RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 GYG1P46976 350 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 RFX5P48382 616 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-221ENST00000531068 HUNKP57058 714 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 FKBP1BP68106 108 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 PTPN12Q05209 780 aaKnown RBP13.69□□□□□ -0.22
CAPN1-221ENST00000531068 GRM1Q13255 1194 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 NBPF9Q3BBW0 867 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 ZKSCAN2Q63HK3 967 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 CYP4F22Q6NT55 531 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 FBXO33Q7Z6M2 555 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 KLHDC4Q8TBB5 520 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 BEGAINQ9BUH8 593 aa13.69□□□□□ -0.22
CAPN1-221ENST00000531068 ASTN2O75129 1339 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-221ENST00000531068 FRAT2O75474 233 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-221ENST00000531068 CIAO1O76071 339 aa13.68□□□□□ -0.22
CAPN1-221ENST00000531068 CTCFP49711 727 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-221ENST00000531068 PUM3Q15397 648 aaKnown RBP13.68□□□□□ -0.22
CAPN1-221ENST00000531068 DLK2Q6UY11 383 aa13.68□□□□□ -0.22
CAPN1-221ENST00000531068 CERS5Q8N5B7 392 aa13.68□□□□□ -0.22
CAPN1-221ENST00000531068 VGLL2Q8N8G2 317 aa13.68□□□□□ -0.22
CAPN1-221ENST00000531068 MTMR14Q8NCE2 650 aa13.68□□□□□ -0.22
CAPN1-221ENST00000531068 CCDC102AQ96A19 550 aa13.68□□□□□ -0.22
CAPN1-221ENST00000531068 CEP126Q9P2H0 1117 aa13.68□□□□□ -0.22
CAPN1-221ENST00000531068 LRRFIP2Q9Y608 721 aaKnown RBP13.68□□□□□ -0.22
CAPN1-221ENST00000531068 MYO1BO43795 1136 aa13.67□□□□□ -0.22
CAPN1-221ENST00000531068 TRIM27P14373 513 aa13.67□□□□□ -0.22
CAPN1-221ENST00000531068 NF2P35240 595 aa13.67□□□□□ -0.22
CAPN1-221ENST00000531068 NOGQ13253 232 aa13.67□□□□□ -0.22
CAPN1-221ENST00000531068 RGMBQ6NW40 437 aa13.67□□□□□ -0.22
CAPN1-221ENST00000531068 APOBEC3FQ8IUX4 373 aaKnown RBP13.67□□□□□ -0.22
CAPN1-221ENST00000531068 TBC1D22AQ8WUA7 517 aa13.67□□□□□ -0.22
CAPN1-221ENST00000531068 LPIN2Q92539 896 aa13.67□□□□□ -0.22
CAPN1-221ENST00000531068 MEIS3Q99687 375 aa13.67□□□□□ -0.22
CAPN1-221ENST00000531068 F8W031 263 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-221ENST00000531068 SLC5A1P13866 664 aa13.66□□□□□ -0.22
CAPN1-221ENST00000531068 IL15P40933 162 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-221ENST00000531068 MFSD14BQ5SR56 506 aa13.66□□□□□ -0.22
CAPN1-221ENST00000531068 ZBED3Q96IU2 234 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-221ENST00000531068 FOXN1O15353 648 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 CA12O43570 354 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 GNAI2P04899 355 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 FGFR2P21802 821 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 BCAMP50895 628 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 ZNF157P51786 506 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-221ENST00000531068 RBM5P52756 815 aaKnown RBP eCLIP13.65□□□□□ -0.22
CAPN1-221ENST00000531068 CFAP100Q494V2 611 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 COL13A1Q5TAT6 717 aaPredicted RBP13.65□□□□□ -0.22
CAPN1-221ENST00000531068 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 ATG9AQ7Z3C6 839 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 CLUAP1Q96AJ1 413 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 COPRSQ9NQ92 184 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 PRDM10Q9NQV6 1147 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 SERPINA10Q9UK55 444 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 JAG2Q9Y219 1238 aa13.65□□□□□ -0.22
CAPN1-221ENST00000531068 SRGAP3O43295 1099 aa13.64□□□□□ -0.23
CAPN1-221ENST00000531068 RRP1P56182 461 aaKnown RBP13.64□□□□□ -0.23
CAPN1-221ENST00000531068 MTX1Q13505 466 aa13.64□□□□□ -0.23
CAPN1-221ENST00000531068 MRIQ9BWK5 157 aa13.64□□□□□ -0.23
CAPN1-221ENST00000531068 SIL1Q9H173 461 aa13.64□□□□□ -0.23
CAPN1-221ENST00000531068 GNL3LQ9NVN8 582 aaKnown RBP13.64□□□□□ -0.23
CAPN1-221ENST00000531068 TTF2Q9UNY4 1162 aaKnown RBP13.64□□□□□ -0.23
CAPN1-221ENST00000531068 SUGT1Q9Y2Z0 365 aa13.64□□□□□ -0.23
CAPN1-221ENST00000531068 PPP2R3BQ9Y5P8 575 aa13.64□□□□□ -0.23
CAPN1-221ENST00000531068 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
CAPN1-221ENST00000531068 AOC2O75106 756 aa13.63□□□□□ -0.23
CAPN1-221ENST00000531068 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
CAPN1-221ENST00000531068 HDLBPQ00341 1268 aaKnown RBP13.63□□□□□ -0.23
CAPN1-221ENST00000531068 CHAF1AQ13111 956 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-221ENST00000531068 TTLL12Q14166 644 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-221ENST00000531068 ATP2B3Q16720 1220 aa13.63□□□□□ -0.23
CAPN1-221ENST00000531068 FTSJ3Q8IY81 847 aaKnown RBP13.63□□□□□ -0.23
CAPN1-221ENST00000531068 PRMT6Q96LA8 375 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-221ENST00000531068 DEFB129Q9H1M3 183 aa13.63□□□□□ -0.23
CAPN1-221ENST00000531068 IQSEC3Q9UPP2 1182 aaPredicted RBP13.63□□□□□ -0.23
CAPN1-221ENST00000531068 SUPT20HL1Q3ZLR7 823 aa13.62□□□□□ -0.23
CAPN1-221ENST00000531068 PRAMEF18Q5VWM3 479 aa13.62□□□□□ -0.23
CAPN1-221ENST00000531068 ARMC9Q7Z3E5 817 aa13.62□□□□□ -0.23
CAPN1-221ENST00000531068 REM2Q8IYK8 340 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-221ENST00000531068 DZIP1LQ8IYY4 767 aaKnown RBP13.62□□□□□ -0.23
CAPN1-221ENST00000531068 WDR66Q8TBY9 1149 aa13.62□□□□□ -0.23
CAPN1-221ENST00000531068 SCAF8Q9UPN6 1271 aaKnown RBP13.62□□□□□ -0.23
CAPN1-221ENST00000531068 AKAP2Q9Y2D5 859 aa13.62□□□□□ -0.23
CAPN1-221ENST00000531068 MYH3P11055 1940 aa13.61□□□□□ -0.23
CAPN1-221ENST00000531068 MS4A1P11836 297 aa13.61□□□□□ -0.23
CAPN1-221ENST00000531068 TNFAIP1Q13829 316 aa13.61□□□□□ -0.23
CAPN1-221ENST00000531068 TNS4Q8IZW8 715 aa13.61□□□□□ -0.23
CAPN1-221ENST00000531068 TMEM57Q8N5G2 664 aa13.61□□□□□ -0.23
CAPN1-221ENST00000531068 PA2G4Q9UQ80 394 aaKnown RBP13.61□□□□□ -0.23
CAPN1-221ENST00000531068 SCN9AQ15858 1988 aa13.6□□□□□ -0.23
CAPN1-221ENST00000531068 FAM155AB1AL88 458 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-221ENST00000531068 UBE2Q2LH0YL09 131 aa13.6□□□□□ -0.23
CAPN1-221ENST00000531068 SEMA3EO15041 775 aa13.6□□□□□ -0.23
CAPN1-221ENST00000531068 SLC10A3P09131 477 aa13.6□□□□□ -0.23
CAPN1-221ENST00000531068 CRKP46108 304 aa13.6□□□□□ -0.23
CAPN1-221ENST00000531068 LBX1P52954 281 aa13.6□□□□□ -0.23
CAPN1-221ENST00000531068 G3BP1Q13283 466 aaKnown RBP eCLIP13.6□□□□□ -0.23
CAPN1-221ENST00000531068 TEKT1Q969V4 418 aa13.6□□□□□ -0.23
CAPN1-221ENST00000531068 VEZTQ9HBM0 779 aa13.6□□□□□ -0.23
CAPN1-221ENST00000531068 TNNQ9UQP3 1299 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms