RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 SIL1Q9H173 461 aa16.81■□□□□ 0.28
USH1C-203ENST00000526181 IPO8O15397 1037 aaKnown RBP16.8■□□□□ 0.28
USH1C-203ENST00000526181 ATG9AQ7Z3C6 839 aa16.8■□□□□ 0.28
USH1C-203ENST00000526181 IQSEC3Q9UPP2 1182 aaPredicted RBP16.8■□□□□ 0.28
USH1C-203ENST00000526181 PCDHAC2Q9Y5I4 1007 aa16.8■□□□□ 0.28
USH1C-203ENST00000526181 PITPNM2Q9BZ72 1349 aa16.79■□□□□ 0.28
USH1C-203ENST00000526181 AOC2O75106 756 aa16.79■□□□□ 0.28
USH1C-203ENST00000526181 PRAMEF18Q5VWM3 479 aa16.79■□□□□ 0.28
USH1C-203ENST00000526181 GBA2Q9HCG7 927 aaPredicted RBP16.79■□□□□ 0.28
USH1C-203ENST00000526181 HDAC9Q9UKV0 1011 aa16.79■□□□□ 0.28
USH1C-203ENST00000526181 PA2G4Q9UQ80 394 aaKnown RBP16.79■□□□□ 0.28
USH1C-203ENST00000526181 FAM205AQ6ZU69 1335 aa16.78■□□□□ 0.28
USH1C-203ENST00000526181 FOXN1O15353 648 aa16.78■□□□□ 0.28
USH1C-203ENST00000526181 FGFR2P21802 821 aa16.78■□□□□ 0.28
USH1C-203ENST00000526181 ECE1P42892 770 aa16.78■□□□□ 0.28
USH1C-203ENST00000526181 HUNKP57058 714 aa16.78■□□□□ 0.28
USH1C-203ENST00000526181 PUM3Q15397 648 aaKnown RBP16.78■□□□□ 0.28
USH1C-203ENST00000526181 COL13A1Q5TAT6 717 aaPredicted RBP16.78■□□□□ 0.28
USH1C-203ENST00000526181 FBXO33Q7Z6M2 555 aa16.78■□□□□ 0.28
USH1C-203ENST00000526181 ZBED3Q96IU2 234 aaPredicted RBP16.78■□□□□ 0.28
USH1C-203ENST00000526181 AOX1Q06278 1338 aa16.77■□□□□ 0.28
USH1C-203ENST00000526181 GNAI3P08754 354 aa16.77■□□□□ 0.28
USH1C-203ENST00000526181 BCAMP50895 628 aa16.77■□□□□ 0.28
USH1C-203ENST00000526181 FKBP1AP62942 108 aaKnown RBP16.77■□□□□ 0.28
USH1C-203ENST00000526181 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.28
USH1C-203ENST00000526181 ZKSCAN2Q63HK3 967 aa16.77■□□□□ 0.28
USH1C-203ENST00000526181 TMEM57Q8N5G2 664 aa16.77■□□□□ 0.28
USH1C-203ENST00000526181 HHIPL1Q96JK4 782 aa16.77■□□□□ 0.28
USH1C-203ENST00000526181 WBP1LQ9NX94 342 aa16.77■□□□□ 0.28
USH1C-203ENST00000526181 MMP14P50281 582 aa16.76■□□□□ 0.27
USH1C-203ENST00000526181 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
USH1C-203ENST00000526181 DLGAP5Q15398 846 aa16.76■□□□□ 0.27
USH1C-203ENST00000526181 GRIK5Q16478 980 aa16.76■□□□□ 0.27
USH1C-203ENST00000526181 CAVIN4Q5BKX8 364 aa16.76■□□□□ 0.27
USH1C-203ENST00000526181 VPS37DQ86XT2 251 aa16.76■□□□□ 0.27
USH1C-203ENST00000526181 C2orf69Q8N8R5 385 aa16.76■□□□□ 0.27
USH1C-203ENST00000526181 HDAC5Q9UQL6 1122 aa16.76■□□□□ 0.27
USH1C-203ENST00000526181 ARAP2Q8WZ64 1704 aa16.76■□□□□ 0.27
USH1C-203ENST00000526181 CIAO1O76071 339 aa16.75■□□□□ 0.27
USH1C-203ENST00000526181 CFAP100Q494V2 611 aa16.75■□□□□ 0.27
USH1C-203ENST00000526181 MOB2Q70IA6 237 aa16.75■□□□□ 0.27
USH1C-203ENST00000526181 CLRN2A0PK11 232 aa16.74■□□□□ 0.27
USH1C-203ENST00000526181 SRGAP3O43295 1099 aa16.74■□□□□ 0.27
USH1C-203ENST00000526181 IFIT1P09914 478 aaKnown RBP16.74■□□□□ 0.27
USH1C-203ENST00000526181 MTMR14Q8NCE2 650 aa16.74■□□□□ 0.27
USH1C-203ENST00000526181 LPIN2Q92539 896 aa16.74■□□□□ 0.27
USH1C-203ENST00000526181 AIDAQ96BJ3 306 aa16.74■□□□□ 0.27
USH1C-203ENST00000526181 PRMT6Q96LA8 375 aaPredicted RBP16.74■□□□□ 0.27
USH1C-203ENST00000526181 ZIC5Q96T25 663 aa16.74■□□□□ 0.27
USH1C-203ENST00000526181 COPRSQ9NQ92 184 aa16.74■□□□□ 0.27
USH1C-203ENST00000526181 COL1A1P02452 1464 aaPredicted RBP16.73■□□□□ 0.27
USH1C-203ENST00000526181 POLR2AP24928 1970 aaKnown RBP16.73■□□□□ 0.27
USH1C-203ENST00000526181 SPDYE2BA6NHP3 402 aa16.73■□□□□ 0.27
USH1C-203ENST00000526181 FRAT2O75474 233 aaPredicted RBP16.73■□□□□ 0.27
USH1C-203ENST00000526181 SPDYE6P0CI01 402 aa16.73■□□□□ 0.27
USH1C-203ENST00000526181 RLBP1P12271 317 aa16.73■□□□□ 0.27
USH1C-203ENST00000526181 SLC5A1P13866 664 aa16.73■□□□□ 0.27
USH1C-203ENST00000526181 IL15P40933 162 aaPredicted RBP16.73■□□□□ 0.27
USH1C-203ENST00000526181 RBM5P52756 815 aaKnown RBP eCLIP16.73■□□□□ 0.27
USH1C-203ENST00000526181 MAP2K1Q02750 393 aaPredicted RBP16.73■□□□□ 0.27
USH1C-203ENST00000526181 MTX1Q13505 466 aa16.73■□□□□ 0.27
USH1C-203ENST00000526181 RGMBQ6NW40 437 aa16.73■□□□□ 0.27
USH1C-203ENST00000526181 FBXO3Q9UK99 471 aa16.73■□□□□ 0.27
USH1C-203ENST00000526181 TTF2Q9UNY4 1162 aaKnown RBP16.73■□□□□ 0.27
USH1C-203ENST00000526181 PAPPA2Q9BXP8 1791 aa16.72■□□□□ 0.27
USH1C-203ENST00000526181 PNMA6EA0A0J9YXQ4 647 aa16.72■□□□□ 0.27
USH1C-203ENST00000526181 FAM155AB1AL88 458 aaPredicted RBP16.72■□□□□ 0.27
USH1C-203ENST00000526181 GNAI2P04899 355 aa16.72■□□□□ 0.27
USH1C-203ENST00000526181 ATP2B3Q16720 1220 aa16.72■□□□□ 0.27
USH1C-203ENST00000526181 APOBEC3FQ8IUX4 373 aaKnown RBP16.72■□□□□ 0.27
USH1C-203ENST00000526181 CEP126Q9P2H0 1117 aa16.72■□□□□ 0.27
USH1C-203ENST00000526181 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
USH1C-203ENST00000526181 PCNTO95613 3336 aa16.72■□□□□ 0.27
USH1C-203ENST00000526181 MAP2K2P36507 400 aa16.71■□□□□ 0.27
USH1C-203ENST00000526181 ZNF157P51786 506 aaPredicted RBP16.71■□□□□ 0.27
USH1C-203ENST00000526181 FTSJ3Q8IY81 847 aaKnown RBP16.71■□□□□ 0.27
USH1C-203ENST00000526181 DZIP1LQ8IYY4 767 aaKnown RBP16.71■□□□□ 0.27
USH1C-203ENST00000526181 UBE2Q2LH0YL09 131 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 HSPA8P11142 646 aaKnown RBP16.7■□□□□ 0.26
USH1C-203ENST00000526181 ADORA1P30542 326 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 CRKP46108 304 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 CTCFP49711 727 aaPredicted RBP16.7■□□□□ 0.26
USH1C-203ENST00000526181 PRKG1Q13976 671 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 ITPRIPQ8IWB1 547 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 DEFB129Q9H1M3 183 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 C1orf115Q9H7X2 142 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 VEZTQ9HBM0 779 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 SERPINA10Q9UK55 444 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 FZD1Q9UP38 647 aa16.7■□□□□ 0.26
USH1C-203ENST00000526181 SSC5DA1L4H1 1573 aa16.69■□□□□ 0.26
USH1C-203ENST00000526181 MYO1BO43795 1136 aa16.69■□□□□ 0.26
USH1C-203ENST00000526181 LBX1P52954 281 aa16.69■□□□□ 0.26
USH1C-203ENST00000526181 FKBP1BP68106 108 aa16.69■□□□□ 0.26
USH1C-203ENST00000526181 TFCP2Q12800 502 aa16.69■□□□□ 0.26
USH1C-203ENST00000526181 NOGQ13253 232 aa16.69■□□□□ 0.26
USH1C-203ENST00000526181 TBC1D22AQ8WUA7 517 aa16.69■□□□□ 0.26
USH1C-203ENST00000526181 TDRD3Q9H7E2 651 aaKnown RBP16.69■□□□□ 0.26
USH1C-203ENST00000526181 TSKSQ9UJT2 592 aa16.69■□□□□ 0.26
USH1C-203ENST00000526181 ECM29Q5VYK3 1845 aa16.68■□□□□ 0.26
USH1C-203ENST00000526181 SLC10A3P09131 477 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms