04
RPUSD4-207ENST00000532800 SSH1Q8WYL5 1049 aa21.52■■□□□ 1.04
RPUSD4-207ENST00000532800 SLC10A4Q96EP9 437 aa21.52■■□□□ 1.04
RPUSD4-207ENST00000532800 WNK4Q96J92 1243 aa21.52■■□□□ 1.04
RPUSD4-207ENST00000532800 HPS5Q9UPZ3 1129 aa21.52■■□□□ 1.04
RPUSD4-207ENST00000532800 PTPRCP08575 1304 aa21.52■■□□□ 1.03
RPUSD4-207ENST00000532800 GRIK5Q16478 980 aa21.51■■□□□ 1.03
RPUSD4-207ENST00000532800 SUPT20HL1Q3ZLR7 823 aa21.51■■□□□ 1.03
RPUSD4-207ENST00000532800 SPDYE2Q495Y8 402 aa21.51■■□□□ 1.03
RPUSD4-207ENST00000532800 METTL24Q5JXM2 366 aa21.51■■□□□ 1.03
RPUSD4-207ENST00000532800 TDRD3Q9H7E2 651 aaKnown RBP21.51■■□□□ 1.03
RPUSD4-207ENST00000532800 ZNF70Q9UC06 446 aaPredicted RBP21.51■■□□□ 1.03
RPUSD4-207ENST00000532800 E9PSI1 815 aa21.5■■□□□ 1.03
RPUSD4-207ENST00000532800 NOM1Q5C9Z4 860 aaKnown RBP21.5■■□□□ 1.03
RPUSD4-207ENST00000532800 FBXO33Q7Z6M2 555 aa21.5■■□□□ 1.03
RPUSD4-207ENST00000532800 CDAN1Q8IWY9 1227 aa21.5■■□□□ 1.03
RPUSD4-207ENST00000532800 VGLL2Q8N8G2 317 aa21.5■■□□□ 1.03
RPUSD4-207ENST00000532800 CFHR5Q9BXR6 569 aa21.5■■□□□ 1.03
RPUSD4-207ENST00000532800 SERPINA10Q9UK55 444 aa21.5■■□□□ 1.03
RPUSD4-207ENST00000532800 MANSC4A6NHS7 340 aaPredicted RBP21.49■■□□□ 1.03
RPUSD4-207ENST00000532800 USP2O75604 605 aaPredicted RBP21.49■■□□□ 1.03
RPUSD4-207ENST00000532800 GJA5P36382 358 aa21.49■■□□□ 1.03
RPUSD4-207ENST00000532800 CRKP46108 304 aa21.49■■□□□ 1.03
RPUSD4-207ENST00000532800 CHAF1AQ13111 956 aaPredicted RBP21.49■■□□□ 1.03
RPUSD4-207ENST00000532800 DZIP1LQ8IYY4 767 aaKnown RBP21.49■■□□□ 1.03
RPUSD4-207ENST00000532800 IGF2BP3O00425 579 aaKnown RBP eCLIP21.48■■□□□ 1.03
RPUSD4-207ENST00000532800 ZBTB48P10074 688 aaPredicted RBP21.48■■□□□ 1.03
RPUSD4-207ENST00000532800 PKN2Q16513 984 aaKnown RBP21.48■■□□□ 1.03
RPUSD4-207ENST00000532800 VPS37DQ86XT2 251 aa21.48■■□□□ 1.03
RPUSD4-207ENST00000532800 IFNL1Q8IU54 200 aa21.48■■□□□ 1.03
RPUSD4-207ENST00000532800 USP44Q9H0E7 712 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms