RNA–Protein interactions for RNA: ENST00000531542.1

AMBRA1-210, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-210ENST00000531542 ZNF594Q96JF6 807 aaPredicted RBP16.82■□□□□ 0.28
AMBRA1-210ENST00000531542 RIPOR2Q9Y4F9 1068 aa16.82■□□□□ 0.28
AMBRA1-210ENST00000531542 PPP2R3BQ9Y5P8 575 aa16.82■□□□□ 0.28
AMBRA1-210ENST00000531542 MROH5Q6ZUA9 1318 aa16.81■□□□□ 0.28
AMBRA1-210ENST00000531542 UNCXA6NJT0 531 aa16.81■□□□□ 0.28
AMBRA1-210ENST00000531542 UBE2Q2LH0YL09 131 aa16.81■□□□□ 0.28
AMBRA1-210ENST00000531542 SLFN5Q08AF3 891 aa16.81■□□□□ 0.28
AMBRA1-210ENST00000531542 LDLRAD1Q5T700 205 aa16.81■□□□□ 0.28
AMBRA1-210ENST00000531542 PRAMEF18Q5VWM3 479 aa16.81■□□□□ 0.28
AMBRA1-210ENST00000531542 TDRD7Q8NHU6 1098 aaKnown RBP16.81■□□□□ 0.28
AMBRA1-210ENST00000531542 SUCLG2Q96I99 432 aa16.81■□□□□ 0.28
AMBRA1-210ENST00000531542 MCOLN1Q9GZU1 580 aa16.81■□□□□ 0.28
AMBRA1-210ENST00000531542 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 TRPA1O75762 1119 aa16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 TM4SF4P48230 202 aa16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 MAP3K11Q16584 847 aa16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 ALDH1L2Q3SY69 923 aa16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 MOB2Q70IA6 237 aa16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 ARMC9Q7Z3E5 817 aa16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 DEFB129Q9H1M3 183 aa16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 SCAF8Q9UPN6 1271 aaKnown RBP16.8■□□□□ 0.28
AMBRA1-210ENST00000531542 MYO1BO43795 1136 aa16.79■□□□□ 0.28
AMBRA1-210ENST00000531542 HIBADHP31937 336 aaKnown RBP16.79■□□□□ 0.28
AMBRA1-210ENST00000531542 NOM1Q5C9Z4 860 aaKnown RBP16.79■□□□□ 0.28
AMBRA1-210ENST00000531542 TRMT2AQ8IZ69 625 aaKnown RBP16.79■□□□□ 0.28
AMBRA1-210ENST00000531542 FAM84BQ96KN1 310 aaPredicted RBP16.79■□□□□ 0.28
AMBRA1-210ENST00000531542 CT47B1P0C2W7 299 aaPredicted RBP16.78■□□□□ 0.28
AMBRA1-210ENST00000531542 DGKZQ13574 1117 aa16.78■□□□□ 0.28
AMBRA1-210ENST00000531542 ANKRD44Q8N8A2 993 aa16.78■□□□□ 0.28
AMBRA1-210ENST00000531542 SSH1Q8WYL5 1049 aa16.78■□□□□ 0.28
AMBRA1-210ENST00000531542 CFHR5Q9BXR6 569 aa16.78■□□□□ 0.28
AMBRA1-210ENST00000531542 PUS3Q9BZE2 481 aaKnown RBP16.78■□□□□ 0.28
AMBRA1-210ENST00000531542 BICC1Q9H694 974 aaKnown RBP16.78■□□□□ 0.28
AMBRA1-210ENST00000531542 PLIN1O60240 522 aa16.77■□□□□ 0.28
AMBRA1-210ENST00000531542 TTLL12Q14166 644 aaPredicted RBP16.77■□□□□ 0.28
AMBRA1-210ENST00000531542 CFAP100Q494V2 611 aa16.77■□□□□ 0.28
AMBRA1-210ENST00000531542 FBXO33Q7Z6M2 555 aa16.77■□□□□ 0.28
AMBRA1-210ENST00000531542 PRMT6Q96LA8 375 aaPredicted RBP16.77■□□□□ 0.28
AMBRA1-210ENST00000531542 USP44Q9H0E7 712 aa16.77■□□□□ 0.28
AMBRA1-210ENST00000531542 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.28
AMBRA1-210ENST00000531542 KIF16BQ96L93 1317 aa16.76■□□□□ 0.27
AMBRA1-210ENST00000531542 CCDC85CA6NKD9 419 aa16.76■□□□□ 0.27
AMBRA1-210ENST00000531542 PTPN12Q05209 780 aaKnown RBP16.76■□□□□ 0.27
AMBRA1-210ENST00000531542 SREBF2Q12772 1141 aa16.76■□□□□ 0.27
AMBRA1-210ENST00000531542 SUPT20HL1Q3ZLR7 823 aa16.76■□□□□ 0.27
AMBRA1-210ENST00000531542 A0A1B0GUL6 1792 aa16.76■□□□□ 0.27
AMBRA1-210ENST00000531542 PPP1R12BO60237 982 aaPredicted RBP16.75■□□□□ 0.27
AMBRA1-210ENST00000531542 PDE8BO95263 885 aa16.75■□□□□ 0.27
AMBRA1-210ENST00000531542 GYG1P46976 350 aa16.75■□□□□ 0.27
AMBRA1-210ENST00000531542 INHBEP58166 350 aa16.75■□□□□ 0.27
AMBRA1-210ENST00000531542 MFSD14BQ5SR56 506 aa16.75■□□□□ 0.27
AMBRA1-210ENST00000531542 VGLL2Q8N8G2 317 aa16.75■□□□□ 0.27
AMBRA1-210ENST00000531542 CASP8AP2Q9UKL3 1982 aa16.75■□□□□ 0.27
AMBRA1-210ENST00000531542 F8W031 263 aaPredicted RBP16.74■□□□□ 0.27
AMBRA1-210ENST00000531542 HDLBPQ00341 1268 aaKnown RBP16.74■□□□□ 0.27
AMBRA1-210ENST00000531542 TNFAIP1Q13829 316 aa16.74■□□□□ 0.27
AMBRA1-210ENST00000531542 SPRYD7Q5W111 196 aa16.74■□□□□ 0.27
AMBRA1-210ENST00000531542 TBC1D22AQ8WUA7 517 aa16.74■□□□□ 0.27
AMBRA1-210ENST00000531542 MRIQ9BWK5 157 aa16.74■□□□□ 0.27
AMBRA1-210ENST00000531542 ANGEL1Q9UNK9 670 aaKnown RBP16.74■□□□□ 0.27
AMBRA1-210ENST00000531542 PCDHAC2Q9Y5I4 1007 aa16.74■□□□□ 0.27
AMBRA1-210ENST00000531542 ZBTB48P10074 688 aaPredicted RBP16.73■□□□□ 0.27
AMBRA1-210ENST00000531542 PKN2Q16513 984 aaKnown RBP16.73■□□□□ 0.27
AMBRA1-210ENST00000531542 SPDYE2Q495Y8 402 aa16.73■□□□□ 0.27
AMBRA1-210ENST00000531542 LRRC24Q50LG9 513 aa16.73■□□□□ 0.27
AMBRA1-210ENST00000531542 CAVIN4Q5BKX8 364 aa16.73■□□□□ 0.27
AMBRA1-210ENST00000531542 CTU1Q7Z7A3 348 aaKnown RBP16.73■□□□□ 0.27
AMBRA1-210ENST00000531542 CCER2I3L3R5 266 aa16.72■□□□□ 0.27
AMBRA1-210ENST00000531542 ALDH1A1P00352 501 aa16.72■□□□□ 0.27
AMBRA1-210ENST00000531542 RASA3Q14644 834 aa16.72■□□□□ 0.27
AMBRA1-210ENST00000531542 METTL24Q5JXM2 366 aa16.72■□□□□ 0.27
AMBRA1-210ENST00000531542 FBXO3Q9UK99 471 aa16.72■□□□□ 0.27
AMBRA1-210ENST00000531542 TTF2Q9UNY4 1162 aaKnown RBP16.72■□□□□ 0.27
AMBRA1-210ENST00000531542 SUGT1Q9Y2Z0 365 aa16.72■□□□□ 0.27
AMBRA1-210ENST00000531542 AKAP11Q9UKA4 1901 aa16.72■□□□□ 0.27
AMBRA1-210ENST00000531542 SSC5DA1L4H1 1573 aa16.72■□□□□ 0.27
AMBRA1-210ENST00000531542 CLRN2A0PK11 232 aa16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 MANSC4A6NHS7 340 aaPredicted RBP16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 FGFR2P21802 821 aa16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 RFX5P48382 616 aaPredicted RBP16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 RBM5P52756 815 aaKnown RBP eCLIP16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 MLLT1Q03111 559 aaPredicted RBP16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 VPS37DQ86XT2 251 aa16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 SLC10A4Q96EP9 437 aa16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 CDCA7LQ96GN5 454 aa16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 ZNF70Q9UC06 446 aaPredicted RBP16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 JAG2Q9Y219 1238 aa16.71■□□□□ 0.27
AMBRA1-210ENST00000531542 PRKG1Q13976 671 aa16.7■□□□□ 0.26
AMBRA1-210ENST00000531542 PUM3Q15397 648 aaKnown RBP16.7■□□□□ 0.26
AMBRA1-210ENST00000531542 NBPF12Q5TAG4 269 aaPredicted RBP16.7■□□□□ 0.26
AMBRA1-210ENST00000531542 VEZTQ9HBM0 779 aa16.7■□□□□ 0.26
AMBRA1-210ENST00000531542 SMC4Q9NTJ3 1288 aa16.7■□□□□ 0.26
AMBRA1-210ENST00000531542 HDAC5Q9UQL6 1122 aa16.7■□□□□ 0.26
AMBRA1-210ENST00000531542 AOX1Q06278 1338 aa16.7■□□□□ 0.26
AMBRA1-210ENST00000531542 GPR25O00155 361 aa16.69■□□□□ 0.26
AMBRA1-210ENST00000531542 EYA2O00167 538 aa16.69■□□□□ 0.26
AMBRA1-210ENST00000531542 ZBTB22O15209 634 aa16.69■□□□□ 0.26
AMBRA1-210ENST00000531542 USP2O75604 605 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms