RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 CCDC57Q2TAC2 916 aa26.31■■□□□ 1.8
TSPAN4-219ENST00000530404 C15orf52Q6ZUT6 534 aaKnown RBP26.31■■□□□ 1.8
TSPAN4-219ENST00000530404 REM2Q8IYK8 340 aaPredicted RBP26.31■■□□□ 1.8
TSPAN4-219ENST00000530404 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.31■■□□□ 1.8
TSPAN4-219ENST00000530404 OTOFQ9HC10 1997 aa26.31■■□□□ 1.8
TSPAN4-219ENST00000530404 TBC1D8O95759 1140 aa26.3■■□□□ 1.8
TSPAN4-219ENST00000530404 MMP14P50281 582 aa26.3■■□□□ 1.8
TSPAN4-219ENST00000530404 DLGAP5Q15398 846 aa26.3■■□□□ 1.8
TSPAN4-219ENST00000530404 LDHAL6AQ6ZMR3 332 aa26.3■■□□□ 1.8
TSPAN4-219ENST00000530404 ZNF804AQ7Z570 1209 aa26.3■■□□□ 1.8
TSPAN4-219ENST00000530404 CNNM1Q9NRU3 951 aa26.3■■□□□ 1.8
TSPAN4-219ENST00000530404 C9orf78Q9NZ63 289 aaPredicted RBP26.3■■□□□ 1.8
TSPAN4-219ENST00000530404 IL1R1P14778 569 aa26.29■■□□□ 1.8
TSPAN4-219ENST00000530404 ZEB1P37275 1124 aaPredicted RBP26.29■■□□□ 1.8
TSPAN4-219ENST00000530404 MYH13Q9UKX3 1938 aa26.29■■□□□ 1.8
TSPAN4-219ENST00000530404 ARMC9Q7Z3E5 817 aa26.28■■□□□ 1.8
TSPAN4-219ENST00000530404 SUCLG2Q96I99 432 aa26.28■■□□□ 1.8
TSPAN4-219ENST00000530404 ANGEL1Q9UNK9 670 aaKnown RBP26.28■■□□□ 1.8
TSPAN4-219ENST00000530404 AOX1Q06278 1338 aa26.28■■□□□ 1.8
TSPAN4-219ENST00000530404 SSC5DA1L4H1 1573 aa26.28■■□□□ 1.8
TSPAN4-219ENST00000530404 CLRN2A0PK11 232 aa26.27■■□□□ 1.8
TSPAN4-219ENST00000530404 CFAP100Q494V2 611 aa26.27■■□□□ 1.8
TSPAN4-219ENST00000530404 CTU1Q7Z7A3 348 aaKnown RBP26.27■■□□□ 1.8
TSPAN4-219ENST00000530404 COL1A1P02452 1464 aaPredicted RBP26.27■■□□□ 1.8
TSPAN4-219ENST00000530404 ALDH1L1O75891 902 aa26.26■■□□□ 1.79
TSPAN4-219ENST00000530404 PUS3Q9BZE2 481 aaKnown RBP26.26■■□□□ 1.79
TSPAN4-219ENST00000530404 SRCIN1Q9C0H9 1055 aa26.26■■□□□ 1.79
TSPAN4-219ENST00000530404 DEFB129Q9H1M3 183 aa26.26■■□□□ 1.79
TSPAN4-219ENST00000530404 SOX10P56693 466 aa26.25■■□□□ 1.79
TSPAN4-219ENST00000530404 TM4SF4P48230 202 aa26.24■■□□□ 1.79
TSPAN4-219ENST00000530404 MTMR14Q8NCE2 650 aa26.24■■□□□ 1.79
TSPAN4-219ENST00000530404 ZNF296Q8WUU4 475 aaPredicted RBP26.24■■□□□ 1.79
TSPAN4-219ENST00000530404 KAZALD1Q96I82 304 aa26.24■■□□□ 1.79
TSPAN4-219ENST00000530404 PRMT6Q96LA8 375 aaPredicted RBP26.24■■□□□ 1.79
TSPAN4-219ENST00000530404 VEZTQ9HBM0 779 aa26.24■■□□□ 1.79
TSPAN4-219ENST00000530404 NBPF7P0C2Y1 421 aaPredicted RBP26.23■■□□□ 1.79
TSPAN4-219ENST00000530404 RBM5P52756 815 aaKnown RBP eCLIP26.23■■□□□ 1.79
TSPAN4-219ENST00000530404 LDLRAD1Q5T700 205 aa26.23■■□□□ 1.79
TSPAN4-219ENST00000530404 PDE4DIPQ5VU43 2346 aa26.22■■□□□ 1.79
TSPAN4-219ENST00000530404 SPDYE2BA6NHP3 402 aa26.22■■□□□ 1.79
TSPAN4-219ENST00000530404 SPDYE6P0CI01 402 aa26.22■■□□□ 1.79
TSPAN4-219ENST00000530404 GYG1P46976 350 aa26.22■■□□□ 1.79
TSPAN4-219ENST00000530404 FKBP1AP62942 108 aaKnown RBP26.22■■□□□ 1.79
TSPAN4-219ENST00000530404 SPRYD7Q5W111 196 aa26.21■■□□□ 1.79
TSPAN4-219ENST00000530404 CLMNQ96JQ2 1002 aa26.21■■□□□ 1.79
TSPAN4-219ENST00000530404 R3HDMLQ9H3Y0 253 aa26.21■■□□□ 1.79
TSPAN4-219ENST00000530404 ZNF521Q96K83 1311 aa26.2■■□□□ 1.79
TSPAN4-219ENST00000530404 MYO1BO43795 1136 aa26.2■■□□□ 1.78
TSPAN4-219ENST00000530404 SREBF2Q12772 1141 aa26.2■■□□□ 1.78
TSPAN4-219ENST00000530404 GPR25O00155 361 aa26.19■■□□□ 1.78
TSPAN4-219ENST00000530404 UBE4AQ14139 1066 aa26.19■■□□□ 1.78
TSPAN4-219ENST00000530404 NBPF12Q5TAG4 269 aaPredicted RBP26.19■■□□□ 1.78
TSPAN4-219ENST00000530404 MRPL50Q8N5N7 158 aaKnown RBP26.19■■□□□ 1.78
TSPAN4-219ENST00000530404 BICC1Q9H694 974 aaKnown RBP26.19■■□□□ 1.78
TSPAN4-219ENST00000530404 FAM205AQ6ZU69 1335 aa26.18■■□□□ 1.78
TSPAN4-219ENST00000530404 HIBADHP31937 336 aaKnown RBP26.18■■□□□ 1.78
TSPAN4-219ENST00000530404 MFSD14BQ5SR56 506 aa26.18■■□□□ 1.78
TSPAN4-219ENST00000530404 TDRD7Q8NHU6 1098 aaKnown RBP26.18■■□□□ 1.78
TSPAN4-219ENST00000530404 SLC10A4Q96EP9 437 aa26.18■■□□□ 1.78
TSPAN4-219ENST00000530404 FAM84BQ96KN1 310 aaPredicted RBP26.17■■□□□ 1.78
TSPAN4-219ENST00000530404 TTF2Q9UNY4 1162 aaKnown RBP26.17■■□□□ 1.78
TSPAN4-219ENST00000530404 IQSEC3Q9UPP2 1182 aaPredicted RBP26.17■■□□□ 1.78
TSPAN4-219ENST00000530404 HPS5Q9UPZ3 1129 aa26.17■■□□□ 1.78
TSPAN4-219ENST00000530404 RIPOR2Q9Y4F9 1068 aa26.17■■□□□ 1.78
TSPAN4-219ENST00000530404 PPP2R3BQ9Y5P8 575 aa26.17■■□□□ 1.78
TSPAN4-219ENST00000530404 CENPFP49454 3210 aa26.16■■□□□ 1.78
TSPAN4-219ENST00000530404 UTYO14607 1347 aa26.16■■□□□ 1.78
TSPAN4-219ENST00000530404 HTTP42858 3142 aa26.16■■□□□ 1.78
TSPAN4-219ENST00000530404 PPP1R12BO60237 982 aaPredicted RBP26.16■■□□□ 1.78
TSPAN4-219ENST00000530404 MAP3K11Q16584 847 aa26.16■■□□□ 1.78
TSPAN4-219ENST00000530404 LRRC24Q50LG9 513 aa26.16■■□□□ 1.78
TSPAN4-219ENST00000530404 WNK4Q96J92 1243 aa26.16■■□□□ 1.78
TSPAN4-219ENST00000530404 RASA3Q14644 834 aa26.15■■□□□ 1.78
TSPAN4-219ENST00000530404 ANKRD44Q8N8A2 993 aa26.15■■□□□ 1.78
TSPAN4-219ENST00000530404 TDRD3Q9H7E2 651 aaKnown RBP26.15■■□□□ 1.78
TSPAN4-219ENST00000530404 AK9Q5TCS8 1911 aa26.14■■□□□ 1.78
TSPAN4-219ENST00000530404 GRIK5Q16478 980 aa26.14■■□□□ 1.78
TSPAN4-219ENST00000530404 SUPT20HL1Q3ZLR7 823 aa26.14■■□□□ 1.78
TSPAN4-219ENST00000530404 ZNF70Q9UC06 446 aaPredicted RBP26.14■■□□□ 1.78
TSPAN4-219ENST00000530404 MROH5Q6ZUA9 1318 aa26.14■■□□□ 1.77
TSPAN4-219ENST00000530404 USP2O75604 605 aaPredicted RBP26.13■■□□□ 1.77
TSPAN4-219ENST00000530404 RABL6Q3YEC7 729 aaPredicted RBP26.13■■□□□ 1.77
TSPAN4-219ENST00000530404 KLHDC4Q8TBB5 520 aa26.13■■□□□ 1.77
TSPAN4-219ENST00000530404 MANSC4A6NHS7 340 aaPredicted RBP26.12■■□□□ 1.77
TSPAN4-219ENST00000530404 FKTNO75072 461 aa26.12■■□□□ 1.77
TSPAN4-219ENST00000530404 GJA5P36382 358 aa26.12■■□□□ 1.77
TSPAN4-219ENST00000530404 CHAF1AQ13111 956 aaPredicted RBP26.12■■□□□ 1.77
TSPAN4-219ENST00000530404 SPDYE2Q495Y8 402 aa26.12■■□□□ 1.77
TSPAN4-219ENST00000530404 METTL24Q5JXM2 366 aa26.12■■□□□ 1.77
TSPAN4-219ENST00000530404 CDAN1Q8IWY9 1227 aa26.12■■□□□ 1.77
TSPAN4-219ENST00000530404 IFNL1Q8IU54 200 aa26.11■■□□□ 1.77
TSPAN4-219ENST00000530404 SSH1Q8WYL5 1049 aa26.11■■□□□ 1.77
TSPAN4-219ENST00000530404 SERPINA10Q9UK55 444 aa26.11■■□□□ 1.77
TSPAN4-219ENST00000530404 TCP10L2B9ZVM9 353 aa26.1■■□□□ 1.77
TSPAN4-219ENST00000530404 IGF2BP3O00425 579 aaKnown RBP eCLIP26.1■■□□□ 1.77
TSPAN4-219ENST00000530404 ZBTB48P10074 688 aaPredicted RBP26.1■■□□□ 1.77
TSPAN4-219ENST00000530404 CRKP46108 304 aa26.1■■□□□ 1.77
TSPAN4-219ENST00000530404 IREB2P48200 963 aaKnown RBP26.1■■□□□ 1.77
TSPAN4-219ENST00000530404 PKN2Q16513 984 aaKnown RBP26.1■■□□□ 1.77
TSPAN4-219ENST00000530404 NOM1Q5C9Z4 860 aaKnown RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms