RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-222	ENST00000506018	PAPPA2	Q9BXP8	1791 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	AOC2	O75106	756 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	KLRK1	P26718	216 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	ZNF157	P51786	506 aa	Predicted RBP	13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	KIAA0825	Q8IV33	1275 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	CDCA7L	Q96GN5	454 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	BICC1	Q9H694	974 aa	Known RBP	13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	WNT10B	O00744	389 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	MYO1B	O43795	1136 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	HSPA8	P11142	646 aa	Known RBP	13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	IL1R1	P14778	569 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	FKBP1A	P62942	108 aa	Known RBP	13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	RABL6	Q3YEC7	729 aa	Predicted RBP	13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	VPS37D	Q86XT2	251 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	MXD3	Q9BW11	206 aa		13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	API5	Q9BZZ5	524 aa	Known RBP	13.07	□□□□□ -0.32
NR1I3-222	ENST00000506018	ASTN2	O75129	1339 aa	Predicted RBP	13.06	□□□□□ -0.32
NR1I3-222	ENST00000506018	MKRN4P	Q13434	485 aa	Predicted RBP	13.06	□□□□□ -0.32
NR1I3-222	ENST00000506018	DLGAP5	Q15398	846 aa		13.06	□□□□□ -0.32
NR1I3-222	ENST00000506018	NBPF9	Q3BBW0	867 aa		13.06	□□□□□ -0.32
NR1I3-222	ENST00000506018	TRMT2A	Q8IZ69	625 aa	Known RBP	13.06	□□□□□ -0.32
NR1I3-222	ENST00000506018	SNAP23	O00161	211 aa		13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	SASH1	O94885	1247 aa		13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	HIBADH	P31937	336 aa	Known RBP	13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	TTLL12	Q14166	644 aa	Predicted RBP	13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	CAVIN4	Q5BKX8	364 aa		13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	METTL24	Q5JXM2	366 aa		13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	DLK2	Q6UY11	383 aa		13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	REM2	Q8IYK8	340 aa	Predicted RBP	13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	KAZALD1	Q96I82	304 aa		13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	USP44	Q9H0E7	712 aa		13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	KIF16B	Q96L93	1317 aa		13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	IRS2	Q9Y4H2	1338 aa		13.05	□□□□□ -0.32
NR1I3-222	ENST00000506018	MYH13	Q9UKX3	1938 aa		13.04	□□□□□ -0.32
NR1I3-222	ENST00000506018	ARAP2	Q8WZ64	1704 aa		13.04	□□□□□ -0.32
NR1I3-222	ENST00000506018	COL1A1	P02452	1464 aa	Predicted RBP	13.04	□□□□□ -0.32
NR1I3-222	ENST00000506018	FRAT2	O75474	233 aa	Predicted RBP	13.04	□□□□□ -0.32
NR1I3-222	ENST00000506018	UBTFL1	P0CB47	393 aa	Predicted RBP	13.04	□□□□□ -0.32
NR1I3-222	ENST00000506018	RIPOR2	Q9Y4F9	1068 aa		13.04	□□□□□ -0.32
NR1I3-222	ENST00000506018	RBM5	P52756	815 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
NR1I3-222	ENST00000506018	ARMC9	Q7Z3E5	817 aa		13.03	□□□□□ -0.32
NR1I3-222	ENST00000506018	ANKRD44	Q8N8A2	993 aa		13.03	□□□□□ -0.32
NR1I3-222	ENST00000506018	MTMR14	Q8NCE2	650 aa		13.03	□□□□□ -0.32
NR1I3-222	ENST00000506018	PUS3	Q9BZE2	481 aa	Known RBP	13.03	□□□□□ -0.32
NR1I3-222	ENST00000506018	NOB1	Q9ULX3	412 aa	Known RBP	13.03	□□□□□ -0.32
NR1I3-222	ENST00000506018		F8W031	263 aa	Predicted RBP	13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	IPO8	O15397	1037 aa	Known RBP	13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	PDE8B	O95263	885 aa		13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	SLC10A3	P09131	477 aa		13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	IFIT1	P09914	478 aa	Known RBP	13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	GYG1	P46976	350 aa		13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	MFSD14B	Q5SR56	506 aa		13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	TDRD7	Q8NHU6	1098 aa	Known RBP	13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	TBC1D22A	Q8WUA7	517 aa		13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	PPP2R3B	Q9Y5P8	575 aa		13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	FAM205A	Q6ZU69	1335 aa		13.02	□□□□□ -0.33
NR1I3-222	ENST00000506018	CASP8AP2	Q9UKL3	1982 aa		13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	FAM155A	B1AL88	458 aa	Predicted RBP	13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	KIF23	Q02241	960 aa	Predicted RBP	13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	PUM3	Q15397	648 aa	Known RBP	13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	CFAP100	Q494V2	611 aa		13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	LRRC24	Q50LG9	513 aa		13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	CERS5	Q8N5B7	392 aa		13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	ARHGAP45	Q92619	1136 aa		13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	ZBED3	Q96IU2	234 aa	Predicted RBP	13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	FAM84B	Q96KN1	310 aa	Predicted RBP	13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	SAGE1	Q9NXZ1	904 aa		13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	FBXO3	Q9UK99	471 aa		13.01	□□□□□ -0.33
NR1I3-222	ENST00000506018	RARS	P54136	660 aa	Known RBP	13	□□□□□ -0.33
NR1I3-222	ENST00000506018	TNFAIP1	Q13829	316 aa		13	□□□□□ -0.33
NR1I3-222	ENST00000506018	VEZT	Q9HBM0	779 aa		13	□□□□□ -0.33
NR1I3-222	ENST00000506018	SERPINA10	Q9UK55	444 aa		13	□□□□□ -0.33
NR1I3-222	ENST00000506018	TTF2	Q9UNY4	1162 aa	Known RBP	13	□□□□□ -0.33
NR1I3-222	ENST00000506018	SCAF8	Q9UPN6	1271 aa	Known RBP	13	□□□□□ -0.33
NR1I3-222	ENST00000506018	JAG2	Q9Y219	1238 aa		13	□□□□□ -0.33
NR1I3-222	ENST00000506018	SPDYE2B	A6NHP3	402 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	EYA2	O00167	538 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	PPP1R12B	O60237	982 aa	Predicted RBP	12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	SPDYE6	P0CI01	402 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	SLC5A1	P13866	664 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	SUPT20HL1	Q3ZLR7	823 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	PRAMEF18	Q5VWM3	479 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	FBXO33	Q7Z6M2	555 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	RASAL3	Q86YV0	1011 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	DEFB129	Q9H1M3	183 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	TSKS	Q9UJT2	592 aa		12.99	□□□□□ -0.33
NR1I3-222	ENST00000506018	MAST3	O60307	1309 aa		12.98	□□□□□ -0.33
NR1I3-222	ENST00000506018	UBE2Q2L	H0YL09	131 aa		12.98	□□□□□ -0.33
NR1I3-222	ENST00000506018	GNAI3	P08754	354 aa		12.98	□□□□□ -0.33
NR1I3-222	ENST00000506018	KLHDC4	Q8TBB5	520 aa		12.98	□□□□□ -0.33
NR1I3-222	ENST00000506018	LPIN2	Q92539	896 aa		12.98	□□□□□ -0.33
NR1I3-222	ENST00000506018	CIAO1	O76071	339 aa		12.97	□□□□□ -0.33
NR1I3-222	ENST00000506018	TNNI2	P48788	182 aa		12.97	□□□□□ -0.33
NR1I3-222	ENST00000506018	PTPN12	Q05209	780 aa	Known RBP	12.97	□□□□□ -0.33
NR1I3-222	ENST00000506018	CHAF1A	Q13111	956 aa	Predicted RBP	12.97	□□□□□ -0.33
NR1I3-222	ENST00000506018	VGLL2	Q8N8G2	317 aa		12.97	□□□□□ -0.33
NR1I3-222	ENST00000506018	PRMT6	Q96LA8	375 aa	Predicted RBP	12.97	□□□□□ -0.33
NR1I3-222	ENST00000506018	ZIC5	Q96T25	663 aa		12.97	□□□□□ -0.33
NR1I3-222	ENST00000506018	GNL3L	Q9NVN8	582 aa	Known RBP	12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms