RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 GRAPQ13588 217 aa10.33□□□□□ -0.76
CLDND1-229ENST00000513988 GRAPLQ8TC17 118 aaPredicted RBP10.33□□□□□ -0.76
CLDND1-229ENST00000513988 ADAMTS19Q8TE59 1207 aa10.33□□□□□ -0.76
CLDND1-229ENST00000513988 UHRF1Q96T88 793 aaPredicted RBP10.33□□□□□ -0.76
CLDND1-229ENST00000513988 SEMA6BQ9H3T3 888 aa10.33□□□□□ -0.76
CLDND1-229ENST00000513988 SRRDQ9UH36 339 aa10.33□□□□□ -0.76
CLDND1-229ENST00000513988 COL2A1P02458 1487 aaPredicted RBP10.33□□□□□ -0.76
CLDND1-229ENST00000513988 ERVV-1B6SEH8 477 aa10.32□□□□□ -0.76
CLDND1-229ENST00000513988 PPP1R12BO60237 982 aaPredicted RBP10.32□□□□□ -0.76
CLDND1-229ENST00000513988 MRE11P49959 708 aa10.32□□□□□ -0.76
CLDND1-229ENST00000513988 MAP3K11Q16584 847 aa10.32□□□□□ -0.76
CLDND1-229ENST00000513988 PPP1R42Q7Z4L9 355 aa10.32□□□□□ -0.76
CLDND1-229ENST00000513988 APOBEC3FQ8IUX4 373 aaKnown RBP10.32□□□□□ -0.76
CLDND1-229ENST00000513988 POLLQ9UGP5 575 aa10.32□□□□□ -0.76
CLDND1-229ENST00000513988 LRRC37AA6NMS7 1700 aa10.31□□□□□ -0.76
CLDND1-229ENST00000513988 UNCXA6NJT0 531 aa10.31□□□□□ -0.76
CLDND1-229ENST00000513988 KCNQ3O43525 872 aa10.31□□□□□ -0.76
CLDND1-229ENST00000513988 SNRPA1P09661 255 aaKnown RBP10.31□□□□□ -0.76
CLDND1-229ENST00000513988 NGEFQ8N5V2 710 aa10.31□□□□□ -0.76
CLDND1-229ENST00000513988 GMLQ99445 158 aa10.31□□□□□ -0.76
CLDND1-229ENST00000513988 LRFN3Q9BTN0 628 aa10.31□□□□□ -0.76
CLDND1-229ENST00000513988 ZC3H12CQ9C0D7 883 aaKnown RBP10.31□□□□□ -0.76
CLDND1-229ENST00000513988 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
CLDND1-229ENST00000513988 MAP3K15Q6ZN16 1313 aa10.31□□□□□ -0.76
CLDND1-229ENST00000513988 CDH23Q9H251 3354 aa10.31□□□□□ -0.76
CLDND1-229ENST00000513988 BTBD11A6QL63 1104 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 TLR2O60603 784 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 NEUROD1Q13562 356 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 CDCA8Q53HL2 280 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 SLC10A5Q5PT55 438 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 KIF6Q6ZMV9 814 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 IL27Q8NEV9 243 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 DIS3LQ8TF46 1054 aaKnown RBP10.3□□□□□ -0.76
CLDND1-229ENST00000513988 BRI3BPQ8WY22 251 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 DEFB118Q96PH6 123 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 MYPNQ86TC9 1320 aa10.3□□□□□ -0.76
CLDND1-229ENST00000513988 CCL15-CCL14A0A0B4J2E2 113 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 WNT10BO00744 389 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 OSBPP22059 807 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 IL13P35225 146 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 PSMC4P43686 418 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 CCL15Q16663 113 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 OGFOD1Q8N543 542 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 USP38Q8NB14 1042 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 SLAIN1Q8ND83 568 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 IL17REQ8NFR9 667 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 ATXN2LQ8WWM7 1075 aaKnown RBP10.29□□□□□ -0.76
CLDND1-229ENST00000513988 MS4A4AQ96JQ5 239 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 SIN3AQ96ST3 1273 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 ANKRD36CQ5JPF3 1778 aa10.29□□□□□ -0.76
CLDND1-229ENST00000513988 SASH1O94885 1247 aa10.28□□□□□ -0.76
CLDND1-229ENST00000513988 FMNL1O95466 1100 aaPredicted RBP10.28□□□□□ -0.76
CLDND1-229ENST00000513988 HMOX1P09601 288 aa10.28□□□□□ -0.76
CLDND1-229ENST00000513988 IREB2P48200 963 aaKnown RBP10.28□□□□□ -0.76
CLDND1-229ENST00000513988 GPSM2P81274 684 aa10.28□□□□□ -0.76
CLDND1-229ENST00000513988 MDM2Q00987 491 aaPredicted RBP10.28□□□□□ -0.76
CLDND1-229ENST00000513988 PARP10Q53GL7 1025 aa10.28□□□□□ -0.76
CLDND1-229ENST00000513988 ZNF34Q8IZ26 560 aa10.28□□□□□ -0.76
CLDND1-229ENST00000513988 FAM43AQ8N2R8 423 aa10.28□□□□□ -0.76
CLDND1-229ENST00000513988 HELBQ8NG08 1087 aaPredicted RBP10.28□□□□□ -0.76
CLDND1-229ENST00000513988 OPTNQ96CV9 577 aa10.28□□□□□ -0.76
CLDND1-229ENST00000513988 ASB2Q96Q27 587 aa10.28□□□□□ -0.76
CLDND1-229ENST00000513988 UTP14AQ9BVJ6 771 aaKnown RBP10.28□□□□□ -0.76
CLDND1-229ENST00000513988 LAMB2P55268 1798 aa10.28□□□□□ -0.76
CLDND1-229ENST00000513988 GTF2A2P52657 109 aa10.27□□□□□ -0.77
CLDND1-229ENST00000513988 ANKRD13AQ8IZ07 590 aa10.27□□□□□ -0.77
CLDND1-229ENST00000513988 TBC1D16Q8TBP0 767 aa10.27□□□□□ -0.77
CLDND1-229ENST00000513988 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
CLDND1-229ENST00000513988 ZBTB3Q9H5J0 574 aa10.27□□□□□ -0.77
CLDND1-229ENST00000513988 COL1A1P02452 1464 aaPredicted RBP10.27□□□□□ -0.77
CLDND1-229ENST00000513988 PSME4Q14997 1843 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 USP17L3A6NCW0 530 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 USP17L4A6NCW7 530 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 GNAT3A8MTJ3 354 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 HCLS1P14317 486 aaPredicted RBP10.26□□□□□ -0.77
CLDND1-229ENST00000513988 CTGFP29279 349 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 GSE1Q14687 1217 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 TMEM31Q5JXX7 168 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 TTLL7Q6ZT98 887 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 USP17L1Q7RTZ2 530 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 SPOCK2Q92563 424 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 NBPF3Q9H094 633 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 DEFB129Q9H1M3 183 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 TTYH1Q9H313 450 aaPredicted RBP10.26□□□□□ -0.77
CLDND1-229ENST00000513988 ELP3Q9H9T3 547 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 THEGQ9P2T0 379 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 CACNA1GO43497 2377 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 ADGRA2Q96PE1 1338 aa10.26□□□□□ -0.77
CLDND1-229ENST00000513988 SEC24BO95487 1268 aa10.25□□□□□ -0.77
CLDND1-229ENST00000513988 INHAP05111 366 aa10.25□□□□□ -0.77
CLDND1-229ENST00000513988 MRPS5P82675 430 aaKnown RBP10.25□□□□□ -0.77
CLDND1-229ENST00000513988 PRKCZQ05513 592 aa10.25□□□□□ -0.77
CLDND1-229ENST00000513988 SUPT20HL1Q3ZLR7 823 aa10.25□□□□□ -0.77
CLDND1-229ENST00000513988 ANKLE1Q8NAG6 615 aa10.25□□□□□ -0.77
CLDND1-229ENST00000513988 LBHD1Q9BQE6 289 aaPredicted RBP10.24□□□□□ -0.77
CLDND1-229ENST00000513988 C11orf49Q9H6J7 331 aa10.24□□□□□ -0.77
CLDND1-229ENST00000513988 PAK6Q9NQU5 681 aaPredicted RBP10.24□□□□□ -0.77
CLDND1-229ENST00000513988 ADCY3O60266 1144 aa10.23□□□□□ -0.77
CLDND1-229ENST00000513988 UFL1O94874 794 aa10.23□□□□□ -0.77
CLDND1-229ENST00000513988 GIGYF2Q6Y7W6 1299 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms