RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 CNNM1Q9NRU3 951 aa14.61□□□□□ -0.07
HMGCS1-204ENST00000507293 COL1A1P02452 1464 aaPredicted RBP14.61□□□□□ -0.07
HMGCS1-204ENST00000507293 IL1R1P14778 569 aa14.6□□□□□ -0.07
HMGCS1-204ENST00000507293 DLGAP5Q15398 846 aa14.6□□□□□ -0.07
HMGCS1-204ENST00000507293 REM2Q8IYK8 340 aaPredicted RBP14.6□□□□□ -0.07
HMGCS1-204ENST00000507293 JAG2Q9Y219 1238 aa14.6□□□□□ -0.07
HMGCS1-204ENST00000507293 F8W031 263 aaPredicted RBP14.59□□□□□ -0.07
HMGCS1-204ENST00000507293 PRKG1Q13976 671 aa14.59□□□□□ -0.07
HMGCS1-204ENST00000507293 KAZALD1Q96I82 304 aa14.59□□□□□ -0.07
HMGCS1-204ENST00000507293 PCDHAC2Q9Y5I4 1007 aa14.59□□□□□ -0.07
HMGCS1-204ENST00000507293 LAMB1P07942 1786 aa14.59□□□□□ -0.07
HMGCS1-204ENST00000507293 NBPF7P0C2Y1 421 aaPredicted RBP14.58□□□□□ -0.08
HMGCS1-204ENST00000507293 FKBP1AP62942 108 aaKnown RBP14.58□□□□□ -0.08
HMGCS1-204ENST00000507293 ARMC9Q7Z3E5 817 aa14.58□□□□□ -0.08
HMGCS1-204ENST00000507293 MRPL50Q8N5N7 158 aaKnown RBP14.58□□□□□ -0.08
HMGCS1-204ENST00000507293 SSC5DA1L4H1 1573 aa14.57□□□□□ -0.08
HMGCS1-204ENST00000507293 OTOFQ9HC10 1997 aa14.57□□□□□ -0.08
HMGCS1-204ENST00000507293 PTPN12Q05209 780 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-204ENST00000507293 MKRN3Q13064 507 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-204ENST00000507293 CFAP100Q494V2 611 aa14.57□□□□□ -0.08
HMGCS1-204ENST00000507293 MTMR14Q8NCE2 650 aa14.57□□□□□ -0.08
HMGCS1-204ENST00000507293 PUS3Q9BZE2 481 aaKnown RBP14.57□□□□□ -0.08
HMGCS1-204ENST00000507293 UTYO14607 1347 aa14.57□□□□□ -0.08
HMGCS1-204ENST00000507293 MYH13Q9UKX3 1938 aa14.56□□□□□ -0.08
HMGCS1-204ENST00000507293 CLRN2A0PK11 232 aa14.56□□□□□ -0.08
HMGCS1-204ENST00000507293 GYG1P46976 350 aa14.56□□□□□ -0.08
HMGCS1-204ENST00000507293 UBE4AQ14139 1066 aa14.56□□□□□ -0.08
HMGCS1-204ENST00000507293 DEFB129Q9H1M3 183 aa14.56□□□□□ -0.08
HMGCS1-204ENST00000507293 BICC1Q9H694 974 aaKnown RBP14.56□□□□□ -0.08
HMGCS1-204ENST00000507293 ANGEL1Q9UNK9 670 aaKnown RBP14.56□□□□□ -0.08
HMGCS1-204ENST00000507293 FZD1Q9UP38 647 aa14.56□□□□□ -0.08
HMGCS1-204ENST00000507293 AOX1Q06278 1338 aa14.56□□□□□ -0.08
HMGCS1-204ENST00000507293 SPDYE2BA6NHP3 402 aa14.55□□□□□ -0.08
HMGCS1-204ENST00000507293 MYO1BO43795 1136 aa14.55□□□□□ -0.08
HMGCS1-204ENST00000507293 SPDYE6P0CI01 402 aa14.55□□□□□ -0.08
HMGCS1-204ENST00000507293 RGS19P49795 217 aa14.55□□□□□ -0.08
HMGCS1-204ENST00000507293 RABL6Q3YEC7 729 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-204ENST00000507293 TDRD7Q8NHU6 1098 aaKnown RBP14.55□□□□□ -0.08
HMGCS1-204ENST00000507293 PRMT6Q96LA8 375 aaPredicted RBP14.55□□□□□ -0.08
HMGCS1-204ENST00000507293 PTPRCP08575 1304 aa14.55□□□□□ -0.08
HMGCS1-204ENST00000507293 FAM205AQ6ZU69 1335 aa14.55□□□□□ -0.08
HMGCS1-204ENST00000507293 E9PSI1 815 aa14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 TBC1D8O95759 1140 aa14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 HIBADHP31937 336 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 RBM5P52756 815 aaKnown RBP eCLIP14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 MLLT1Q03111 559 aaPredicted RBP14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 LDLRAD1Q5T700 205 aa14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 CTU1Q7Z7A3 348 aaKnown RBP14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 ANKRD44Q8N8A2 993 aa14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 VEZTQ9HBM0 779 aa14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 RIPOR2Q9Y4F9 1068 aa14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 PPP2R3BQ9Y5P8 575 aa14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 MROH5Q6ZUA9 1318 aa14.54□□□□□ -0.08
HMGCS1-204ENST00000507293 TM4SF4P48230 202 aa14.53□□□□□ -0.08
HMGCS1-204ENST00000507293 SREBF2Q12772 1141 aa14.53□□□□□ -0.08
HMGCS1-204ENST00000507293 MFSD14BQ5SR56 506 aa14.53□□□□□ -0.08
HMGCS1-204ENST00000507293 SSH1Q8WYL5 1049 aa14.53□□□□□ -0.08
HMGCS1-204ENST00000507293 FAM84BQ96KN1 310 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-204ENST00000507293 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.53□□□□□ -0.08
HMGCS1-204ENST00000507293 SLFN5Q08AF3 891 aa14.52□□□□□ -0.09
HMGCS1-204ENST00000507293 MAP3K11Q16584 847 aa14.52□□□□□ -0.09
HMGCS1-204ENST00000507293 LRRC24Q50LG9 513 aa14.52□□□□□ -0.09
HMGCS1-204ENST00000507293 METTL24Q5JXM2 366 aa14.52□□□□□ -0.09
HMGCS1-204ENST00000507293 SPRYD7Q5W111 196 aa14.52□□□□□ -0.09
HMGCS1-204ENST00000507293 CLMNQ96JQ2 1002 aa14.52□□□□□ -0.09
HMGCS1-204ENST00000507293 TTF2Q9UNY4 1162 aaKnown RBP14.52□□□□□ -0.09
HMGCS1-204ENST00000507293 PPP1R12BO60237 982 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-204ENST00000507293 RASA3Q14644 834 aa14.51□□□□□ -0.09
HMGCS1-204ENST00000507293 SUPT20HL1Q3ZLR7 823 aa14.51□□□□□ -0.09
HMGCS1-204ENST00000507293 NBPF12Q5TAG4 269 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-204ENST00000507293 KLHDC4Q8TBB5 520 aa14.51□□□□□ -0.09
HMGCS1-204ENST00000507293 ZNF296Q8WUU4 475 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-204ENST00000507293 IQSEC3Q9UPP2 1182 aaPredicted RBP14.51□□□□□ -0.09
HMGCS1-204ENST00000507293 GPR25O00155 361 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 CHAF1AQ13111 956 aaPredicted RBP14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 SPDYE2Q495Y8 402 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 FBXO33Q7Z6M2 555 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 VPS37DQ86XT2 251 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 VGLL2Q8N8G2 317 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 SLC10A4Q96EP9 437 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 CDCA7LQ96GN5 454 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 WNK4Q96J92 1243 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 USP44Q9H0E7 712 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 TDRD3Q9H7E2 651 aaKnown RBP14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 ZNF70Q9UC06 446 aaPredicted RBP14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 SERPINA10Q9UK55 444 aa14.5□□□□□ -0.09
HMGCS1-204ENST00000507293 PDE8BO95263 885 aa14.49□□□□□ -0.09
HMGCS1-204ENST00000507293 CRKP46108 304 aa14.49□□□□□ -0.09
HMGCS1-204ENST00000507293 SOX10P56693 466 aa14.49□□□□□ -0.09
HMGCS1-204ENST00000507293 TNFAIP1Q13829 316 aa14.49□□□□□ -0.09
HMGCS1-204ENST00000507293 GRIK5Q16478 980 aa14.49□□□□□ -0.09
HMGCS1-204ENST00000507293 CAVIN4Q5BKX8 364 aa14.49□□□□□ -0.09
HMGCS1-204ENST00000507293 SMC4Q9NTJ3 1288 aa14.49□□□□□ -0.09
HMGCS1-204ENST00000507293 MANSC4A6NHS7 340 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-204ENST00000507293 FRAT2O75474 233 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-204ENST00000507293 ZBTB48P10074 688 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-204ENST00000507293 IREB2P48200 963 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-204ENST00000507293 ALDH1L2Q3SY69 923 aa14.48□□□□□ -0.09
HMGCS1-204ENST00000507293 NOM1Q5C9Z4 860 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-204ENST00000507293 DZIP1LQ8IYY4 767 aaKnown RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms