RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 RSBN1LQ6PCB5 846 aaPredicted RBP5.93□□□□□ -1.46
SSBP3-213ENST00000530618 KRT26Q7Z3Y9 468 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 TXNRD3Q86VQ6 643 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 RASAL3Q86YV0 1011 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 ERC1Q8IUD2 1116 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 CDAN1Q8IWY9 1227 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 RPAP2Q8IXW5 612 aaPredicted RBP5.93□□□□□ -1.46
SSBP3-213ENST00000530618 TTLL11Q8NHH1 800 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 PANK1Q8TE04 598 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 CNKSR2Q8WXI2 1034 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 CDCA5Q96FF9 252 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 ZBED3Q96IU2 234 aaPredicted RBP5.93□□□□□ -1.46
SSBP3-213ENST00000530618 MXD3Q9BW11 206 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 RWDD1Q9H446 243 aaPredicted RBP5.93□□□□□ -1.46
SSBP3-213ENST00000530618 GBA2Q9HCG7 927 aaPredicted RBP5.93□□□□□ -1.46
SSBP3-213ENST00000530618 GGA3Q9NZ52 723 aa5.93□□□□□ -1.46
SSBP3-213ENST00000530618 ZSWIM8A7E2V4 1837 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 MYH13Q9UKX3 1938 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 ANKRD18BA2A2Z9 1011 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 C6orf229H3BNL8 230 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 H7C1D1 291 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 H7C1W4 665 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 CA12O43570 354 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 UFL1O94874 794 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 CTSWP56202 376 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 KIF23Q02241 960 aaPredicted RBP5.92□□□□□ -1.46
SSBP3-213ENST00000530618 OS9Q13438 667 aaPredicted RBP5.92□□□□□ -1.46
SSBP3-213ENST00000530618 DACT2Q5SW24 774 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 RGMBQ6NW40 437 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 PAXIP1Q6ZW49 1069 aaPredicted RBP5.92□□□□□ -1.46
SSBP3-213ENST00000530618 MOB2Q70IA6 237 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 AGBL3Q8NEM8 1001 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 CCDC85AQ96PX6 553 aaPredicted RBP5.92□□□□□ -1.46
SSBP3-213ENST00000530618 CSRNP1Q96S65 589 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 MPHOSPH8Q99549 860 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 PLA2G12BQ9BX93 195 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 GREM2Q9H772 168 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 ZNF408Q9H9D4 720 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 MINPP1Q9UNW1 487 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 SCAF8Q9UPN6 1271 aaKnown RBP5.92□□□□□ -1.46
SSBP3-213ENST00000530618 UTYO14607 1347 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 XDHP47989 1333 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 AOX1Q06278 1338 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 PITPNM2Q9BZ72 1349 aa5.92□□□□□ -1.46
SSBP3-213ENST00000530618 SRGAP3O43295 1099 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 CSF1RP07333 972 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 SCARF1Q14162 830 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 NBPF9Q3BBW0 867 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 ANGEL2Q5VTE6 544 aaKnown RBP5.91□□□□□ -1.46
SSBP3-213ENST00000530618 ANKRD18AQ8IVF6 992 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 CCDC136Q96JN2 1154 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 CRBNQ96SW2 442 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 EYA3Q99504 573 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 MEIS3Q99687 375 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 MYOZ2Q9NPC6 264 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 RNF186Q9NXI6 227 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 SAGE1Q9NXZ1 904 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 GGA1Q9UJY5 639 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 FBXO3Q9UK99 471 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 LAMA3Q16787 3333 aa5.91□□□□□ -1.46
SSBP3-213ENST00000530618 SNAP23O00161 211 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 WNT10BO00744 389 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 ZBTB7BO15156 539 aaPredicted RBP5.9□□□□□ -1.46
SSBP3-213ENST00000530618 RAB11FIP3O75154 756 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 RLBP1P12271 317 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 G3BP1Q13283 466 aaKnown RBP eCLIP5.9□□□□□ -1.46
SSBP3-213ENST00000530618 RBM26Q5T8P6 1007 aaKnown RBP5.9□□□□□ -1.46
SSBP3-213ENST00000530618 PODNQ7Z5L7 613 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 CERS5Q8N5B7 392 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 GCC1Q96CN9 775 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 GPATCH3Q96I76 525 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 ZC3H12CQ9C0D7 883 aaKnown RBP5.9□□□□□ -1.46
SSBP3-213ENST00000530618 USP44Q9H0E7 712 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 BICC1Q9H694 974 aaKnown RBP5.9□□□□□ -1.46
SSBP3-213ENST00000530618 CNNM1Q9NRU3 951 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 ZBTB40Q9NUA8 1239 aa5.9□□□□□ -1.46
SSBP3-213ENST00000530618 BSDC1Q9NW68 430 aaPredicted RBP5.9□□□□□ -1.46
SSBP3-213ENST00000530618 LRRFIP2Q9Y608 721 aaKnown RBP5.9□□□□□ -1.46
SSBP3-213ENST00000530618 USP17L3A6NCW0 530 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 USP17L4A6NCW7 530 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 CCDC85CA6NKD9 419 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 NBPF7P0C2Y1 421 aaPredicted RBP5.89□□□□□ -1.47
SSBP3-213ENST00000530618 USP17L8P0C7I0 530 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 ITGA6P23229 1130 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 ATP2B4P23634 1241 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 KCNJ4P48050 445 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 ZNF157P51786 506 aaPredicted RBP5.89□□□□□ -1.47
SSBP3-213ENST00000530618 FOXO4P98177 505 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 ATP8B2P98198 1209 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 CAP1Q01518 475 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 MTX1Q13505 466 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 DGKZQ13574 1117 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 EPHA10Q5JZY3 1008 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 C20orf194Q5TEA3 1177 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 PRAMEF18Q5VWM3 479 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 LMBR1LQ6UX01 489 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 USP17L1Q7RTZ2 530 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 ANKRD44Q8N8A2 993 aa5.89□□□□□ -1.47
SSBP3-213ENST00000530618 DCPSQ96C86 337 aaKnown RBP5.89□□□□□ -1.47
SSBP3-213ENST00000530618 SUCLG2Q96I99 432 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms