RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 RGL4Q8IZJ4 473 aa6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 FOXD4L4Q8WXT5 416 aaPredicted RBP6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 CARMIL1Q5VZK9 1371 aa6.44□□□□□ -1.38
PDLIM5-218ENST00000513341 KIF21BO75037 1637 aa6.43□□□□□ -1.38
PDLIM5-218ENST00000513341 SART1O43290 800 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-218ENST00000513341 PREPP48147 710 aa6.43□□□□□ -1.38
PDLIM5-218ENST00000513341 HYAL2Q12891 473 aa6.43□□□□□ -1.38
PDLIM5-218ENST00000513341 RNF208Q9H0X6 261 aa6.43□□□□□ -1.38
PDLIM5-218ENST00000513341 LEMD3Q9Y2U8 911 aa6.43□□□□□ -1.38
PDLIM5-218ENST00000513341 DISP1Q96F81 1524 aa6.43□□□□□ -1.38
PDLIM5-218ENST00000513341 IQGAP2Q13576 1575 aa6.43□□□□□ -1.38
PDLIM5-218ENST00000513341 MEGF11A6BM72 1044 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 FAM196BA6NMK8 535 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 ADAM11O75078 769 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 KIF4AO95239 1232 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 DPYDQ12882 1025 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 FAM9AQ8IZU1 332 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 SPACA7Q96KW9 195 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 ADAM19Q9H013 955 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 KCNF1Q9H3M0 494 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 OSGEPQ9NPF4 335 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 SEC31BQ9NQW1 1179 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 ATG3Q9NT62 314 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 LRFN2Q9ULH4 789 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 USP20Q9Y2K6 914 aa6.42□□□□□ -1.38
PDLIM5-218ENST00000513341 RAD21O60216 631 aa6.41□□□□□ -1.38
PDLIM5-218ENST00000513341 FBLN7Q53RD9 439 aa6.41□□□□□ -1.38
PDLIM5-218ENST00000513341 CEP135Q66GS9 1140 aa6.41□□□□□ -1.38
PDLIM5-218ENST00000513341 VTI1AQ96AJ9 217 aa6.41□□□□□ -1.38
PDLIM5-218ENST00000513341 POM121Q96HA1 1249 aa6.41□□□□□ -1.38
PDLIM5-218ENST00000513341 METTL22Q9BUU2 404 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-218ENST00000513341 MAFBQ9Y5Q3 323 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-218ENST00000513341 BCORL1Q5H9F3 1711 aa6.4□□□□□ -1.38
PDLIM5-218ENST00000513341 PIP4K2BP78356 416 aa6.4□□□□□ -1.38
PDLIM5-218ENST00000513341 CRTC2Q53ET0 693 aaPredicted RBP6.4□□□□□ -1.38
PDLIM5-218ENST00000513341 ANKMY2Q8IV38 441 aa6.4□□□□□ -1.38
PDLIM5-218ENST00000513341 AGBL5Q8NDL9 886 aa6.4□□□□□ -1.38
PDLIM5-218ENST00000513341 UBASH3BQ8TF42 649 aa6.4□□□□□ -1.38
PDLIM5-218ENST00000513341 KLHDC7BQ96G42 594 aa6.4□□□□□ -1.38
PDLIM5-218ENST00000513341 MFSD14AQ96MC6 490 aa6.4□□□□□ -1.38
PDLIM5-218ENST00000513341 CARD10Q9BWT7 1032 aa6.4□□□□□ -1.38
PDLIM5-218ENST00000513341 ARID4BQ4LE39 1312 aaPredicted RBP6.4□□□□□ -1.39
PDLIM5-218ENST00000513341 UGGT2Q9NYU1 1516 aa6.4□□□□□ -1.39
PDLIM5-218ENST00000513341 F13BP05160 661 aa6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 PTPRAP18433 802 aa6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 MAP4P27816 1152 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 HSPA2P54652 639 aa6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 ATP11AP98196 1134 aa6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 COL19A1Q14993 1142 aa6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 TRIP4Q15650 581 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 COL13A1Q5TAT6 717 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 TXNDC11Q6PKC3 985 aa6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 PBX4Q9BYU1 374 aa6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 LACRTQ9GZZ8 138 aa6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 BSDC1Q9NW68 430 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-218ENST00000513341 DBX1A6NMT0 343 aa6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 DDX3YO15523 660 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 RAPGEF3O95398 923 aa6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 EPHA1P21709 976 aa6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 KANK4Q5T7N3 995 aaPredicted RBP6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 FDX2Q6P4F2 183 aa6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 ADAMTSL4Q6UY14 1074 aa6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 OSBPL1AQ9BXW6 950 aa6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 KRTAP17-1Q9BYP8 105 aa6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 FAM13BQ9NYF5 915 aa6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 TFIP11Q9UBB9 837 aaKnown RBP6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 NEO1Q92859 1461 aa6.38□□□□□ -1.39
PDLIM5-218ENST00000513341 MADDQ8WXG6 1647 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 POGZQ7Z3K3 1410 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L15C9J2P7 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L10C9JJH3 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L13C9JLJ4 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L12C9JPN9 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L11C9JVI0 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L21D6R901 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L18D6R9N7 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L22D6RA61 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L17D6RBQ6 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L19D6RCP7 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L20D6RJB6 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 H3BRJ5 948 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 USP17L24Q0WX57 530 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 SPOCD1Q6ZMY3 1216 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 TP53INP2Q8IXH6 220 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 COL26A1Q96A83 441 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 ARXQ96QS3 562 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 RUSC1Q9BVN2 902 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 RASSF4Q9H2L5 321 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 SUGCTQ9HAC7 445 aa6.37□□□□□ -1.39
PDLIM5-218ENST00000513341 SPATA31D1Q6ZQQ2 1576 aa6.36□□□□□ -1.39
PDLIM5-218ENST00000513341 YEATS2Q9ULM3 1422 aa6.36□□□□□ -1.39
PDLIM5-218ENST00000513341 FAM177BA6PVY3 158 aa6.36□□□□□ -1.39
PDLIM5-218ENST00000513341 COX20Q5RI15 118 aa6.36□□□□□ -1.39
PDLIM5-218ENST00000513341 CEP120Q8N960 986 aa6.36□□□□□ -1.39
PDLIM5-218ENST00000513341 KIAA0556O60303 1618 aa6.36□□□□□ -1.39
PDLIM5-218ENST00000513341 GOLGA3Q08378 1498 aa6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 SUPT5HO00267 1087 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 GAS2O43903 313 aaKnown RBP6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 LGR5O75473 907 aa6.35□□□□□ -1.39
PDLIM5-218ENST00000513341 BRD2P25440 801 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms