RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 DLGAP5Q15398 846 aa19.57■□□□□ 0.72
MRPS28-209ENST00000522987 CCDC57Q2TAC2 916 aa19.57■□□□□ 0.72
MRPS28-209ENST00000522987 NCBP3Q53F19 620 aaKnown RBP19.57■□□□□ 0.72
MRPS28-209ENST00000522987 APOBEC3FQ8IUX4 373 aaKnown RBP19.57■□□□□ 0.72
MRPS28-209ENST00000522987 CNNM1Q9NRU3 951 aa19.57■□□□□ 0.72
MRPS28-209ENST00000522987 LDHAL6AQ6ZMR3 332 aa19.56■□□□□ 0.72
MRPS28-209ENST00000522987 ZNF804AQ7Z570 1209 aa19.56■□□□□ 0.72
MRPS28-209ENST00000522987 ZBED3Q96IU2 234 aaPredicted RBP19.56■□□□□ 0.72
MRPS28-209ENST00000522987 RGS19P49795 217 aa19.55■□□□□ 0.72
MRPS28-209ENST00000522987 CFAP100Q494V2 611 aa19.55■□□□□ 0.72
MRPS28-209ENST00000522987 SUCLG2Q96I99 432 aa19.55■□□□□ 0.72
MRPS28-209ENST00000522987 PUS3Q9BZE2 481 aaKnown RBP19.55■□□□□ 0.72
MRPS28-209ENST00000522987 VEZTQ9HBM0 779 aa19.55■□□□□ 0.72
MRPS28-209ENST00000522987 ARAP2Q8WZ64 1704 aa19.54■□□□□ 0.72
MRPS28-209ENST00000522987 OTOFQ9HC10 1997 aa19.54■□□□□ 0.72
MRPS28-209ENST00000522987 RBM5P52756 815 aaKnown RBP eCLIP19.54■□□□□ 0.72
MRPS28-209ENST00000522987 ARMC9Q7Z3E5 817 aa19.54■□□□□ 0.72
MRPS28-209ENST00000522987 CTU1Q7Z7A3 348 aaKnown RBP19.54■□□□□ 0.72
MRPS28-209ENST00000522987 SRCIN1Q9C0H9 1055 aa19.54■□□□□ 0.72
MRPS28-209ENST00000522987 SSC5DA1L4H1 1573 aa19.53■□□□□ 0.72
MRPS28-209ENST00000522987 GYG1P46976 350 aa19.53■□□□□ 0.72
MRPS28-209ENST00000522987 ZNF296Q8WUU4 475 aaPredicted RBP19.53■□□□□ 0.72
MRPS28-209ENST00000522987 DEFB129Q9H1M3 183 aa19.53■□□□□ 0.72
MRPS28-209ENST00000522987 IL1R1P14778 569 aa19.52■□□□□ 0.72
MRPS28-209ENST00000522987 C15orf52Q6ZUT6 534 aaKnown RBP19.52■□□□□ 0.72
MRPS28-209ENST00000522987 REM2Q8IYK8 340 aaPredicted RBP19.52■□□□□ 0.72
MRPS28-209ENST00000522987 CLMNQ96JQ2 1002 aa19.52■□□□□ 0.72
MRPS28-209ENST00000522987 PRMT6Q96LA8 375 aaPredicted RBP19.52■□□□□ 0.72
MRPS28-209ENST00000522987 R3HDMLQ9H3Y0 253 aa19.52■□□□□ 0.72
MRPS28-209ENST00000522987 IQSEC3Q9UPP2 1182 aaPredicted RBP19.52■□□□□ 0.72
MRPS28-209ENST00000522987 MYH13Q9UKX3 1938 aa19.52■□□□□ 0.72
MRPS28-209ENST00000522987 NBPF7P0C2Y1 421 aaPredicted RBP19.51■□□□□ 0.71
MRPS28-209ENST00000522987 KAZALD1Q96I82 304 aa19.51■□□□□ 0.71
MRPS28-209ENST00000522987 TNRC18O15417 2968 aaPredicted RBP19.51■□□□□ 0.71
MRPS28-209ENST00000522987 ALDH1L1O75891 902 aa19.5■□□□□ 0.71
MRPS28-209ENST00000522987 ZEB1P37275 1124 aaPredicted RBP19.5■□□□□ 0.71
MRPS28-209ENST00000522987 SPRYD7Q5W111 196 aa19.5■□□□□ 0.71
MRPS28-209ENST00000522987 SPDYE2BA6NHP3 402 aa19.49■□□□□ 0.71
MRPS28-209ENST00000522987 SPDYE6P0CI01 402 aa19.49■□□□□ 0.71
MRPS28-209ENST00000522987 TM4SF4P48230 202 aa19.49■□□□□ 0.71
MRPS28-209ENST00000522987 LDLRAD1Q5T700 205 aa19.49■□□□□ 0.71
MRPS28-209ENST00000522987 NBPF12Q5TAG4 269 aaPredicted RBP19.49■□□□□ 0.71
MRPS28-209ENST00000522987 SLC10A4Q96EP9 437 aa19.49■□□□□ 0.71
MRPS28-209ENST00000522987 BICC1Q9H694 974 aaKnown RBP19.49■□□□□ 0.71
MRPS28-209ENST00000522987 COL1A1P02452 1464 aaPredicted RBP19.48■□□□□ 0.71
MRPS28-209ENST00000522987 GPR25O00155 361 aa19.48■□□□□ 0.71
MRPS28-209ENST00000522987 MYO1BO43795 1136 aa19.48■□□□□ 0.71
MRPS28-209ENST00000522987 MMP14P50281 582 aa19.48■□□□□ 0.71
MRPS28-209ENST00000522987 SREBF2Q12772 1141 aa19.48■□□□□ 0.71
MRPS28-209ENST00000522987 CHAF1AQ13111 956 aaPredicted RBP19.48■□□□□ 0.71
MRPS28-209ENST00000522987 MFSD14BQ5SR56 506 aa19.48■□□□□ 0.71
MRPS28-209ENST00000522987 MTMR14Q8NCE2 650 aa19.48■□□□□ 0.71
MRPS28-209ENST00000522987 HPS5Q9UPZ3 1129 aa19.48■□□□□ 0.71
MRPS28-209ENST00000522987 PDE4DIPQ5VU43 2346 aa19.48■□□□□ 0.71
MRPS28-209ENST00000522987 LAMB1P07942 1786 aa19.47■□□□□ 0.71
MRPS28-209ENST00000522987 GRIK5Q16478 980 aa19.47■□□□□ 0.71
MRPS28-209ENST00000522987 LRRC24Q50LG9 513 aa19.47■□□□□ 0.71
MRPS28-209ENST00000522987 KLHDC4Q8TBB5 520 aa19.47■□□□□ 0.71
MRPS28-209ENST00000522987 FAM84BQ96KN1 310 aaPredicted RBP19.47■□□□□ 0.71
MRPS28-209ENST00000522987 TDRD3Q9H7E2 651 aaKnown RBP19.47■□□□□ 0.71
MRPS28-209ENST00000522987 TTF2Q9UNY4 1162 aaKnown RBP19.47■□□□□ 0.71
MRPS28-209ENST00000522987 HIBADHP31937 336 aaKnown RBP19.46■□□□□ 0.71
MRPS28-209ENST00000522987 RASA3Q14644 834 aa19.46■□□□□ 0.71
MRPS28-209ENST00000522987 CDAN1Q8IWY9 1227 aa19.46■□□□□ 0.71
MRPS28-209ENST00000522987 MRPL50Q8N5N7 158 aaKnown RBP19.46■□□□□ 0.71
MRPS28-209ENST00000522987 TDRD7Q8NHU6 1098 aaKnown RBP19.46■□□□□ 0.71
MRPS28-209ENST00000522987 WNK4Q96J92 1243 aa19.46■□□□□ 0.71
MRPS28-209ENST00000522987 AK9Q5TCS8 1911 aa19.45■□□□□ 0.7
MRPS28-209ENST00000522987 PPP1R12BO60237 982 aaPredicted RBP19.45■□□□□ 0.7
MRPS28-209ENST00000522987 FKBP1AP62942 108 aaKnown RBP19.45■□□□□ 0.7
MRPS28-209ENST00000522987 UBE4AQ14139 1066 aa19.45■□□□□ 0.7
MRPS28-209ENST00000522987 ZNF70Q9UC06 446 aaPredicted RBP19.45■□□□□ 0.7
MRPS28-209ENST00000522987 FAM205AQ6ZU69 1335 aa19.45■□□□□ 0.7
MRPS28-209ENST00000522987 ZNF521Q96K83 1311 aa19.45■□□□□ 0.7
MRPS28-209ENST00000522987 TCP10L2B9ZVM9 353 aa19.44■□□□□ 0.7
MRPS28-209ENST00000522987 FKTNO75072 461 aa19.44■□□□□ 0.7
MRPS28-209ENST00000522987 METTL24Q5JXM2 366 aa19.44■□□□□ 0.7
MRPS28-209ENST00000522987 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
MRPS28-209ENST00000522987 RIPOR2Q9Y4F9 1068 aa19.44■□□□□ 0.7
MRPS28-209ENST00000522987 PPP2R3BQ9Y5P8 575 aa19.44■□□□□ 0.7
MRPS28-209ENST00000522987 IGF2BP3O00425 579 aaKnown RBP eCLIP19.43■□□□□ 0.7
MRPS28-209ENST00000522987 USP2O75604 605 aaPredicted RBP19.43■□□□□ 0.7
MRPS28-209ENST00000522987 GJA5P36382 358 aa19.43■□□□□ 0.7
MRPS28-209ENST00000522987 SUPT20HL1Q3ZLR7 823 aa19.43■□□□□ 0.7
MRPS28-209ENST00000522987 VPS37DQ86XT2 251 aa19.43■□□□□ 0.7
MRPS28-209ENST00000522987 ELP3Q9H9T3 547 aa19.43■□□□□ 0.7
MRPS28-209ENST00000522987 MANSC4A6NHS7 340 aaPredicted RBP19.42■□□□□ 0.7
MRPS28-209ENST00000522987 FRAT2O75474 233 aaPredicted RBP19.42■□□□□ 0.7
MRPS28-209ENST00000522987 CRKP46108 304 aa19.42■□□□□ 0.7
MRPS28-209ENST00000522987 CACNB3P54284 484 aa19.42■□□□□ 0.7
MRPS28-209ENST00000522987 MAP3K11Q16584 847 aa19.42■□□□□ 0.7
MRPS28-209ENST00000522987 IFNL1Q8IU54 200 aa19.42■□□□□ 0.7
MRPS28-209ENST00000522987 SSH1Q8WYL5 1049 aa19.42■□□□□ 0.7
MRPS28-209ENST00000522987 IREB2P48200 963 aaKnown RBP19.41■□□□□ 0.7
MRPS28-209ENST00000522987 SPDYE2Q495Y8 402 aa19.41■□□□□ 0.7
MRPS28-209ENST00000522987 DZIP1LQ8IYY4 767 aaKnown RBP19.41■□□□□ 0.7
MRPS28-209ENST00000522987 CNKSR2Q8WXI2 1034 aa19.41■□□□□ 0.7
MRPS28-209ENST00000522987 TMEM39BQ9GZU3 492 aa19.41■□□□□ 0.7
MRPS28-209ENST00000522987 UTYO14607 1347 aa19.41■□□□□ 0.7
MRPS28-209ENST00000522987 MROH5Q6ZUA9 1318 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms