RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 UTYO14607 1347 aa24.83■■□□□ 1.56
PABPC1-215ENST00000520804 NBPF7P0C2Y1 421 aaPredicted RBP24.82■■□□□ 1.56
PABPC1-215ENST00000520804 FKBP1AP62942 108 aaKnown RBP24.82■■□□□ 1.56
PABPC1-215ENST00000520804 TTLL12Q14166 644 aaPredicted RBP24.82■■□□□ 1.56
PABPC1-215ENST00000520804 CCDC85CA6NKD9 419 aa24.81■■□□□ 1.56
PABPC1-215ENST00000520804 DGKZQ13574 1117 aa24.81■■□□□ 1.56
PABPC1-215ENST00000520804 DLGAP5Q15398 846 aa24.81■■□□□ 1.56
PABPC1-215ENST00000520804 MTMR14Q8NCE2 650 aa24.81■■□□□ 1.56
PABPC1-215ENST00000520804 E9PSI1 815 aa24.8■■□□□ 1.56
PABPC1-215ENST00000520804 COL1A1P02452 1464 aaPredicted RBP24.79■■□□□ 1.56
PABPC1-215ENST00000520804 UBE4AQ14139 1066 aa24.79■■□□□ 1.56
PABPC1-215ENST00000520804 PTPRCP08575 1304 aa24.79■■□□□ 1.56
PABPC1-215ENST00000520804 F8W031 263 aaPredicted RBP24.78■■□□□ 1.56
PABPC1-215ENST00000520804 RABL6Q3YEC7 729 aaPredicted RBP24.78■■□□□ 1.56
PABPC1-215ENST00000520804 PUS3Q9BZE2 481 aaKnown RBP24.78■■□□□ 1.56
PABPC1-215ENST00000520804 JAG2Q9Y219 1238 aa24.78■■□□□ 1.56
PABPC1-215ENST00000520804 ECM29Q5VYK3 1845 aa24.77■■□□□ 1.56
PABPC1-215ENST00000520804 CFAP100Q494V2 611 aa24.77■■□□□ 1.56
PABPC1-215ENST00000520804 ARMC9Q7Z3E5 817 aa24.77■■□□□ 1.56
PABPC1-215ENST00000520804 DEFB129Q9H1M3 183 aa24.77■■□□□ 1.56
PABPC1-215ENST00000520804 BICC1Q9H694 974 aaKnown RBP24.77■■□□□ 1.56
PABPC1-215ENST00000520804 RIPOR2Q9Y4F9 1068 aa24.77■■□□□ 1.56
PABPC1-215ENST00000520804 PCDHAC2Q9Y5I4 1007 aa24.77■■□□□ 1.56
PABPC1-215ENST00000520804 FAM205AQ6ZU69 1335 aa24.77■■□□□ 1.56
PABPC1-215ENST00000520804 SLFN5Q08AF3 891 aa24.76■■□□□ 1.55
PABPC1-215ENST00000520804 TDRD7Q8NHU6 1098 aaKnown RBP24.76■■□□□ 1.55
PABPC1-215ENST00000520804 SSH1Q8WYL5 1049 aa24.76■■□□□ 1.55
PABPC1-215ENST00000520804 SPDYE2BA6NHP3 402 aa24.75■■□□□ 1.55
PABPC1-215ENST00000520804 SPDYE6P0CI01 402 aa24.75■■□□□ 1.55
PABPC1-215ENST00000520804 GYG1P46976 350 aa24.75■■□□□ 1.55
PABPC1-215ENST00000520804 PTPN12Q05209 780 aaKnown RBP24.75■■□□□ 1.55
PABPC1-215ENST00000520804 PRKG1Q13976 671 aa24.75■■□□□ 1.55
PABPC1-215ENST00000520804 PRMT6Q96LA8 375 aaPredicted RBP24.75■■□□□ 1.55
PABPC1-215ENST00000520804 MROH5Q6ZUA9 1318 aa24.75■■□□□ 1.55
PABPC1-215ENST00000520804 MYO1BO43795 1136 aa24.74■■□□□ 1.55
PABPC1-215ENST00000520804 HIBADHP31937 336 aaKnown RBP24.74■■□□□ 1.55
PABPC1-215ENST00000520804 LDLRAD1Q5T700 205 aa24.74■■□□□ 1.55
PABPC1-215ENST00000520804 ANKRD44Q8N8A2 993 aa24.74■■□□□ 1.55
PABPC1-215ENST00000520804 FAM84BQ96KN1 310 aaPredicted RBP24.74■■□□□ 1.55
PABPC1-215ENST00000520804 PPP2R3BQ9Y5P8 575 aa24.74■■□□□ 1.55
PABPC1-215ENST00000520804 ANGEL1Q9UNK9 670 aaKnown RBP24.73■■□□□ 1.55
PABPC1-215ENST00000520804 CLRN2A0PK11 232 aa24.72■■□□□ 1.55
PABPC1-215ENST00000520804 TM4SF4P48230 202 aa24.72■■□□□ 1.55
PABPC1-215ENST00000520804 MFSD14BQ5SR56 506 aa24.72■■□□□ 1.55
PABPC1-215ENST00000520804 AOX1Q06278 1338 aa24.71■■□□□ 1.55
PABPC1-215ENST00000520804 RGS19P49795 217 aa24.71■■□□□ 1.55
PABPC1-215ENST00000520804 MKRN3Q13064 507 aaKnown RBP24.71■■□□□ 1.55
PABPC1-215ENST00000520804 LRRC24Q50LG9 513 aa24.71■■□□□ 1.55
PABPC1-215ENST00000520804 USP44Q9H0E7 712 aa24.71■■□□□ 1.55
PABPC1-215ENST00000520804 FZD1Q9UP38 647 aa24.71■■□□□ 1.55
PABPC1-215ENST00000520804 SSC5DA1L4H1 1573 aa24.71■■□□□ 1.55
PABPC1-215ENST00000520804 RBM5P52756 815 aaKnown RBP eCLIP24.7■■□□□ 1.54
PABPC1-215ENST00000520804 MAP3K11Q16584 847 aa24.7■■□□□ 1.54
PABPC1-215ENST00000520804 ALDH1L2Q3SY69 923 aa24.7■■□□□ 1.54
PABPC1-215ENST00000520804 CDCA7LQ96GN5 454 aa24.7■■□□□ 1.54
PABPC1-215ENST00000520804 VEZTQ9HBM0 779 aa24.7■■□□□ 1.54
PABPC1-215ENST00000520804 ARAP2Q8WZ64 1704 aa24.69■■□□□ 1.54
PABPC1-215ENST00000520804 METTL24Q5JXM2 366 aa24.69■■□□□ 1.54
PABPC1-215ENST00000520804 FBXO33Q7Z6M2 555 aa24.69■■□□□ 1.54
PABPC1-215ENST00000520804 SERPINA10Q9UK55 444 aa24.69■■□□□ 1.54
PABPC1-215ENST00000520804 TTF2Q9UNY4 1162 aaKnown RBP24.69■■□□□ 1.54
PABPC1-215ENST00000520804 PPP1R12BO60237 982 aaPredicted RBP24.68■■□□□ 1.54
PABPC1-215ENST00000520804 PDE8BO95263 885 aa24.68■■□□□ 1.54
PABPC1-215ENST00000520804 TBC1D8O95759 1140 aa24.68■■□□□ 1.54
PABPC1-215ENST00000520804 SREBF2Q12772 1141 aa24.68■■□□□ 1.54
PABPC1-215ENST00000520804 SUPT20HL1Q3ZLR7 823 aa24.68■■□□□ 1.54
PABPC1-215ENST00000520804 SPRYD7Q5W111 196 aa24.68■■□□□ 1.54
PABPC1-215ENST00000520804 VGLL2Q8N8G2 317 aa24.68■■□□□ 1.54
PABPC1-215ENST00000520804 CTU1Q7Z7A3 348 aaKnown RBP24.67■■□□□ 1.54
PABPC1-215ENST00000520804 VPS37DQ86XT2 251 aa24.67■■□□□ 1.54
PABPC1-215ENST00000520804 TRMT2AQ8IZ69 625 aaKnown RBP24.67■■□□□ 1.54
PABPC1-215ENST00000520804 KLHDC4Q8TBB5 520 aa24.67■■□□□ 1.54
PABPC1-215ENST00000520804 MLLT1Q03111 559 aaPredicted RBP24.66■■□□□ 1.54
PABPC1-215ENST00000520804 RASA3Q14644 834 aa24.66■■□□□ 1.54
PABPC1-215ENST00000520804 SPDYE2Q495Y8 402 aa24.66■■□□□ 1.54
PABPC1-215ENST00000520804 NBPF12Q5TAG4 269 aaPredicted RBP24.66■■□□□ 1.54
PABPC1-215ENST00000520804 SLC10A4Q96EP9 437 aa24.66■■□□□ 1.54
PABPC1-215ENST00000520804 SMC4Q9NTJ3 1288 aa24.66■■□□□ 1.54
PABPC1-215ENST00000520804 UNCXA6NJT0 531 aa24.65■■□□□ 1.54
PABPC1-215ENST00000520804 CAVIN4Q5BKX8 364 aa24.65■■□□□ 1.54
PABPC1-215ENST00000520804 ZNF70Q9UC06 446 aaPredicted RBP24.65■■□□□ 1.54
PABPC1-215ENST00000520804 TNFAIP1Q13829 316 aa24.64■■□□□ 1.54
PABPC1-215ENST00000520804 NOM1Q5C9Z4 860 aaKnown RBP24.64■■□□□ 1.54
PABPC1-215ENST00000520804 ZNF296Q8WUU4 475 aaPredicted RBP24.64■■□□□ 1.54
PABPC1-215ENST00000520804 CLMNQ96JQ2 1002 aa24.64■■□□□ 1.54
PABPC1-215ENST00000520804 TDRD3Q9H7E2 651 aaKnown RBP24.64■■□□□ 1.54
PABPC1-215ENST00000520804 IQSEC3Q9UPP2 1182 aaPredicted RBP24.64■■□□□ 1.54
PABPC1-215ENST00000520804 CRKP46108 304 aa24.63■■□□□ 1.53
PABPC1-215ENST00000520804 CHAF1AQ13111 956 aaPredicted RBP24.63■■□□□ 1.53
PABPC1-215ENST00000520804 GRIK5Q16478 980 aa24.63■■□□□ 1.53
PABPC1-215ENST00000520804 DZIP1LQ8IYY4 767 aaKnown RBP24.63■■□□□ 1.53
PABPC1-215ENST00000520804 TBC1D22AQ8WUA7 517 aa24.63■■□□□ 1.53
PABPC1-215ENST00000520804 CFHR5Q9BXR6 569 aa24.63■■□□□ 1.53
PABPC1-215ENST00000520804 MANSC4A6NHS7 340 aaPredicted RBP24.62■■□□□ 1.53
PABPC1-215ENST00000520804 GPR25O00155 361 aa24.62■■□□□ 1.53
PABPC1-215ENST00000520804 FRAT2O75474 233 aaPredicted RBP24.62■■□□□ 1.53
PABPC1-215ENST00000520804 ZBTB48P10074 688 aaPredicted RBP24.62■■□□□ 1.53
PABPC1-215ENST00000520804 RFX5P48382 616 aaPredicted RBP24.62■■□□□ 1.53
PABPC1-215ENST00000520804 WNK4Q96J92 1243 aa24.62■■□□□ 1.53
PABPC1-215ENST00000520804 KIF16BQ96L93 1317 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms