RNA–Protein interactions for RNA: ENST00000527052.5

NOD2-204, Transcript of nucleotide binding oligomerization domain containing 2, human

TSL 1 (best)

Gene NOD2, Length 338 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NOD2-204	ENST00000527052	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.57	■□□□□ 0.56
NOD2-204	ENST00000527052	PRAMEF18	Q5VWM3	479 aa		18.57	■□□□□ 0.56
NOD2-204	ENST00000527052	CSRNP1	Q96S65	589 aa		18.57	■□□□□ 0.56
NOD2-204	ENST00000527052	MROH5	Q6ZUA9	1318 aa		18.56	■□□□□ 0.56
NOD2-204	ENST00000527052	UBE2Q2L	H0YL09	131 aa		18.56	■□□□□ 0.56
NOD2-204	ENST00000527052	MYO1B	O43795	1136 aa		18.56	■□□□□ 0.56
NOD2-204	ENST00000527052	TRPA1	O75762	1119 aa		18.56	■□□□□ 0.56
NOD2-204	ENST00000527052	RABL6	Q3YEC7	729 aa	Predicted RBP	18.56	■□□□□ 0.56
NOD2-204	ENST00000527052	ARMC9	Q7Z3E5	817 aa		18.56	■□□□□ 0.56
NOD2-204	ENST00000527052	KAZALD1	Q96I82	304 aa		18.56	■□□□□ 0.56
NOD2-204	ENST00000527052	MCOLN1	Q9GZU1	580 aa		18.56	■□□□□ 0.56
NOD2-204	ENST00000527052	PPP2R3B	Q9Y5P8	575 aa		18.56	■□□□□ 0.56
NOD2-204	ENST00000527052	CASP8AP2	Q9UKL3	1982 aa		18.55	■□□□□ 0.56
NOD2-204	ENST00000527052	FAM205A	Q6ZU69	1335 aa		18.55	■□□□□ 0.56
NOD2-204	ENST00000527052	SLFN5	Q08AF3	891 aa		18.55	■□□□□ 0.56
NOD2-204	ENST00000527052	MOB2	Q70IA6	237 aa		18.55	■□□□□ 0.56
NOD2-204	ENST00000527052	BICC1	Q9H694	974 aa	Known RBP	18.55	■□□□□ 0.56
NOD2-204	ENST00000527052	AKAP11	Q9UKA4	1901 aa		18.55	■□□□□ 0.56
NOD2-204	ENST00000527052	SPDYE2B	A6NHP3	402 aa		18.54	■□□□□ 0.56
NOD2-204	ENST00000527052	SPDYE6	P0CI01	402 aa		18.54	■□□□□ 0.56
NOD2-204	ENST00000527052	HIBADH	P31937	336 aa	Known RBP	18.54	■□□□□ 0.56
NOD2-204	ENST00000527052	DGKZ	Q13574	1117 aa		18.54	■□□□□ 0.56
NOD2-204	ENST00000527052	ALDH1L2	Q3SY69	923 aa		18.54	■□□□□ 0.56
NOD2-204	ENST00000527052	SSH1	Q8WYL5	1049 aa		18.54	■□□□□ 0.56
NOD2-204	ENST00000527052	DEFB129	Q9H1M3	183 aa		18.54	■□□□□ 0.56
NOD2-204	ENST00000527052	CCDC85C	A6NKD9	419 aa		18.53	■□□□□ 0.56
NOD2-204	ENST00000527052		F8W031	263 aa	Predicted RBP	18.53	■□□□□ 0.56
NOD2-204	ENST00000527052	CFAP100	Q494V2	611 aa		18.53	■□□□□ 0.56
NOD2-204	ENST00000527052	TDRD7	Q8NHU6	1098 aa	Known RBP	18.53	■□□□□ 0.56
NOD2-204	ENST00000527052	RIPOR2	Q9Y4F9	1068 aa		18.53	■□□□□ 0.56
NOD2-204	ENST00000527052	ECM29	Q5VYK3	1845 aa		18.52	■□□□□ 0.56
NOD2-204	ENST00000527052	ANKRD44	Q8N8A2	993 aa		18.52	■□□□□ 0.56
NOD2-204	ENST00000527052	PUS3	Q9BZE2	481 aa	Known RBP	18.52	■□□□□ 0.56
NOD2-204	ENST00000527052	CT47B1	P0C2W7	299 aa	Predicted RBP	18.51	■□□□□ 0.55
NOD2-204	ENST00000527052	GYG1	P46976	350 aa		18.51	■□□□□ 0.55
NOD2-204	ENST00000527052	SREBF2	Q12772	1141 aa		18.51	■□□□□ 0.55
NOD2-204	ENST00000527052	MFSD14B	Q5SR56	506 aa		18.51	■□□□□ 0.55
NOD2-204	ENST00000527052	LDLRAD1	Q5T700	205 aa		18.51	■□□□□ 0.55
NOD2-204	ENST00000527052	VPS37D	Q86XT2	251 aa		18.51	■□□□□ 0.55
NOD2-204	ENST00000527052	FAM84B	Q96KN1	310 aa	Predicted RBP	18.51	■□□□□ 0.55
NOD2-204	ENST00000527052	JAG2	Q9Y219	1238 aa		18.51	■□□□□ 0.55
NOD2-204	ENST00000527052	ARAP2	Q8WZ64	1704 aa		18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	UNCX	A6NJT0	531 aa		18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	PPP1R12B	O60237	982 aa	Predicted RBP	18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	TM4SF4	P48230	202 aa		18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	RBM5	P52756	815 aa	Known RBP eCLIP	18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	PTPN12	Q05209	780 aa	Known RBP	18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	SUPT20HL1	Q3ZLR7	823 aa		18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	METTL24	Q5JXM2	366 aa		18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	SMC4	Q9NTJ3	1288 aa		18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	SERPINA10	Q9UK55	444 aa		18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	ANGEL1	Q9UNK9	670 aa	Known RBP	18.5	■□□□□ 0.55
NOD2-204	ENST00000527052	CLRN2	A0PK11	232 aa		18.49	■□□□□ 0.55
NOD2-204	ENST00000527052	TNFAIP1	Q13829	316 aa		18.49	■□□□□ 0.55
NOD2-204	ENST00000527052	PRKG1	Q13976	671 aa		18.49	■□□□□ 0.55
NOD2-204	ENST00000527052	MAP3K11	Q16584	847 aa		18.49	■□□□□ 0.55
NOD2-204	ENST00000527052	CAVIN4	Q5BKX8	364 aa		18.49	■□□□□ 0.55
NOD2-204	ENST00000527052	PRMT6	Q96LA8	375 aa	Predicted RBP	18.49	■□□□□ 0.55
NOD2-204	ENST00000527052	USP44	Q9H0E7	712 aa		18.49	■□□□□ 0.55
NOD2-204	ENST00000527052	VEZT	Q9HBM0	779 aa		18.49	■□□□□ 0.55
NOD2-204	ENST00000527052	TTF2	Q9UNY4	1162 aa	Known RBP	18.49	■□□□□ 0.55
NOD2-204	ENST00000527052	PDE8B	O95263	885 aa		18.48	■□□□□ 0.55
NOD2-204	ENST00000527052	LRRC24	Q50LG9	513 aa		18.48	■□□□□ 0.55
NOD2-204	ENST00000527052	FBXO33	Q7Z6M2	555 aa		18.48	■□□□□ 0.55
NOD2-204	ENST00000527052	TBC1D22A	Q8WUA7	517 aa		18.48	■□□□□ 0.55
NOD2-204	ENST00000527052	PCDHAC2	Q9Y5I4	1007 aa		18.48	■□□□□ 0.55
NOD2-204	ENST00000527052	KIF16B	Q96L93	1317 aa		18.48	■□□□□ 0.55
NOD2-204	ENST00000527052	SSC5D	A1L4H1	1573 aa		18.47	■□□□□ 0.55
NOD2-204	ENST00000527052	NOM1	Q5C9Z4	860 aa	Known RBP	18.47	■□□□□ 0.55
NOD2-204	ENST00000527052	SPRYD7	Q5W111	196 aa		18.47	■□□□□ 0.55
NOD2-204	ENST00000527052	CTU1	Q7Z7A3	348 aa	Known RBP	18.47	■□□□□ 0.55
NOD2-204	ENST00000527052	TRMT2A	Q8IZ69	625 aa	Known RBP	18.47	■□□□□ 0.55
NOD2-204	ENST00000527052	VGLL2	Q8N8G2	317 aa		18.47	■□□□□ 0.55
NOD2-204	ENST00000527052	CCER2	I3L3R5	266 aa		18.46	■□□□□ 0.55
NOD2-204	ENST00000527052	FRAT2	O75474	233 aa	Predicted RBP	18.46	■□□□□ 0.55
NOD2-204	ENST00000527052	ZBTB48	P10074	688 aa	Predicted RBP	18.46	■□□□□ 0.55
NOD2-204	ENST00000527052	IREB2	P48200	963 aa	Known RBP	18.46	■□□□□ 0.55
NOD2-204	ENST00000527052	RGS19	P49795	217 aa		18.46	■□□□□ 0.55
NOD2-204	ENST00000527052	SPDYE2	Q495Y8	402 aa		18.46	■□□□□ 0.55
NOD2-204	ENST00000527052	SLC10A4	Q96EP9	437 aa		18.46	■□□□□ 0.55
NOD2-204	ENST00000527052	CDCA7L	Q96GN5	454 aa		18.46	■□□□□ 0.55
NOD2-204	ENST00000527052	CFHR5	Q9BXR6	569 aa		18.46	■□□□□ 0.55
NOD2-204	ENST00000527052	ALDH1A1	P00352	501 aa		18.45	■□□□□ 0.54
NOD2-204	ENST00000527052	IFIT1	P09914	478 aa	Known RBP	18.45	■□□□□ 0.54
NOD2-204	ENST00000527052	INHBE	P58166	350 aa		18.45	■□□□□ 0.54
NOD2-204	ENST00000527052	HDLBP	Q00341	1268 aa	Known RBP	18.45	■□□□□ 0.54
NOD2-204	ENST00000527052	MKRN3	Q13064	507 aa	Known RBP	18.45	■□□□□ 0.54
NOD2-204	ENST00000527052	RASA3	Q14644	834 aa		18.45	■□□□□ 0.54
NOD2-204	ENST00000527052	PUM3	Q15397	648 aa	Known RBP	18.45	■□□□□ 0.54
NOD2-204	ENST00000527052	ZNF70	Q9UC06	446 aa	Predicted RBP	18.45	■□□□□ 0.54
NOD2-204	ENST00000527052	HDAC5	Q9UQL6	1122 aa		18.45	■□□□□ 0.54
NOD2-204	ENST00000527052	MANSC4	A6NHS7	340 aa	Predicted RBP	18.44	■□□□□ 0.54
NOD2-204	ENST00000527052	CRK	P46108	304 aa		18.44	■□□□□ 0.54
NOD2-204	ENST00000527052	MLLT1	Q03111	559 aa	Predicted RBP	18.44	■□□□□ 0.54
NOD2-204	ENST00000527052	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.44	■□□□□ 0.54
NOD2-204	ENST00000527052	DZIP1L	Q8IYY4	767 aa	Known RBP	18.44	■□□□□ 0.54
NOD2-204	ENST00000527052	API5	Q9BZZ5	524 aa	Known RBP	18.44	■□□□□ 0.54
NOD2-204	ENST00000527052	AOX1	Q06278	1338 aa		18.44	■□□□□ 0.54
NOD2-204	ENST00000527052	EYA2	O00167	538 aa		18.43	■□□□□ 0.54
NOD2-204	ENST00000527052	TBC1D8	O95759	1140 aa		18.43	■□□□□ 0.54

Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms