RNA–Protein interactions for RNA: ENST00000518560.1

TTC1-202, Transcript of tetratricopeptide repeat domain 1, humanhuman

TSL 5

Gene TTC1, Length 543 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-202ENST00000518560 SHTN1A0MZ66 631 aa12.41□□□□□ -0.42
TTC1-202ENST00000518560 YDJCA8MPS7 323 aa12.41□□□□□ -0.42
TTC1-202ENST00000518560 GPSM2P81274 684 aa12.41□□□□□ -0.42
TTC1-202ENST00000518560 CXCL9Q07325 125 aa12.41□□□□□ -0.42
TTC1-202ENST00000518560 TWISTNBQ3B726 338 aaPredicted RBP12.41□□□□□ -0.42
TTC1-202ENST00000518560 GRIPAP1Q4V328 841 aa12.41□□□□□ -0.42
TTC1-202ENST00000518560 METTL22Q9BUU2 404 aaPredicted RBP12.41□□□□□ -0.42
TTC1-202ENST00000518560 TMX4Q9H1E5 349 aaPredicted RBP12.41□□□□□ -0.42
TTC1-202ENST00000518560 PSME4Q14997 1843 aa12.4□□□□□ -0.42
TTC1-202ENST00000518560 PI4KAP2A4QPH2 592 aa12.4□□□□□ -0.42
TTC1-202ENST00000518560 RAD17O75943 681 aa12.4□□□□□ -0.42
TTC1-202ENST00000518560 IGKV5-2P06315 115 aa12.4□□□□□ -0.42
TTC1-202ENST00000518560 LMOD1P29536 600 aaPredicted RBP12.4□□□□□ -0.42
TTC1-202ENST00000518560 KIAA2012Q0VF49 1180 aa12.4□□□□□ -0.42
TTC1-202ENST00000518560 TRIM28Q13263 835 aaKnown RBP12.4□□□□□ -0.42
TTC1-202ENST00000518560 CWF19L2Q2TBE0 894 aaKnown RBP12.4□□□□□ -0.42
TTC1-202ENST00000518560 PI4KAP1Q8N8J0 262 aa12.4□□□□□ -0.42
TTC1-202ENST00000518560 ZBTB38Q8NAP3 1195 aaPredicted RBP12.4□□□□□ -0.42
TTC1-202ENST00000518560 SUPT20HQ8NEM7 779 aa12.4□□□□□ -0.42
TTC1-202ENST00000518560 FAM198AQ9UFP1 575 aa12.4□□□□□ -0.42
TTC1-202ENST00000518560 ZNRF3Q9ULT6 936 aa12.4□□□□□ -0.42
TTC1-202ENST00000518560 PCCAP05165 728 aaPredicted RBP12.39□□□□□ -0.43
TTC1-202ENST00000518560 GMPSP49915 693 aaPredicted RBP12.39□□□□□ -0.43
TTC1-202ENST00000518560 FAM9BQ8IZU0 186 aa12.39□□□□□ -0.43
TTC1-202ENST00000518560 CCDC191Q8NCU4 936 aa12.39□□□□□ -0.43
TTC1-202ENST00000518560 ZNF775Q96BV0 537 aaPredicted RBP12.39□□□□□ -0.43
TTC1-202ENST00000518560 DBNDD1Q9H9R9 158 aa12.39□□□□□ -0.43
TTC1-202ENST00000518560 CWC25Q9NXE8 425 aaPredicted RBP12.39□□□□□ -0.43
TTC1-202ENST00000518560 POLLQ9UGP5 575 aa12.39□□□□□ -0.43
TTC1-202ENST00000518560 NSFL1CQ9UNZ2 370 aaKnown RBP12.39□□□□□ -0.43
TTC1-202ENST00000518560 ZNF646O15015 1829 aaPredicted RBP12.39□□□□□ -0.43
TTC1-202ENST00000518560 IL16Q14005 1332 aa12.38□□□□□ -0.43
TTC1-202ENST00000518560 A0A1B0GUL6 1792 aa12.38□□□□□ -0.43
TTC1-202ENST00000518560 DDX58O95786 925 aaKnown RBP12.38□□□□□ -0.43
TTC1-202ENST00000518560 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
TTC1-202ENST00000518560 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
TTC1-202ENST00000518560 CIAPIN1Q6FI81 312 aa12.38□□□□□ -0.43
TTC1-202ENST00000518560 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
TTC1-202ENST00000518560 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
TTC1-202ENST00000518560 CNTROBQ8N137 903 aa12.38□□□□□ -0.43
TTC1-202ENST00000518560 NKX2-3Q8TAU0 364 aa12.38□□□□□ -0.43
TTC1-202ENST00000518560 STK31Q9BXU1 1019 aa12.38□□□□□ -0.43
TTC1-202ENST00000518560 GPRC5DQ9NZD1 345 aa12.38□□□□□ -0.43
TTC1-202ENST00000518560 POLR2AP24928 1970 aaKnown RBP12.38□□□□□ -0.43
TTC1-202ENST00000518560 C6orf229H3BNL8 230 aa12.37□□□□□ -0.43
TTC1-202ENST00000518560 TRAF5O00463 557 aa12.37□□□□□ -0.43
TTC1-202ENST00000518560 PDE8AO60658 829 aa12.37□□□□□ -0.43
TTC1-202ENST00000518560 EXOSC9Q06265 439 aaKnown RBP12.37□□□□□ -0.43
TTC1-202ENST00000518560 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
TTC1-202ENST00000518560 TMUB1Q9BVT8 246 aa12.37□□□□□ -0.43
TTC1-202ENST00000518560 KCNQ5Q9NR82 932 aa12.37□□□□□ -0.43
TTC1-202ENST00000518560 CNTNAP1P78357 1384 aa12.37□□□□□ -0.43
TTC1-202ENST00000518560 RTL9Q8NET4 1388 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 WTIPA6NIX2 430 aaPredicted RBP12.36□□□□□ -0.43
TTC1-202ENST00000518560 TMEM88BA6NKF7 163 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 NEURL1BA8MQ27 555 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 RPS8P62241 208 aaKnown RBP12.36□□□□□ -0.43
TTC1-202ENST00000518560 FLIIQ13045 1269 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 WASHC4Q2M389 1173 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 COL13A1Q5TAT6 717 aaPredicted RBP12.36□□□□□ -0.43
TTC1-202ENST00000518560 TMC4Q7Z404 712 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 TBC1D16Q8TBP0 767 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 TRPM4Q8TD43 1214 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 VPS33BQ9H267 617 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 CDHR2Q9BYE9 1310 aa12.36□□□□□ -0.43
TTC1-202ENST00000518560 PSMD14O00487 310 aa12.35□□□□□ -0.43
TTC1-202ENST00000518560 ECE2O60344 883 aa12.35□□□□□ -0.43
TTC1-202ENST00000518560 VAMP4O75379 141 aa12.35□□□□□ -0.43
TTC1-202ENST00000518560 UFL1O94874 794 aa12.35□□□□□ -0.43
TTC1-202ENST00000518560 SLC4A3P48751 1232 aa12.35□□□□□ -0.43
TTC1-202ENST00000518560 CTSWP56202 376 aa12.35□□□□□ -0.43
TTC1-202ENST00000518560 COPS2P61201 443 aa12.35□□□□□ -0.43
TTC1-202ENST00000518560 UBE3BQ7Z3V4 1068 aa12.35□□□□□ -0.43
TTC1-202ENST00000518560 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
TTC1-202ENST00000518560 THSD7BQ9C0I4 1608 aa12.34□□□□□ -0.43
TTC1-202ENST00000518560 GRXCR2A6NFK2 248 aa12.34□□□□□ -0.43
TTC1-202ENST00000518560 C3orf80F5H4A9 247 aa12.34□□□□□ -0.43
TTC1-202ENST00000518560 EGFRP00533 1210 aa12.34□□□□□ -0.43
TTC1-202ENST00000518560 VEGFBP49765 207 aa12.34□□□□□ -0.43
TTC1-202ENST00000518560 HIRAP54198 1017 aaPredicted RBP12.34□□□□□ -0.43
TTC1-202ENST00000518560 FKBP5Q13451 457 aaPredicted RBP12.34□□□□□ -0.43
TTC1-202ENST00000518560 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
TTC1-202ENST00000518560 DLK2Q6UY11 383 aa12.34□□□□□ -0.43
TTC1-202ENST00000518560 USP50Q70EL3 339 aaPredicted RBP12.34□□□□□ -0.43
TTC1-202ENST00000518560 GLIS2Q9BZE0 524 aaPredicted RBP12.34□□□□□ -0.43
TTC1-202ENST00000518560 GREM2Q9H772 168 aa12.34□□□□□ -0.43
TTC1-202ENST00000518560 ADARB2Q9NS39 739 aaKnown RBP12.34□□□□□ -0.43
TTC1-202ENST00000518560 F6X3S4 739 aa12.33□□□□□ -0.44
TTC1-202ENST00000518560 NEXNQ0ZGT2 675 aa12.33□□□□□ -0.44
TTC1-202ENST00000518560 TNIP1Q15025 636 aa12.33□□□□□ -0.44
TTC1-202ENST00000518560 ANKRD18AQ8IVF6 992 aa12.33□□□□□ -0.44
TTC1-202ENST00000518560 WDR63Q8IWG1 891 aa12.33□□□□□ -0.44
TTC1-202ENST00000518560 SLF2Q8IX21 1173 aa12.33□□□□□ -0.44
TTC1-202ENST00000518560 TTLL11Q8NHH1 800 aa12.33□□□□□ -0.44
TTC1-202ENST00000518560 ANKIB1Q9P2G1 1089 aa12.33□□□□□ -0.44
TTC1-202ENST00000518560 ABT1Q9ULW3 272 aaKnown RBP12.33□□□□□ -0.44
TTC1-202ENST00000518560 DNAAF4Q8WXU2 420 aa12.32□□□□□ -0.44
TTC1-202ENST00000518560 PODXL2Q9NZ53 605 aa12.32□□□□□ -0.44
TTC1-202ENST00000518560 CNOT7Q9UIV1 285 aaKnown RBP12.32□□□□□ -0.44
TTC1-202ENST00000518560 GGA1Q9UJY5 639 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms