RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 ZFATQ9P243 1243 aa11.65□□□□□ -0.54
PFDN1-202ENST00000507185 USP20Q9Y2K6 914 aa11.65□□□□□ -0.54
PFDN1-202ENST00000507185 POLR1AO95602 1720 aaPredicted RBP11.65□□□□□ -0.54
PFDN1-202ENST00000507185 CEP162Q5TB80 1403 aa11.64□□□□□ -0.55
PFDN1-202ENST00000507185 RARAP10276 462 aa11.64□□□□□ -0.55
PFDN1-202ENST00000507185 C16orf46Q6P387 395 aa11.64□□□□□ -0.55
PFDN1-202ENST00000507185 FAM35AQ86V20 835 aa11.64□□□□□ -0.55
PFDN1-202ENST00000507185 RGL4Q8IZJ4 473 aa11.64□□□□□ -0.55
PFDN1-202ENST00000507185 CMTR1Q8N1G2 835 aaKnown RBP11.64□□□□□ -0.55
PFDN1-202ENST00000507185 CXXC1Q9P0U4 656 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-202ENST00000507185 RGS17Q9UGC6 210 aaPredicted RBP11.64□□□□□ -0.55
PFDN1-202ENST00000507185 EID1Q9Y6B2 187 aa11.64□□□□□ -0.55
PFDN1-202ENST00000507185 MED14O60244 1454 aa11.63□□□□□ -0.55
PFDN1-202ENST00000507185 K7ELQ4 463 aaPredicted RBP11.63□□□□□ -0.55
PFDN1-202ENST00000507185 RGS9O75916 674 aaPredicted RBP11.63□□□□□ -0.55
PFDN1-202ENST00000507185 FURINP09958 794 aa11.63□□□□□ -0.55
PFDN1-202ENST00000507185 DHX32Q7L7V1 743 aaKnown RBP11.63□□□□□ -0.55
PFDN1-202ENST00000507185 COL26A1Q96A83 441 aa11.63□□□□□ -0.55
PFDN1-202ENST00000507185 MKNK1Q9BUB5 465 aa11.63□□□□□ -0.55
PFDN1-202ENST00000507185 SAP130Q9H0E3 1048 aa11.63□□□□□ -0.55
PFDN1-202ENST00000507185 NAGPAQ9UK23 515 aa11.63□□□□□ -0.55
PFDN1-202ENST00000507185 NCOA2Q15596 1464 aa11.63□□□□□ -0.55
PFDN1-202ENST00000507185 ZBTB7CA1YPR0 619 aa11.62□□□□□ -0.55
PFDN1-202ENST00000507185 CPB1P15086 417 aa11.62□□□□□ -0.55
PFDN1-202ENST00000507185 BRD2P25440 801 aaKnown RBP11.62□□□□□ -0.55
PFDN1-202ENST00000507185 ARID4AP29374 1257 aaPredicted RBP11.62□□□□□ -0.55
PFDN1-202ENST00000507185 ALKQ9UM73 1620 aa11.61□□□□□ -0.55
PFDN1-202ENST00000507185 PTCD1O75127 700 aaKnown RBP11.61□□□□□ -0.55
PFDN1-202ENST00000507185 XYLBO75191 536 aa11.61□□□□□ -0.55
PFDN1-202ENST00000507185 LTKP29376 864 aa11.61□□□□□ -0.55
PFDN1-202ENST00000507185 GATA4P43694 442 aa11.61□□□□□ -0.55
PFDN1-202ENST00000507185 CLP1Q92989 425 aaKnown RBP11.61□□□□□ -0.55
PFDN1-202ENST00000507185 NACC1Q96RE7 527 aa11.61□□□□□ -0.55
PFDN1-202ENST00000507185 SCAF11Q99590 1463 aaKnown RBP11.61□□□□□ -0.55
PFDN1-202ENST00000507185 IQGAP1P46940 1657 aa11.61□□□□□ -0.55
PFDN1-202ENST00000507185 RNF17Q9BXT8 1623 aaKnown RBP11.6□□□□□ -0.55
PFDN1-202ENST00000507185 ERVK-7P63135 1459 aa11.6□□□□□ -0.55
PFDN1-202ENST00000507185 LOC100996750A0A140TA64 210 aa11.6□□□□□ -0.55
PFDN1-202ENST00000507185 EGFRP00533 1210 aa11.6□□□□□ -0.55
PFDN1-202ENST00000507185 AFF1P51825 1210 aaKnown RBP11.6□□□□□ -0.55
PFDN1-202ENST00000507185 NAA30Q147X3 362 aaPredicted RBP11.6□□□□□ -0.55
PFDN1-202ENST00000507185 TRPM4Q8TD43 1214 aa11.6□□□□□ -0.55
PFDN1-202ENST00000507185 KRTAP4-6Q9BYQ5 205 aa11.6□□□□□ -0.55
PFDN1-202ENST00000507185 MLLT1Q03111 559 aaPredicted RBP11.59□□□□□ -0.55
PFDN1-202ENST00000507185 CAPN12Q6ZSI9 719 aa11.59□□□□□ -0.55
PFDN1-202ENST00000507185 ETFBKMTQ8IXQ9 262 aa11.59□□□□□ -0.55
PFDN1-202ENST00000507185 DEPDC5O75140 1603 aa11.59□□□□□ -0.55
PFDN1-202ENST00000507185 ABCC3O15438 1527 aa11.59□□□□□ -0.55
PFDN1-202ENST00000507185 TMEM94Q12767 1356 aa11.58□□□□□ -0.56
PFDN1-202ENST00000507185 ZBTB42B2RXF5 422 aa11.58□□□□□ -0.56
PFDN1-202ENST00000507185 RAC1P63000 192 aa11.58□□□□□ -0.56
PFDN1-202ENST00000507185 GPLD1P80108 840 aa11.58□□□□□ -0.56
PFDN1-202ENST00000507185 GRIK4Q16099 956 aa11.58□□□□□ -0.56
PFDN1-202ENST00000507185 ELMSAN1Q6PJG2 1045 aa11.58□□□□□ -0.56
PFDN1-202ENST00000507185 A0A0A0MRY4 1105 aa11.57□□□□□ -0.56
PFDN1-202ENST00000507185 DOC2BQ14184 412 aa11.57□□□□□ -0.56
PFDN1-202ENST00000507185 MEX3CQ5U5Q3 659 aaKnown RBP11.57□□□□□ -0.56
PFDN1-202ENST00000507185 SLC26A8Q96RN1 970 aa11.57□□□□□ -0.56
PFDN1-202ENST00000507185 TLR7Q9NYK1 1049 aaKnown RBP11.57□□□□□ -0.56
PFDN1-202ENST00000507185 FRRS1LQ9P0K9 344 aa11.57□□□□□ -0.56
PFDN1-202ENST00000507185 SYNMO15061 1565 aa11.57□□□□□ -0.56
PFDN1-202ENST00000507185 PERM1Q5SV97 790 aa11.56□□□□□ -0.56
PFDN1-202ENST00000507185 DMRTC2Q8IXT2 367 aaPredicted RBP11.56□□□□□ -0.56
PFDN1-202ENST00000507185 LPIN3Q9BQK8 851 aa11.56□□□□□ -0.56
PFDN1-202ENST00000507185 RRP7BPQ9NSQ0 103 aa11.56□□□□□ -0.56
PFDN1-202ENST00000507185 KCNMB2Q9Y691 235 aa11.56□□□□□ -0.56
PFDN1-202ENST00000507185 ELNP15502 786 aa11.55□□□□□ -0.56
PFDN1-202ENST00000507185 NRLP54845 237 aa11.55□□□□□ -0.56
PFDN1-202ENST00000507185 HFE2Q6ZVN8 426 aa11.55□□□□□ -0.56
PFDN1-202ENST00000507185 FAM13BQ9NYF5 915 aa11.55□□□□□ -0.56
PFDN1-202ENST00000507185 TNFRSF10BO14763 440 aa11.54□□□□□ -0.56
PFDN1-202ENST00000507185 PSAPP07602 524 aa11.54□□□□□ -0.56
PFDN1-202ENST00000507185 ATP2B4P23634 1241 aa11.54□□□□□ -0.56
PFDN1-202ENST00000507185 PIK3R5Q8WYR1 880 aa11.54□□□□□ -0.56
PFDN1-202ENST00000507185 CCDC9Q9Y3X0 531 aaKnown RBP11.54□□□□□ -0.56
PFDN1-202ENST00000507185 FAM135BQ49AJ0 1406 aa11.53□□□□□ -0.56
PFDN1-202ENST00000507185 C9orf172C9J069 976 aa11.53□□□□□ -0.56
PFDN1-202ENST00000507185 EIF2AK2P19525 551 aaKnown RBP11.53□□□□□ -0.56
PFDN1-202ENST00000507185 PLAURQ03405 335 aa11.53□□□□□ -0.56
PFDN1-202ENST00000507185 FAM26DQ5JW98 314 aa11.53□□□□□ -0.56
PFDN1-202ENST00000507185 MSL1Q68DK7 614 aa11.53□□□□□ -0.56
PFDN1-202ENST00000507185 STIM2Q9P246 746 aa11.53□□□□□ -0.56
PFDN1-202ENST00000507185 KANK1Q14678 1352 aa11.53□□□□□ -0.56
PFDN1-202ENST00000507185 TMEM2Q9UHN6 1383 aa11.53□□□□□ -0.56
PFDN1-202ENST00000507185 STRCP1A6NGW2 1772 aa11.52□□□□□ -0.57
PFDN1-202ENST00000507185 MMP20O60882 483 aa11.52□□□□□ -0.57
PFDN1-202ENST00000507185 PPP1R15AO75807 674 aaPredicted RBP11.52□□□□□ -0.57
PFDN1-202ENST00000507185 KCNA6P17658 529 aa11.52□□□□□ -0.57
PFDN1-202ENST00000507185 SMG9Q9H0W8 520 aaKnown RBP11.52□□□□□ -0.57
PFDN1-202ENST00000507185 MSH6P52701 1360 aa11.52□□□□□ -0.57
PFDN1-202ENST00000507185 KIF15Q9NS87 1388 aa11.52□□□□□ -0.57
PFDN1-202ENST00000507185 ARHGEF5Q12774 1597 aa11.51□□□□□ -0.57
PFDN1-202ENST00000507185 NLRP13Q86W25 1043 aa11.51□□□□□ -0.57
PFDN1-202ENST00000507185 TTC9Q92623 222 aa11.51□□□□□ -0.57
PFDN1-202ENST00000507185 SLAIN2Q9P270 581 aa11.51□□□□□ -0.57
PFDN1-202ENST00000507185 LOC102724428A0A0B4J2F2 783 aa11.5□□□□□ -0.57
PFDN1-202ENST00000507185 ZAP70P43403 619 aa11.5□□□□□ -0.57
PFDN1-202ENST00000507185 SIK1P57059 783 aa11.5□□□□□ -0.57
PFDN1-202ENST00000507185 TRIP4Q15650 581 aaPredicted RBP11.5□□□□□ -0.57
PFDN1-202ENST00000507185 GRIK5Q16478 980 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms