RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 SLC5A1P13866 664 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 ECE1P42892 770 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 RFX5P48382 616 aaPredicted RBP17.79■□□□□ 0.44
CAPN1-216ENST00000528739 PUM3Q15397 648 aaKnown RBP17.79■□□□□ 0.44
CAPN1-216ENST00000528739 DLGAP5Q15398 846 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 C2orf69Q8N8R5 385 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 CEP126Q9P2H0 1117 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 PA2G4Q9UQ80 394 aaKnown RBP17.79■□□□□ 0.44
CAPN1-216ENST00000528739 TLL2Q9Y6L7 1015 aa17.79■□□□□ 0.44
CAPN1-216ENST00000528739 WDR33Q9C0J8 1336 aaKnown RBP17.78■□□□□ 0.44
CAPN1-216ENST00000528739 WNT10BO00744 389 aa17.78■□□□□ 0.44
CAPN1-216ENST00000528739 CYP4F22Q6NT55 531 aa17.78■□□□□ 0.44
CAPN1-216ENST00000528739 ITPRIPQ8IWB1 547 aa17.78■□□□□ 0.44
CAPN1-216ENST00000528739 DZIP1LQ8IYY4 767 aaKnown RBP17.78■□□□□ 0.44
CAPN1-216ENST00000528739 MMP14P50281 582 aa17.77■□□□□ 0.44
CAPN1-216ENST00000528739 BCAMP50895 628 aa17.77■□□□□ 0.44
CAPN1-216ENST00000528739 MFSD14BQ5SR56 506 aa17.77■□□□□ 0.44
CAPN1-216ENST00000528739 CERS5Q8N5B7 392 aa17.77■□□□□ 0.44
CAPN1-216ENST00000528739 TDRD7Q8NHU6 1098 aaKnown RBP17.77■□□□□ 0.44
CAPN1-216ENST00000528739 AIDAQ96BJ3 306 aa17.77■□□□□ 0.44
CAPN1-216ENST00000528739 CDCA5Q96FF9 252 aa17.77■□□□□ 0.44
CAPN1-216ENST00000528739 CAPNS2Q96L46 248 aa17.77■□□□□ 0.44
CAPN1-216ENST00000528739 GBA2Q9HCG7 927 aaPredicted RBP17.77■□□□□ 0.44
CAPN1-216ENST00000528739 ZNF609O15014 1411 aa17.77■□□□□ 0.44
CAPN1-216ENST00000528739 MYO1BO43795 1136 aa17.76■□□□□ 0.43
CAPN1-216ENST00000528739 IL15P40933 162 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-216ENST00000528739 HUNKP57058 714 aa17.76■□□□□ 0.43
CAPN1-216ENST00000528739 CFAP100Q494V2 611 aa17.76■□□□□ 0.43
CAPN1-216ENST00000528739 FBXO33Q7Z6M2 555 aa17.76■□□□□ 0.43
CAPN1-216ENST00000528739 SAPCD2Q86UD0 394 aa17.76■□□□□ 0.43
CAPN1-216ENST00000528739 VGLL2Q8N8G2 317 aa17.76■□□□□ 0.43
CAPN1-216ENST00000528739 LPIN2Q92539 896 aa17.76■□□□□ 0.43
CAPN1-216ENST00000528739 CIAO1O76071 339 aa17.75■□□□□ 0.43
CAPN1-216ENST00000528739 FKBP1AP62942 108 aaKnown RBP17.75■□□□□ 0.43
CAPN1-216ENST00000528739 TTLL12Q14166 644 aaPredicted RBP17.75■□□□□ 0.43
CAPN1-216ENST00000528739 ATP2B3Q16720 1220 aa17.75■□□□□ 0.43
CAPN1-216ENST00000528739 PRAMEF18Q5VWM3 479 aa17.75■□□□□ 0.43
CAPN1-216ENST00000528739 ATG9AQ7Z3C6 839 aa17.75■□□□□ 0.43
CAPN1-216ENST00000528739 FBXO3Q9UK99 471 aa17.75■□□□□ 0.43
CAPN1-216ENST00000528739 TTF2Q9UNY4 1162 aaKnown RBP17.75■□□□□ 0.43
CAPN1-216ENST00000528739 PITPNM2Q9BZ72 1349 aa17.74■□□□□ 0.43
CAPN1-216ENST00000528739 NF2P35240 595 aa17.74■□□□□ 0.43
CAPN1-216ENST00000528739 FAM205AQ6ZU69 1335 aa17.73■□□□□ 0.43
CAPN1-216ENST00000528739 FGFR2P21802 821 aa17.73■□□□□ 0.43
CAPN1-216ENST00000528739 G3BP1Q13283 466 aaKnown RBP eCLIP17.73■□□□□ 0.43
CAPN1-216ENST00000528739 APOBEC3FQ8IUX4 373 aaKnown RBP17.73■□□□□ 0.43
CAPN1-216ENST00000528739 BEGAINQ9BUH8 593 aa17.73■□□□□ 0.43
CAPN1-216ENST00000528739 VEZTQ9HBM0 779 aa17.73■□□□□ 0.43
CAPN1-216ENST00000528739 COPRSQ9NQ92 184 aa17.73■□□□□ 0.43
CAPN1-216ENST00000528739 GNL3LQ9NVN8 582 aaKnown RBP17.73■□□□□ 0.43
CAPN1-216ENST00000528739 CLRN2A0PK11 232 aa17.72■□□□□ 0.43
CAPN1-216ENST00000528739 AOC2O75106 756 aa17.72■□□□□ 0.43
CAPN1-216ENST00000528739 MAP2K1Q02750 393 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-216ENST00000528739 TBC1D22AQ8WUA7 517 aa17.72■□□□□ 0.43
CAPN1-216ENST00000528739 C1orf115Q9H7X2 142 aa17.72■□□□□ 0.43
CAPN1-216ENST00000528739 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-216ENST00000528739 PCDHAC2Q9Y5I4 1007 aa17.72■□□□□ 0.43
CAPN1-216ENST00000528739 ZNF157P51786 506 aaPredicted RBP17.71■□□□□ 0.43
CAPN1-216ENST00000528739 OS9Q13438 667 aaPredicted RBP17.71■□□□□ 0.43
CAPN1-216ENST00000528739 PRKG1Q13976 671 aa17.71■□□□□ 0.43
CAPN1-216ENST00000528739 NEUROD6Q96NK8 337 aa17.71■□□□□ 0.43
CAPN1-216ENST00000528739 PSME4Q14997 1843 aa17.7■□□□□ 0.42
CAPN1-216ENST00000528739 PNMA6EA0A0J9YXQ4 647 aa17.7■□□□□ 0.42
CAPN1-216ENST00000528739 MS4A1P11836 297 aa17.7■□□□□ 0.42
CAPN1-216ENST00000528739 RLBP1P12271 317 aa17.7■□□□□ 0.42
CAPN1-216ENST00000528739 TFCP2Q12800 502 aa17.7■□□□□ 0.42
CAPN1-216ENST00000528739 RGMBQ6NW40 437 aa17.7■□□□□ 0.42
CAPN1-216ENST00000528739 PANK1Q8TE04 598 aa17.7■□□□□ 0.42
CAPN1-216ENST00000528739 PRMT6Q96LA8 375 aaPredicted RBP17.7■□□□□ 0.42
CAPN1-216ENST00000528739 AKAP2Q9Y2D5 859 aa17.7■□□□□ 0.42
CAPN1-216ENST00000528739 TRPM7Q96QT4 1865 aa17.69■□□□□ 0.42
CAPN1-216ENST00000528739 SPDYE2BA6NHP3 402 aa17.69■□□□□ 0.42
CAPN1-216ENST00000528739 SPDYE6P0CI01 402 aa17.69■□□□□ 0.42
CAPN1-216ENST00000528739 TIMM10P62072 90 aa17.69■□□□□ 0.42
CAPN1-216ENST00000528739 MTX1Q13505 466 aa17.69■□□□□ 0.42
CAPN1-216ENST00000528739 GORABQ5T7V8 394 aa17.69■□□□□ 0.42
CAPN1-216ENST00000528739 MTMR14Q8NCE2 650 aa17.69■□□□□ 0.42
CAPN1-216ENST00000528739 HHIPL1Q96JK4 782 aa17.69■□□□□ 0.42
CAPN1-216ENST00000528739 RCAN3Q9UKA8 241 aa17.69■□□□□ 0.42
CAPN1-216ENST00000528739 A0A1B0GUL6 1792 aa17.68■□□□□ 0.42
CAPN1-216ENST00000528739 FOXN1O15353 648 aa17.68■□□□□ 0.42
CAPN1-216ENST00000528739 CRKP46108 304 aa17.68■□□□□ 0.42
CAPN1-216ENST00000528739 WDR66Q8TBY9 1149 aa17.68■□□□□ 0.42
CAPN1-216ENST00000528739 DEFB129Q9H1M3 183 aa17.68■□□□□ 0.42
CAPN1-216ENST00000528739 SERPINA10Q9UK55 444 aa17.68■□□□□ 0.42
CAPN1-216ENST00000528739 UBE2Q2LH0YL09 131 aa17.67■□□□□ 0.42
CAPN1-216ENST00000528739 ZBTB7BO15156 539 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-216ENST00000528739 ADORA1P30542 326 aa17.67■□□□□ 0.42
CAPN1-216ENST00000528739 MAP2K2P36507 400 aa17.67■□□□□ 0.42
CAPN1-216ENST00000528739 ATP8B2P98198 1209 aa17.67■□□□□ 0.42
CAPN1-216ENST00000528739 GRIK5Q16478 980 aa17.67■□□□□ 0.42
CAPN1-216ENST00000528739 MOB2Q70IA6 237 aa17.67■□□□□ 0.42
CAPN1-216ENST00000528739 TEKT1Q969V4 418 aa17.67■□□□□ 0.42
CAPN1-216ENST00000528739 CCDC102AQ96A19 550 aa17.67■□□□□ 0.42
CAPN1-216ENST00000528739 ZBED3Q96IU2 234 aaPredicted RBP17.67■□□□□ 0.42
CAPN1-216ENST00000528739 TDRD3Q9H7E2 651 aaKnown RBP17.67■□□□□ 0.42
CAPN1-216ENST00000528739 WBP1LQ9NX94 342 aa17.67■□□□□ 0.42
CAPN1-216ENST00000528739 POLR2AP24928 1970 aaKnown RBP17.66■□□□□ 0.42
CAPN1-216ENST00000528739 A0A1B0GUL7 405 aa17.66■□□□□ 0.42
CAPN1-216ENST00000528739 SURF6O75683 361 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms