RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 TOMM70O94826 608 aa8.67□□□□□ -1.02
VPS11-201ENST00000524454 HOXB3P14651 431 aaPredicted RBP8.67□□□□□ -1.02
VPS11-201ENST00000524454 RPS8P62241 208 aaKnown RBP8.67□□□□□ -1.02
VPS11-201ENST00000524454 EPHA10Q5JZY3 1008 aa8.67□□□□□ -1.02
VPS11-201ENST00000524454 PLEKHM2Q8IWE5 1019 aa8.67□□□□□ -1.02
VPS11-201ENST00000524454 NIM1KQ8IY84 436 aa8.67□□□□□ -1.02
VPS11-201ENST00000524454 TTLL11Q8NHH1 800 aa8.67□□□□□ -1.02
VPS11-201ENST00000524454 JDP2Q8WYK2 163 aa8.67□□□□□ -1.02
VPS11-201ENST00000524454 STAP2Q9UGK3 403 aa8.67□□□□□ -1.02
VPS11-201ENST00000524454 POLLQ9UGP5 575 aa8.67□□□□□ -1.02
VPS11-201ENST00000524454 LRRFIP2Q9Y608 721 aaKnown RBP8.67□□□□□ -1.02
VPS11-201ENST00000524454 SCN9AQ15858 1988 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 C6orf229H3BNL8 230 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 FZD9O00144 591 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 CDC45O75419 566 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 VEGFAP15692 232 aaPredicted RBP8.66□□□□□ -1.02
VPS11-201ENST00000524454 EIF6P56537 245 aaKnown RBP8.66□□□□□ -1.02
VPS11-201ENST00000524454 HTRA3P83110 453 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 FOXK1P85037 733 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 DOK7Q18PE1 504 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 TTC22Q5TAA0 569 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 SKAP1Q86WV1 359 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 TICAM2Q86XR7 235 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 ANKRD18AQ8IVF6 992 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 KIF1BPQ96EK5 621 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 LARP6Q9BRS8 491 aaKnown RBP8.66□□□□□ -1.02
VPS11-201ENST00000524454 RTFDC1Q9BY42 306 aaPredicted RBP8.66□□□□□ -1.02
VPS11-201ENST00000524454 DBNDD1Q9H9R9 158 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 ANKIB1Q9P2G1 1089 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 CHMP3Q9Y3E7 222 aa8.66□□□□□ -1.02
VPS11-201ENST00000524454 YDJCA8MPS7 323 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 RAD17O75943 681 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 UFL1O94874 794 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 HSP90B1P14625 803 aaKnown RBP8.65□□□□□ -1.02
VPS11-201ENST00000524454 ITGA6P23229 1130 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 RBM25P49756 843 aaKnown RBP8.65□□□□□ -1.02
VPS11-201ENST00000524454 FOXO4P98177 505 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 EAPPQ56P03 285 aaPredicted RBP8.65□□□□□ -1.02
VPS11-201ENST00000524454 CASC1Q6TDU7 716 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 SUPT20HQ8NEM7 779 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 TBC1D16Q8TBP0 767 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 SUCLG2Q96I99 432 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 ZNF594Q96JF6 807 aaPredicted RBP8.65□□□□□ -1.02
VPS11-201ENST00000524454 KCNQ5Q9NR82 932 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 C9orf78Q9NZ63 289 aaPredicted RBP8.65□□□□□ -1.02
VPS11-201ENST00000524454 ADAMTSL1Q8N6G6 1762 aa8.65□□□□□ -1.02
VPS11-201ENST00000524454 ZNF646O15015 1829 aaPredicted RBP8.64□□□□□ -1.03
VPS11-201ENST00000524454 TTC41PQ6P2S7 1318 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 PNMA6EA0A0J9YXQ4 647 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 SHTN1A0MZ66 631 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 SRGAP3O43295 1099 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 NBPF7P0C2Y1 421 aaPredicted RBP8.64□□□□□ -1.03
VPS11-201ENST00000524454 HSPA6P17066 643 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 KIAA2012Q0VF49 1180 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 BECN1Q14457 450 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 WASHC4Q2M389 1173 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 RABL6Q3YEC7 729 aaPredicted RBP8.64□□□□□ -1.03
VPS11-201ENST00000524454 GRIPAP1Q4V328 841 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 PPP1R15BQ5SWA1 713 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 LMBR1LQ6UX01 489 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 TMC4Q7Z404 712 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 RBM46Q8TBY0 533 aaKnown RBP8.64□□□□□ -1.03
VPS11-201ENST00000524454 CDC5LQ99459 802 aaKnown RBP8.64□□□□□ -1.03
VPS11-201ENST00000524454 PLA2G12BQ9BX93 195 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 TAF1DQ9H5J8 278 aaPredicted RBP8.64□□□□□ -1.03
VPS11-201ENST00000524454 PSME4Q14997 1843 aa8.64□□□□□ -1.03
VPS11-201ENST00000524454 RTL9Q8NET4 1388 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 SNAP23O00161 211 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 ECE2O60344 883 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 CSF1RP07333 972 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 MX1P20591 662 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 EPHX2P34913 555 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 EPS15P42566 896 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 GMPSP49915 693 aaPredicted RBP8.63□□□□□ -1.03
VPS11-201ENST00000524454 SCNN1DP51172 638 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 PDE1AP54750 535 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 CXCL9Q07325 125 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 LCE2DQ5TA82 110 aaPredicted RBP8.63□□□□□ -1.03
VPS11-201ENST00000524454 PLPP6Q8IY26 295 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 GPC2Q8N158 579 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 SMC1BQ8NDV3 1235 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 HELBQ8NG08 1087 aaPredicted RBP8.63□□□□□ -1.03
VPS11-201ENST00000524454 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
VPS11-201ENST00000524454 KAZALD1Q96I82 304 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 HACL1Q9UJ83 578 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 GGA1Q9UJY5 639 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 ZNRF3Q9ULT6 936 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 MINPP1Q9UNW1 487 aa8.63□□□□□ -1.03
VPS11-201ENST00000524454 XDHP47989 1333 aa8.62□□□□□ -1.03
VPS11-201ENST00000524454 ANKRD18BA2A2Z9 1011 aa8.62□□□□□ -1.03
VPS11-201ENST00000524454 PSMD14O00487 310 aa8.62□□□□□ -1.03
VPS11-201ENST00000524454 TAF5LO75529 589 aa8.62□□□□□ -1.03
VPS11-201ENST00000524454 GSPT1P15170 499 aaKnown RBP8.62□□□□□ -1.03
VPS11-201ENST00000524454 KLRK1P26718 216 aa8.62□□□□□ -1.03
VPS11-201ENST00000524454 IGHMBP2P38935 993 aaKnown RBP8.62□□□□□ -1.03
VPS11-201ENST00000524454 CIAPIN1Q6FI81 312 aa8.62□□□□□ -1.03
VPS11-201ENST00000524454 GPATCH3Q96I76 525 aa8.62□□□□□ -1.03
VPS11-201ENST00000524454 BICC1Q9H694 974 aaKnown RBP8.62□□□□□ -1.03
VPS11-201ENST00000524454 COPRSQ9NQ92 184 aa8.62□□□□□ -1.03
VPS11-201ENST00000524454 BSDC1Q9NW68 430 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms