RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ZNF646O15015 1829 aaPredicted RBP28.25■■■□□ 2.11
TRAPPC4-208ENST00000527680 IRS2Q9Y4H2 1338 aa28.25■■■□□ 2.11
TRAPPC4-208ENST00000527680 MYO1BO43795 1136 aa28.24■■■□□ 2.11
TRAPPC4-208ENST00000527680 RBM5P52756 815 aaKnown RBP eCLIP28.24■■■□□ 2.11
TRAPPC4-208ENST00000527680 MKRN3Q13064 507 aaKnown RBP28.24■■■□□ 2.11
TRAPPC4-208ENST00000527680 SUCLG2Q96I99 432 aa28.24■■■□□ 2.11
TRAPPC4-208ENST00000527680 ZBED3Q96IU2 234 aaPredicted RBP28.24■■■□□ 2.11
TRAPPC4-208ENST00000527680 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.24■■■□□ 2.11
TRAPPC4-208ENST00000527680 NBPF7P0C2Y1 421 aaPredicted RBP28.23■■■□□ 2.11
TRAPPC4-208ENST00000527680 DEFB129Q9H1M3 183 aa28.23■■■□□ 2.11
TRAPPC4-208ENST00000527680 PTPN12Q05209 780 aaKnown RBP28.22■■■□□ 2.11
TRAPPC4-208ENST00000527680 CFAP100Q494V2 611 aa28.22■■■□□ 2.11
TRAPPC4-208ENST00000527680 ANGEL1Q9UNK9 670 aaKnown RBP28.22■■■□□ 2.11
TRAPPC4-208ENST00000527680 FKBP1AP62942 108 aaKnown RBP28.21■■■□□ 2.11
TRAPPC4-208ENST00000527680 UBE4AQ14139 1066 aa28.21■■■□□ 2.11
TRAPPC4-208ENST00000527680 MRPL50Q8N5N7 158 aaKnown RBP28.21■■■□□ 2.11
TRAPPC4-208ENST00000527680 PUS3Q9BZE2 481 aaKnown RBP28.21■■■□□ 2.11
TRAPPC4-208ENST00000527680 ZNF521Q96K83 1311 aa28.2■■■□□ 2.11
TRAPPC4-208ENST00000527680 HIBADHP31937 336 aaKnown RBP28.2■■■□□ 2.1
TRAPPC4-208ENST00000527680 MTMR14Q8NCE2 650 aa28.2■■■□□ 2.1
TRAPPC4-208ENST00000527680 PCDHAC2Q9Y5I4 1007 aa28.2■■■□□ 2.1
TRAPPC4-208ENST00000527680 CLRN2A0PK11 232 aa28.19■■■□□ 2.1
TRAPPC4-208ENST00000527680 GYG1P46976 350 aa28.19■■■□□ 2.1
TRAPPC4-208ENST00000527680 MLLT1Q03111 559 aaPredicted RBP28.19■■■□□ 2.1
TRAPPC4-208ENST00000527680 KAZALD1Q96I82 304 aa28.19■■■□□ 2.1
TRAPPC4-208ENST00000527680 PRMT6Q96LA8 375 aaPredicted RBP28.19■■■□□ 2.1
TRAPPC4-208ENST00000527680 VEZTQ9HBM0 779 aa28.19■■■□□ 2.1
TRAPPC4-208ENST00000527680 E9PSI1 815 aa28.18■■■□□ 2.1
TRAPPC4-208ENST00000527680 TBC1D8O95759 1140 aa28.18■■■□□ 2.1
TRAPPC4-208ENST00000527680 BICC1Q9H694 974 aaKnown RBP28.18■■■□□ 2.1
TRAPPC4-208ENST00000527680 PPP1R12BO60237 982 aaPredicted RBP28.17■■■□□ 2.1
TRAPPC4-208ENST00000527680 VPS37DQ86XT2 251 aa28.17■■■□□ 2.1
TRAPPC4-208ENST00000527680 SLC10A4Q96EP9 437 aa28.17■■■□□ 2.1
TRAPPC4-208ENST00000527680 FZD1Q9UP38 647 aa28.17■■■□□ 2.1
TRAPPC4-208ENST00000527680 A0A1B0GUL6 1792 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 SPDYE2BA6NHP3 402 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 SPDYE6P0CI01 402 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 TM4SF4P48230 202 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 SUPT20HL1Q3ZLR7 823 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 MFSD14BQ5SR56 506 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 TDRD7Q8NHU6 1098 aaKnown RBP28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 FAM84BQ96KN1 310 aaPredicted RBP28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 RIPOR2Q9Y4F9 1068 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 UTYO14607 1347 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 PTPRCP08575 1304 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 MROH5Q6ZUA9 1318 aa28.16■■■□□ 2.1
TRAPPC4-208ENST00000527680 SREBF2Q12772 1141 aa28.15■■■□□ 2.1
TRAPPC4-208ENST00000527680 LDLRAD1Q5T700 205 aa28.15■■■□□ 2.1
TRAPPC4-208ENST00000527680 CTU1Q7Z7A3 348 aaKnown RBP28.15■■■□□ 2.1
TRAPPC4-208ENST00000527680 SSH1Q8WYL5 1049 aa28.15■■■□□ 2.1
TRAPPC4-208ENST00000527680 PPP2R3BQ9Y5P8 575 aa28.15■■■□□ 2.1
TRAPPC4-208ENST00000527680 FAM205AQ6ZU69 1335 aa28.15■■■□□ 2.1
TRAPPC4-208ENST00000527680 RGS19P49795 217 aa28.14■■■□□ 2.1
TRAPPC4-208ENST00000527680 METTL24Q5JXM2 366 aa28.14■■■□□ 2.1
TRAPPC4-208ENST00000527680 TTF2Q9UNY4 1162 aaKnown RBP28.14■■■□□ 2.1
TRAPPC4-208ENST00000527680 FRAT2O75474 233 aaPredicted RBP28.13■■■□□ 2.09
TRAPPC4-208ENST00000527680 SLFN5Q08AF3 891 aa28.12■■■□□ 2.09
TRAPPC4-208ENST00000527680 RABL6Q3YEC7 729 aaPredicted RBP28.12■■■□□ 2.09
TRAPPC4-208ENST00000527680 LRRC24Q50LG9 513 aa28.12■■■□□ 2.09
TRAPPC4-208ENST00000527680 SPRYD7Q5W111 196 aa28.12■■■□□ 2.09
TRAPPC4-208ENST00000527680 COL1A1P02452 1464 aaPredicted RBP28.12■■■□□ 2.09
TRAPPC4-208ENST00000527680 CAVIN4Q5BKX8 364 aa28.11■■■□□ 2.09
TRAPPC4-208ENST00000527680 IQSEC3Q9UPP2 1182 aaPredicted RBP28.11■■■□□ 2.09
TRAPPC4-208ENST00000527680 CHAF1AQ13111 956 aaPredicted RBP28.1■■■□□ 2.09
TRAPPC4-208ENST00000527680 RASA3Q14644 834 aa28.1■■■□□ 2.09
TRAPPC4-208ENST00000527680 NBPF12Q5TAG4 269 aaPredicted RBP28.1■■■□□ 2.09
TRAPPC4-208ENST00000527680 ANKRD44Q8N8A2 993 aa28.1■■■□□ 2.09
TRAPPC4-208ENST00000527680 ZNF296Q8WUU4 475 aaPredicted RBP28.1■■■□□ 2.09
TRAPPC4-208ENST00000527680 USP44Q9H0E7 712 aa28.09■■■□□ 2.09
TRAPPC4-208ENST00000527680 TDRD3Q9H7E2 651 aaKnown RBP28.09■■■□□ 2.09
TRAPPC4-208ENST00000527680 SERPINA10Q9UK55 444 aa28.09■■■□□ 2.09
TRAPPC4-208ENST00000527680 AOX1Q06278 1338 aa28.09■■■□□ 2.09
TRAPPC4-208ENST00000527680 ECM29Q5VYK3 1845 aa28.08■■■□□ 2.09
TRAPPC4-208ENST00000527680 IREB2P48200 963 aaKnown RBP28.08■■■□□ 2.09
TRAPPC4-208ENST00000527680 TNFAIP1Q13829 316 aa28.08■■■□□ 2.09
TRAPPC4-208ENST00000527680 MAP3K11Q16584 847 aa28.08■■■□□ 2.09
TRAPPC4-208ENST00000527680 FBXO33Q7Z6M2 555 aa28.08■■■□□ 2.09
TRAPPC4-208ENST00000527680 KLHDC4Q8TBB5 520 aa28.08■■■□□ 2.09
TRAPPC4-208ENST00000527680 CDCA7LQ96GN5 454 aa28.08■■■□□ 2.09
TRAPPC4-208ENST00000527680 ZNF70Q9UC06 446 aaPredicted RBP28.08■■■□□ 2.09
TRAPPC4-208ENST00000527680 GPR25O00155 361 aa28.07■■■□□ 2.08
TRAPPC4-208ENST00000527680 PDE8BO95263 885 aa28.07■■■□□ 2.08
TRAPPC4-208ENST00000527680 INHBEP58166 350 aa28.07■■■□□ 2.08
TRAPPC4-208ENST00000527680 CLMNQ96JQ2 1002 aa28.07■■■□□ 2.08
TRAPPC4-208ENST00000527680 SMC4Q9NTJ3 1288 aa28.07■■■□□ 2.08
TRAPPC4-208ENST00000527680 MANSC4A6NHS7 340 aaPredicted RBP28.06■■■□□ 2.08
TRAPPC4-208ENST00000527680 DZIP1LQ8IYY4 767 aaKnown RBP28.06■■■□□ 2.08
TRAPPC4-208ENST00000527680 USP2O75604 605 aaPredicted RBP28.05■■■□□ 2.08
TRAPPC4-208ENST00000527680 ALDH1A1P00352 501 aa28.05■■■□□ 2.08
TRAPPC4-208ENST00000527680 CRKP46108 304 aa28.05■■■□□ 2.08
TRAPPC4-208ENST00000527680 PKN2Q16513 984 aaKnown RBP28.05■■■□□ 2.08
TRAPPC4-208ENST00000527680 ALDH1L2Q3SY69 923 aa28.05■■■□□ 2.08
TRAPPC4-208ENST00000527680 SPDYE2Q495Y8 402 aa28.05■■■□□ 2.08
TRAPPC4-208ENST00000527680 UNCXA6NJT0 531 aa28.04■■■□□ 2.08
TRAPPC4-208ENST00000527680 TCP10L2B9ZVM9 353 aa28.04■■■□□ 2.08
TRAPPC4-208ENST00000527680 SOX10P56693 466 aa28.04■■■□□ 2.08
TRAPPC4-208ENST00000527680 TBC1D22AQ8WUA7 517 aa28.04■■■□□ 2.08
TRAPPC4-208ENST00000527680 WNK4Q96J92 1243 aa28.04■■■□□ 2.08
TRAPPC4-208ENST00000527680 FKTNO75072 461 aa28.03■■■□□ 2.08
TRAPPC4-208ENST00000527680 ZBTB48P10074 688 aaPredicted RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms