RNA–Protein interactions for RNA: ENST00000524533.1

HIF3A-208, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 507 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-208ENST00000524533 ARAP2Q8WZ64 1704 aa20.59■□□□□ 0.89
HIF3A-208ENST00000524533 IL1R1P14778 569 aa20.59■□□□□ 0.89
HIF3A-208ENST00000524533 PLIN1O60240 522 aa20.58■□□□□ 0.89
HIF3A-208ENST00000524533 MLLT1Q03111 559 aaPredicted RBP20.58■□□□□ 0.89
HIF3A-208ENST00000524533 ARMC9Q7Z3E5 817 aa20.58■□□□□ 0.89
HIF3A-208ENST00000524533 F8W031 263 aaPredicted RBP20.57■□□□□ 0.88
HIF3A-208ENST00000524533 RGS19P49795 217 aa20.57■□□□□ 0.88
HIF3A-208ENST00000524533 PRKG1Q13976 671 aa20.57■□□□□ 0.88
HIF3A-208ENST00000524533 MTMR14Q8NCE2 650 aa20.57■□□□□ 0.88
HIF3A-208ENST00000524533 ZNF521Q96K83 1311 aa20.56■□□□□ 0.88
HIF3A-208ENST00000524533 FKBP1AP62942 108 aaKnown RBP20.56■□□□□ 0.88
HIF3A-208ENST00000524533 JAG2Q9Y219 1238 aa20.56■□□□□ 0.88
HIF3A-208ENST00000524533 MYO1BO43795 1136 aa20.55■□□□□ 0.88
HIF3A-208ENST00000524533 PTPN12Q05209 780 aaKnown RBP20.55■□□□□ 0.88
HIF3A-208ENST00000524533 MKRN3Q13064 507 aaKnown RBP20.55■□□□□ 0.88
HIF3A-208ENST00000524533 CFAP100Q494V2 611 aa20.55■□□□□ 0.88
HIF3A-208ENST00000524533 SUCLG2Q96I99 432 aa20.55■□□□□ 0.88
HIF3A-208ENST00000524533 DEFB129Q9H1M3 183 aa20.55■□□□□ 0.88
HIF3A-208ENST00000524533 ANGEL1Q9UNK9 670 aaKnown RBP20.55■□□□□ 0.88
HIF3A-208ENST00000524533 PCDHAC2Q9Y5I4 1007 aa20.55■□□□□ 0.88
HIF3A-208ENST00000524533 SSC5DA1L4H1 1573 aa20.55■□□□□ 0.88
HIF3A-208ENST00000524533 SREBF2Q12772 1141 aa20.54■□□□□ 0.88
HIF3A-208ENST00000524533 CTU1Q7Z7A3 348 aaKnown RBP20.54■□□□□ 0.88
HIF3A-208ENST00000524533 PPP2R3BQ9Y5P8 575 aa20.54■□□□□ 0.88
HIF3A-208ENST00000524533 CLRN2A0PK11 232 aa20.53■□□□□ 0.88
HIF3A-208ENST00000524533 SPDYE2BA6NHP3 402 aa20.53■□□□□ 0.88
HIF3A-208ENST00000524533 NBPF7P0C2Y1 421 aaPredicted RBP20.53■□□□□ 0.88
HIF3A-208ENST00000524533 SPDYE6P0CI01 402 aa20.53■□□□□ 0.88
HIF3A-208ENST00000524533 LAMB1P07942 1786 aa20.52■□□□□ 0.88
HIF3A-208ENST00000524533 TBC1D8O95759 1140 aa20.52■□□□□ 0.88
HIF3A-208ENST00000524533 TM4SF4P48230 202 aa20.52■□□□□ 0.88
HIF3A-208ENST00000524533 UBE4AQ14139 1066 aa20.52■□□□□ 0.88
HIF3A-208ENST00000524533 LDLRAD1Q5T700 205 aa20.52■□□□□ 0.88
HIF3A-208ENST00000524533 KAZALD1Q96I82 304 aa20.52■□□□□ 0.88
HIF3A-208ENST00000524533 VEZTQ9HBM0 779 aa20.52■□□□□ 0.88
HIF3A-208ENST00000524533 FZD1Q9UP38 647 aa20.52■□□□□ 0.88
HIF3A-208ENST00000524533 UTYO14607 1347 aa20.52■□□□□ 0.87
HIF3A-208ENST00000524533 FAM205AQ6ZU69 1335 aa20.52■□□□□ 0.87
HIF3A-208ENST00000524533 GYG1P46976 350 aa20.51■□□□□ 0.87
HIF3A-208ENST00000524533 RBM5P52756 815 aaKnown RBP eCLIP20.51■□□□□ 0.87
HIF3A-208ENST00000524533 PUS3Q9BZE2 481 aaKnown RBP20.51■□□□□ 0.87
HIF3A-208ENST00000524533 MROH5Q6ZUA9 1318 aa20.51■□□□□ 0.87
HIF3A-208ENST00000524533 HIBADHP31937 336 aaKnown RBP20.5■□□□□ 0.87
HIF3A-208ENST00000524533 MFSD14BQ5SR56 506 aa20.5■□□□□ 0.87
HIF3A-208ENST00000524533 SPRYD7Q5W111 196 aa20.5■□□□□ 0.87
HIF3A-208ENST00000524533 MRPL50Q8N5N7 158 aaKnown RBP20.5■□□□□ 0.87
HIF3A-208ENST00000524533 TDRD7Q8NHU6 1098 aaKnown RBP20.5■□□□□ 0.87
HIF3A-208ENST00000524533 ZNF296Q8WUU4 475 aaPredicted RBP20.5■□□□□ 0.87
HIF3A-208ENST00000524533 PRMT6Q96LA8 375 aaPredicted RBP20.5■□□□□ 0.87
HIF3A-208ENST00000524533 BICC1Q9H694 974 aaKnown RBP20.5■□□□□ 0.87
HIF3A-208ENST00000524533 PTPRCP08575 1304 aa20.5■□□□□ 0.87
HIF3A-208ENST00000524533 AOX1Q06278 1338 aa20.5■□□□□ 0.87
HIF3A-208ENST00000524533 PPP1R12BO60237 982 aaPredicted RBP20.49■□□□□ 0.87
HIF3A-208ENST00000524533 MAP3K11Q16584 847 aa20.49■□□□□ 0.87
HIF3A-208ENST00000524533 RABL6Q3YEC7 729 aaPredicted RBP20.49■□□□□ 0.87
HIF3A-208ENST00000524533 OTOFQ9HC10 1997 aa20.48■□□□□ 0.87
HIF3A-208ENST00000524533 SUPT20HL1Q3ZLR7 823 aa20.48■□□□□ 0.87
HIF3A-208ENST00000524533 FAM84BQ96KN1 310 aaPredicted RBP20.48■□□□□ 0.87
HIF3A-208ENST00000524533 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.48■□□□□ 0.87
HIF3A-208ENST00000524533 TTF2Q9UNY4 1162 aaKnown RBP20.48■□□□□ 0.87
HIF3A-208ENST00000524533 RIPOR2Q9Y4F9 1068 aa20.48■□□□□ 0.87
HIF3A-208ENST00000524533 E9PSI1 815 aa20.47■□□□□ 0.87
HIF3A-208ENST00000524533 GPR25O00155 361 aa20.47■□□□□ 0.87
HIF3A-208ENST00000524533 SOX10P56693 466 aa20.47■□□□□ 0.87
HIF3A-208ENST00000524533 NOM1Q5C9Z4 860 aaKnown RBP20.47■□□□□ 0.87
HIF3A-208ENST00000524533 ANKRD44Q8N8A2 993 aa20.47■□□□□ 0.87
HIF3A-208ENST00000524533 SLC10A4Q96EP9 437 aa20.47■□□□□ 0.87
HIF3A-208ENST00000524533 TNRC18O15417 2968 aaPredicted RBP20.46■□□□□ 0.87
HIF3A-208ENST00000524533 ZBTB48P10074 688 aaPredicted RBP20.46■□□□□ 0.87
HIF3A-208ENST00000524533 TNFAIP1Q13829 316 aa20.46■□□□□ 0.87
HIF3A-208ENST00000524533 METTL24Q5JXM2 366 aa20.46■□□□□ 0.87
HIF3A-208ENST00000524533 NBPF12Q5TAG4 269 aaPredicted RBP20.46■□□□□ 0.87
HIF3A-208ENST00000524533 VPS37DQ86XT2 251 aa20.46■□□□□ 0.87
HIF3A-208ENST00000524533 CLMNQ96JQ2 1002 aa20.46■□□□□ 0.87
HIF3A-208ENST00000524533 CFHR5Q9BXR6 569 aa20.46■□□□□ 0.87
HIF3A-208ENST00000524533 SERPINA10Q9UK55 444 aa20.46■□□□□ 0.87
HIF3A-208ENST00000524533 MANSC4A6NHS7 340 aaPredicted RBP20.45■□□□□ 0.86
HIF3A-208ENST00000524533 ALDH1A1P00352 501 aa20.45■□□□□ 0.86
HIF3A-208ENST00000524533 IREB2P48200 963 aaKnown RBP20.45■□□□□ 0.86
HIF3A-208ENST00000524533 RASA3Q14644 834 aa20.45■□□□□ 0.86
HIF3A-208ENST00000524533 PKN2Q16513 984 aaKnown RBP20.45■□□□□ 0.86
HIF3A-208ENST00000524533 SPDYE2Q495Y8 402 aa20.45■□□□□ 0.86
HIF3A-208ENST00000524533 LRRC24Q50LG9 513 aa20.45■□□□□ 0.86
HIF3A-208ENST00000524533 SSH1Q8WYL5 1049 aa20.45■□□□□ 0.86
HIF3A-208ENST00000524533 WNK4Q96J92 1243 aa20.45■□□□□ 0.86
HIF3A-208ENST00000524533 HPS5Q9UPZ3 1129 aa20.45■□□□□ 0.86
HIF3A-208ENST00000524533 UNCXA6NJT0 531 aa20.44■□□□□ 0.86
HIF3A-208ENST00000524533 TDRD3Q9H7E2 651 aaKnown RBP20.44■□□□□ 0.86
HIF3A-208ENST00000524533 ZNF70Q9UC06 446 aaPredicted RBP20.44■□□□□ 0.86
HIF3A-208ENST00000524533 IQSEC3Q9UPP2 1182 aaPredicted RBP20.44■□□□□ 0.86
HIF3A-208ENST00000524533 FKTNO75072 461 aa20.43■□□□□ 0.86
HIF3A-208ENST00000524533 CRKP46108 304 aa20.43■□□□□ 0.86
HIF3A-208ENST00000524533 INHBEP58166 350 aa20.43■□□□□ 0.86
HIF3A-208ENST00000524533 CHAF1AQ13111 956 aaPredicted RBP20.43■□□□□ 0.86
HIF3A-208ENST00000524533 CAVIN4Q5BKX8 364 aa20.43■□□□□ 0.86
HIF3A-208ENST00000524533 MYH13Q9UKX3 1938 aa20.43■□□□□ 0.86
HIF3A-208ENST00000524533 FRAT2O75474 233 aaPredicted RBP20.42■□□□□ 0.86
HIF3A-208ENST00000524533 PDE8BO95263 885 aa20.42■□□□□ 0.86
HIF3A-208ENST00000524533 FBXO33Q7Z6M2 555 aa20.42■□□□□ 0.86
HIF3A-208ENST00000524533 IFNL1Q8IU54 200 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms