RNA–Protein interactions for RNA: ENST00000522502.1

CLU-213, Transcript of clusterin, human

TSL 2

Gene CLU, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLU-213	ENST00000522502	ZNF316	A6NFI3	1004 aa	Predicted RBP	12.86	□□□□□ -0.35
CLU-213	ENST00000522502	GYG1	P46976	350 aa		12.86	□□□□□ -0.35
CLU-213	ENST00000522502	ANKRD2	Q9GZV1	360 aa		12.86	□□□□□ -0.35
CLU-213	ENST00000522502	MYH16	Q9H6N6	1097 aa		12.86	□□□□□ -0.35
CLU-213	ENST00000522502	ANGEL1	Q9UNK9	670 aa	Known RBP	12.86	□□□□□ -0.35
CLU-213	ENST00000522502	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	12.86	□□□□□ -0.35
CLU-213	ENST00000522502	ANP32C	O43423	234 aa		12.85	□□□□□ -0.35
CLU-213	ENST00000522502	CAP1	Q01518	475 aa		12.85	□□□□□ -0.35
CLU-213	ENST00000522502	IFIT5	Q13325	482 aa	Known RBP	12.85	□□□□□ -0.35
CLU-213	ENST00000522502	CFAP100	Q494V2	611 aa		12.85	□□□□□ -0.35
CLU-213	ENST00000522502	OGFOD1	Q8N543	542 aa		12.85	□□□□□ -0.35
CLU-213	ENST00000522502	KLHDC4	Q8TBB5	520 aa		12.85	□□□□□ -0.35
CLU-213	ENST00000522502	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.85	□□□□□ -0.35
CLU-213	ENST00000522502	SAGE1	Q9NXZ1	904 aa		12.85	□□□□□ -0.35
CLU-213	ENST00000522502	ECM29	Q5VYK3	1845 aa		12.85	□□□□□ -0.35
CLU-213	ENST00000522502	GRM8	O00222	908 aa		12.84	□□□□□ -0.35
CLU-213	ENST00000522502	GJA5	P36382	358 aa		12.84	□□□□□ -0.35
CLU-213	ENST00000522502	LRRC24	Q50LG9	513 aa		12.84	□□□□□ -0.35
CLU-213	ENST00000522502	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.84	□□□□□ -0.35
CLU-213	ENST00000522502	DEFB129	Q9H1M3	183 aa		12.84	□□□□□ -0.35
CLU-213	ENST00000522502	OTOF	Q9HC10	1997 aa		12.83	□□□□□ -0.35
CLU-213	ENST00000522502	IL1R1	P14778	569 aa		12.83	□□□□□ -0.36
CLU-213	ENST00000522502	DLGAP5	Q15398	846 aa		12.83	□□□□□ -0.36
CLU-213	ENST00000522502	LDHAL6A	Q6ZMR3	332 aa		12.83	□□□□□ -0.36
CLU-213	ENST00000522502	CNKSR2	Q8WXI2	1034 aa		12.83	□□□□□ -0.36
CLU-213	ENST00000522502	VEZT	Q9HBM0	779 aa		12.83	□□□□□ -0.36
CLU-213	ENST00000522502	PDE4DIP	Q5VU43	2346 aa		12.83	□□□□□ -0.36
CLU-213	ENST00000522502	FKBP1B	P68106	108 aa		12.82	□□□□□ -0.36
CLU-213	ENST00000522502	LDLRAD1	Q5T700	205 aa		12.82	□□□□□ -0.36
CLU-213	ENST00000522502	MRPL50	Q8N5N7	158 aa	Known RBP	12.82	□□□□□ -0.36
CLU-213	ENST00000522502	ANKRD44	Q8N8A2	993 aa		12.82	□□□□□ -0.36
CLU-213	ENST00000522502	FAM84B	Q96KN1	310 aa	Predicted RBP	12.82	□□□□□ -0.36
CLU-213	ENST00000522502	BICC1	Q9H694	974 aa	Known RBP	12.82	□□□□□ -0.36
CLU-213	ENST00000522502	CNNM1	Q9NRU3	951 aa		12.82	□□□□□ -0.36
CLU-213	ENST00000522502	C9orf78	Q9NZ63	289 aa	Predicted RBP	12.82	□□□□□ -0.36
CLU-213	ENST00000522502	HPS5	Q9UPZ3	1129 aa		12.82	□□□□□ -0.36
CLU-213	ENST00000522502	MYO3B	Q8WXR4	1341 aa		12.82	□□□□□ -0.36
CLU-213	ENST00000522502	ZNF521	Q96K83	1311 aa		12.82	□□□□□ -0.36
CLU-213	ENST00000522502	SPDYE2B	A6NHP3	402 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
CLU-213	ENST00000522502	SPDYE6	P0CI01	402 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	TM4SF4	P48230	202 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	RBM5	P52756	815 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
CLU-213	ENST00000522502	CACNB3	P54284	484 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	CCDC57	Q2TAC2	916 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	TAF7L	Q5H9L4	462 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	SPRYD7	Q5W111	196 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	C15orf52	Q6ZUT6	534 aa	Known RBP	12.81	□□□□□ -0.36
CLU-213	ENST00000522502	CTU1	Q7Z7A3	348 aa	Known RBP	12.81	□□□□□ -0.36
CLU-213	ENST00000522502	CDCA7L	Q96GN5	454 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	CHMP4A	Q9BY43	222 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	TDRD3	Q9H7E2	651 aa	Known RBP	12.81	□□□□□ -0.36
CLU-213	ENST00000522502	HDAC9	Q9UKV0	1011 aa		12.81	□□□□□ -0.36
CLU-213	ENST00000522502	GPR25	O00155	361 aa		12.8	□□□□□ -0.36
CLU-213	ENST00000522502	USP2	O75604	605 aa	Predicted RBP	12.8	□□□□□ -0.36
CLU-213	ENST00000522502	ZNF804A	Q7Z570	1209 aa		12.8	□□□□□ -0.36
CLU-213	ENST00000522502	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.8	□□□□□ -0.36
CLU-213	ENST00000522502	TDRD7	Q8NHU6	1098 aa	Known RBP	12.8	□□□□□ -0.36
CLU-213	ENST00000522502	SRCIN1	Q9C0H9	1055 aa		12.8	□□□□□ -0.36
CLU-213	ENST00000522502	RIPOR2	Q9Y4F9	1068 aa		12.8	□□□□□ -0.36
CLU-213	ENST00000522502	ZSWIM8	A7E2V4	1837 aa		12.79	□□□□□ -0.36
CLU-213	ENST00000522502	TCP10L2	B9ZVM9	353 aa		12.79	□□□□□ -0.36
CLU-213	ENST00000522502	CHAF1A	Q13111	956 aa	Predicted RBP	12.79	□□□□□ -0.36
CLU-213	ENST00000522502	RASA3	Q14644	834 aa		12.79	□□□□□ -0.36
CLU-213	ENST00000522502	NCBP3	Q53F19	620 aa	Known RBP	12.79	□□□□□ -0.36
CLU-213	ENST00000522502	MFSD14B	Q5SR56	506 aa		12.79	□□□□□ -0.36
CLU-213	ENST00000522502	ARMC9	Q7Z3E5	817 aa		12.79	□□□□□ -0.36
CLU-213	ENST00000522502	SSH1	Q8WYL5	1049 aa		12.79	□□□□□ -0.36
CLU-213	ENST00000522502	WNK4	Q96J92	1243 aa		12.79	□□□□□ -0.36
CLU-213	ENST00000522502	PTPN18	Q99952	460 aa		12.79	□□□□□ -0.36
CLU-213	ENST00000522502	ZNF70	Q9UC06	446 aa	Predicted RBP	12.79	□□□□□ -0.36
CLU-213	ENST00000522502	TTF2	Q9UNY4	1162 aa	Known RBP	12.79	□□□□□ -0.36
CLU-213	ENST00000522502	NF2	P35240	595 aa		12.78	□□□□□ -0.36
CLU-213	ENST00000522502	BCAM	P50895	628 aa		12.78	□□□□□ -0.36
CLU-213	ENST00000522502	MTMR14	Q8NCE2	650 aa		12.78	□□□□□ -0.36
CLU-213	ENST00000522502	SLC10A4	Q96EP9	437 aa		12.78	□□□□□ -0.36
CLU-213	ENST00000522502	TMEM39B	Q9GZU3	492 aa		12.78	□□□□□ -0.36
CLU-213	ENST00000522502	ELP3	Q9H9T3	547 aa		12.78	□□□□□ -0.36
CLU-213	ENST00000522502	ARAP2	Q8WZ64	1704 aa		12.77	□□□□□ -0.36
CLU-213	ENST00000522502	ALDH1L1	O75891	902 aa		12.77	□□□□□ -0.37
CLU-213	ENST00000522502	HIBADH	P31937	336 aa	Known RBP	12.77	□□□□□ -0.37
CLU-213	ENST00000522502	IFNL1	Q8IU54	200 aa		12.77	□□□□□ -0.37
CLU-213	ENST00000522502	TEPSIN	Q96N21	525 aa		12.77	□□□□□ -0.37
CLU-213	ENST00000522502	FAM205A	Q6ZU69	1335 aa		12.77	□□□□□ -0.37
CLU-213	ENST00000522502	ECM2	O94769	699 aa	Predicted RBP	12.76	□□□□□ -0.37
CLU-213	ENST00000522502	CRK	P46108	304 aa		12.76	□□□□□ -0.37
CLU-213	ENST00000522502	MAP3K11	Q16584	847 aa		12.76	□□□□□ -0.37
CLU-213	ENST00000522502	SPDYE2	Q495Y8	402 aa		12.76	□□□□□ -0.37
CLU-213	ENST00000522502	FBXO33	Q7Z6M2	555 aa		12.76	□□□□□ -0.37
CLU-213	ENST00000522502	DZIP1L	Q8IYY4	767 aa	Known RBP	12.76	□□□□□ -0.37
CLU-213	ENST00000522502	VGLL2	Q8N8G2	317 aa		12.76	□□□□□ -0.37
CLU-213	ENST00000522502	USP44	Q9H0E7	712 aa		12.76	□□□□□ -0.37
CLU-213	ENST00000522502	UTY	O14607	1347 aa		12.76	□□□□□ -0.37
CLU-213	ENST00000522502	COL1A1	P02452	1464 aa	Predicted RBP	12.75	□□□□□ -0.37
CLU-213	ENST00000522502	RFX5	P48382	616 aa	Predicted RBP	12.75	□□□□□ -0.37
CLU-213	ENST00000522502	UBE4A	Q14139	1066 aa		12.75	□□□□□ -0.37
CLU-213	ENST00000522502	RABL6	Q3YEC7	729 aa	Predicted RBP	12.75	□□□□□ -0.37
CLU-213	ENST00000522502	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	12.75	□□□□□ -0.37
CLU-213	ENST00000522502	LAMB1	P07942	1786 aa		12.74	□□□□□ -0.37
CLU-213	ENST00000522502	FKTN	O75072	461 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms