RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 KIF23Q02241 960 aaPredicted RBP18.11■□□□□ 0.49
HMGCS1-203ENST00000507004 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
HMGCS1-203ENST00000507004 ARMC9Q7Z3E5 817 aa18.11■□□□□ 0.49
HMGCS1-203ENST00000507004 TRMT2AQ8IZ69 625 aaKnown RBP18.11■□□□□ 0.49
HMGCS1-203ENST00000507004 KAZALD1Q96I82 304 aa18.11■□□□□ 0.49
HMGCS1-203ENST00000507004 BICC1Q9H694 974 aaKnown RBP18.11■□□□□ 0.49
HMGCS1-203ENST00000507004 SMC4Q9NTJ3 1288 aa18.11■□□□□ 0.49
HMGCS1-203ENST00000507004 ZNF646O15015 1829 aaPredicted RBP18.1■□□□□ 0.49
HMGCS1-203ENST00000507004 TDRD7Q8NHU6 1098 aaKnown RBP18.1■□□□□ 0.49
HMGCS1-203ENST00000507004 RIPOR2Q9Y4F9 1068 aa18.1■□□□□ 0.49
HMGCS1-203ENST00000507004 A0A1B0GUL6 1792 aa18.09■□□□□ 0.49
HMGCS1-203ENST00000507004 UNCXA6NJT0 531 aa18.09■□□□□ 0.49
HMGCS1-203ENST00000507004 TTLL12Q14166 644 aaPredicted RBP18.09■□□□□ 0.49
HMGCS1-203ENST00000507004 CAVIN4Q5BKX8 364 aa18.09■□□□□ 0.49
HMGCS1-203ENST00000507004 VPS37DQ86XT2 251 aa18.09■□□□□ 0.49
HMGCS1-203ENST00000507004 API5Q9BZZ5 524 aaKnown RBP18.09■□□□□ 0.49
HMGCS1-203ENST00000507004 FBXO3Q9UK99 471 aa18.09■□□□□ 0.49
HMGCS1-203ENST00000507004 KIF16BQ96L93 1317 aa18.08■□□□□ 0.49
HMGCS1-203ENST00000507004 SNAP23O00161 211 aa18.08■□□□□ 0.48
HMGCS1-203ENST00000507004 METTL24Q5JXM2 366 aa18.08■□□□□ 0.48
HMGCS1-203ENST00000507004 RASAL3Q86YV0 1011 aa18.08■□□□□ 0.48
HMGCS1-203ENST00000507004 TBC1D22AQ8WUA7 517 aa18.08■□□□□ 0.48
HMGCS1-203ENST00000507004 USP44Q9H0E7 712 aa18.08■□□□□ 0.48
HMGCS1-203ENST00000507004 PDE8BO95263 885 aa18.07■□□□□ 0.48
HMGCS1-203ENST00000507004 TNFAIP1Q13829 316 aa18.07■□□□□ 0.48
HMGCS1-203ENST00000507004 SUPT20HL1Q3ZLR7 823 aa18.07■□□□□ 0.48
HMGCS1-203ENST00000507004 CFAP100Q494V2 611 aa18.07■□□□□ 0.48
HMGCS1-203ENST00000507004 CERS5Q8N5B7 392 aa18.07■□□□□ 0.48
HMGCS1-203ENST00000507004 ANKRD44Q8N8A2 993 aa18.07■□□□□ 0.48
HMGCS1-203ENST00000507004 ABHD8Q96I13 439 aa18.07■□□□□ 0.48
HMGCS1-203ENST00000507004 FAM84BQ96KN1 310 aaPredicted RBP18.07■□□□□ 0.48
HMGCS1-203ENST00000507004 SERPINA10Q9UK55 444 aa18.07■□□□□ 0.48
HMGCS1-203ENST00000507004 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
HMGCS1-203ENST00000507004 PPP1R12BO60237 982 aaPredicted RBP18.06■□□□□ 0.48
HMGCS1-203ENST00000507004 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
HMGCS1-203ENST00000507004 MFSD14BQ5SR56 506 aa18.06■□□□□ 0.48
HMGCS1-203ENST00000507004 CDCA7LQ96GN5 454 aa18.06■□□□□ 0.48
HMGCS1-203ENST00000507004 CSRNP1Q96S65 589 aa18.06■□□□□ 0.48
HMGCS1-203ENST00000507004 PUS3Q9BZE2 481 aaKnown RBP18.06■□□□□ 0.48
HMGCS1-203ENST00000507004 DEFB129Q9H1M3 183 aa18.06■□□□□ 0.48
HMGCS1-203ENST00000507004 IFIT1P09914 478 aaKnown RBP18.05■□□□□ 0.48
HMGCS1-203ENST00000507004 UBTFL1P0CB47 393 aaPredicted RBP18.05■□□□□ 0.48
HMGCS1-203ENST00000507004 HDLBPQ00341 1268 aaKnown RBP18.05■□□□□ 0.48
HMGCS1-203ENST00000507004 FBXO33Q7Z6M2 555 aa18.05■□□□□ 0.48
HMGCS1-203ENST00000507004 ZIC5Q96T25 663 aa18.05■□□□□ 0.48
HMGCS1-203ENST00000507004 RNF186Q9NXI6 227 aa18.05■□□□□ 0.48
HMGCS1-203ENST00000507004 TSKSQ9UJT2 592 aa18.05■□□□□ 0.48
HMGCS1-203ENST00000507004 SUGT1Q9Y2Z0 365 aa18.05■□□□□ 0.48
HMGCS1-203ENST00000507004 AKAP11Q9UKA4 1901 aa18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 F8W031 263 aaPredicted RBP18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 UBE2Q2LH0YL09 131 aa18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 FRAT2O75474 233 aaPredicted RBP18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 GYG1P46976 350 aa18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 RBM5P52756 815 aaKnown RBP eCLIP18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 SREBF2Q12772 1141 aa18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 PUM3Q15397 648 aaKnown RBP18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 MAP3K11Q16584 847 aa18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 TTF2Q9UNY4 1162 aaKnown RBP18.04■□□□□ 0.48
HMGCS1-203ENST00000507004 EYA2O00167 538 aa18.03■□□□□ 0.48
HMGCS1-203ENST00000507004 LDLRAD1Q5T700 205 aa18.03■□□□□ 0.48
HMGCS1-203ENST00000507004 VGLL2Q8N8G2 317 aa18.03■□□□□ 0.48
HMGCS1-203ENST00000507004 MRIQ9BWK5 157 aa18.03■□□□□ 0.48
HMGCS1-203ENST00000507004 ECM29Q5VYK3 1845 aa18.02■□□□□ 0.48
HMGCS1-203ENST00000507004 MAST3O60307 1309 aa18.02■□□□□ 0.48
HMGCS1-203ENST00000507004 TRPA1O75762 1119 aa18.02■□□□□ 0.48
HMGCS1-203ENST00000507004 TNNI2P48788 182 aa18.02■□□□□ 0.48
HMGCS1-203ENST00000507004 INHBEP58166 350 aa18.02■□□□□ 0.48
HMGCS1-203ENST00000507004 LRRC24Q50LG9 513 aa18.02■□□□□ 0.48
HMGCS1-203ENST00000507004 PRAMEF18Q5VWM3 479 aa18.02■□□□□ 0.48
HMGCS1-203ENST00000507004 PRMT6Q96LA8 375 aaPredicted RBP18.02■□□□□ 0.48
HMGCS1-203ENST00000507004 ANGEL1Q9UNK9 670 aaKnown RBP18.02■□□□□ 0.48
HMGCS1-203ENST00000507004 IPO8O15397 1037 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 CIAO1O76071 339 aa18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 ALDH1A1P00352 501 aa18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 SLC5A1P13866 664 aa18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 TM4SF4P48230 202 aa18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 NOM1Q5C9Z4 860 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 LPIN2Q92539 896 aa18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 VEZTQ9HBM0 779 aa18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 NOB1Q9ULX3 412 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 SCAF8Q9UPN6 1271 aaKnown RBP18.01■□□□□ 0.47
HMGCS1-203ENST00000507004 IREB2P48200 963 aaKnown RBP18■□□□□ 0.47
HMGCS1-203ENST00000507004 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
HMGCS1-203ENST00000507004 MOB2Q70IA6 237 aa18■□□□□ 0.47
HMGCS1-203ENST00000507004 CASP8AP2Q9UKL3 1982 aa18■□□□□ 0.47
HMGCS1-203ENST00000507004 CLRN2A0PK11 232 aa17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 ZBTB48P10074 688 aaPredicted RBP17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 FGFR2P21802 821 aa17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 RFX5P48382 616 aaPredicted RBP17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 RARSP54136 660 aaKnown RBP17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 PTPN12Q05209 780 aaKnown RBP17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 DGKZQ13574 1117 aa17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 SLC10A4Q96EP9 437 aa17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 MCOLN1Q9GZU1 580 aa17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 JAG2Q9Y219 1238 aa17.99■□□□□ 0.47
HMGCS1-203ENST00000507004 MANSC4A6NHS7 340 aaPredicted RBP17.98■□□□□ 0.47
HMGCS1-203ENST00000507004 ZBTB22O15209 634 aa17.98■□□□□ 0.47
HMGCS1-203ENST00000507004 GNAI3P08754 354 aa17.98■□□□□ 0.47
HMGCS1-203ENST00000507004 CRKP46108 304 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms