RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 MROH5Q6ZUA9 1318 aa24.42■■□□□ 1.5
UBE2D3-215ENST00000503418 FAM155AB1AL88 458 aaPredicted RBP24.42■■□□□ 1.5
UBE2D3-215ENST00000503418 CT47B1P0C2W7 299 aaPredicted RBP24.42■■□□□ 1.5
UBE2D3-215ENST00000503418 CA12O43570 354 aa24.41■■□□□ 1.5
UBE2D3-215ENST00000503418 GYG1P46976 350 aa24.41■■□□□ 1.5
UBE2D3-215ENST00000503418 DLGAP5Q15398 846 aa24.41■■□□□ 1.5
UBE2D3-215ENST00000503418 LRRC24Q50LG9 513 aa24.41■■□□□ 1.5
UBE2D3-215ENST00000503418 METTL24Q5JXM2 366 aa24.41■■□□□ 1.5
UBE2D3-215ENST00000503418 KLHDC4Q8TBB5 520 aa24.41■■□□□ 1.5
UBE2D3-215ENST00000503418 HIBADHP31937 336 aaKnown RBP24.4■■□□□ 1.5
UBE2D3-215ENST00000503418 FKBP1BP68106 108 aa24.4■■□□□ 1.5
UBE2D3-215ENST00000503418 TTLL12Q14166 644 aaPredicted RBP24.4■■□□□ 1.5
UBE2D3-215ENST00000503418 MOB2Q70IA6 237 aa24.4■■□□□ 1.5
UBE2D3-215ENST00000503418 APOBEC3FQ8IUX4 373 aaKnown RBP24.4■■□□□ 1.5
UBE2D3-215ENST00000503418 NOB1Q9ULX3 412 aaKnown RBP24.4■■□□□ 1.5
UBE2D3-215ENST00000503418 ECM29Q5VYK3 1845 aa24.4■■□□□ 1.5
UBE2D3-215ENST00000503418 SLC10A3P09131 477 aa24.39■■□□□ 1.49
UBE2D3-215ENST00000503418 NF2P35240 595 aa24.39■■□□□ 1.49
UBE2D3-215ENST00000503418 FKBP1AP62942 108 aaKnown RBP24.39■■□□□ 1.49
UBE2D3-215ENST00000503418 ZBED3Q96IU2 234 aaPredicted RBP24.39■■□□□ 1.49
UBE2D3-215ENST00000503418 KIF23Q02241 960 aaPredicted RBP24.38■■□□□ 1.49
UBE2D3-215ENST00000503418 FAM84BQ96KN1 310 aaPredicted RBP24.38■■□□□ 1.49
UBE2D3-215ENST00000503418 UBE2Q2LH0YL09 131 aa24.37■■□□□ 1.49
UBE2D3-215ENST00000503418 CFAP100Q494V2 611 aa24.37■■□□□ 1.49
UBE2D3-215ENST00000503418 VPS37DQ86XT2 251 aa24.37■■□□□ 1.49
UBE2D3-215ENST00000503418 RASAL3Q86YV0 1011 aa24.37■■□□□ 1.49
UBE2D3-215ENST00000503418 TDRD7Q8NHU6 1098 aaKnown RBP24.37■■□□□ 1.49
UBE2D3-215ENST00000503418 PCDHAC2Q9Y5I4 1007 aa24.37■■□□□ 1.49
UBE2D3-215ENST00000503418 FAM205AQ6ZU69 1335 aa24.36■■□□□ 1.49
UBE2D3-215ENST00000503418 ARAP2Q8WZ64 1704 aa24.36■■□□□ 1.49
UBE2D3-215ENST00000503418 AKAP11Q9UKA4 1901 aa24.36■■□□□ 1.49
UBE2D3-215ENST00000503418 RBM5P52756 815 aaKnown RBP eCLIP24.36■■□□□ 1.49
UBE2D3-215ENST00000503418 MFSD14BQ5SR56 506 aa24.36■■□□□ 1.49
UBE2D3-215ENST00000503418 MTMR14Q8NCE2 650 aa24.36■■□□□ 1.49
UBE2D3-215ENST00000503418 API5Q9BZZ5 524 aaKnown RBP24.36■■□□□ 1.49
UBE2D3-215ENST00000503418 CASP8AP2Q9UKL3 1982 aa24.36■■□□□ 1.49
UBE2D3-215ENST00000503418 MYO1BO43795 1136 aa24.35■■□□□ 1.49
UBE2D3-215ENST00000503418 UBTFL1P0CB47 393 aaPredicted RBP24.35■■□□□ 1.49
UBE2D3-215ENST00000503418 IQSEC3Q9UPP2 1182 aaPredicted RBP24.35■■□□□ 1.49
UBE2D3-215ENST00000503418 CLRN2A0PK11 232 aa24.34■■□□□ 1.49
UBE2D3-215ENST00000503418 SPDYE2BA6NHP3 402 aa24.34■■□□□ 1.49
UBE2D3-215ENST00000503418 PDE8BO95263 885 aa24.34■■□□□ 1.49
UBE2D3-215ENST00000503418 SPDYE6P0CI01 402 aa24.34■■□□□ 1.49
UBE2D3-215ENST00000503418 RARSP54136 660 aaKnown RBP24.34■■□□□ 1.49
UBE2D3-215ENST00000503418 PRKG1Q13976 671 aa24.34■■□□□ 1.49
UBE2D3-215ENST00000503418 CAVIN4Q5BKX8 364 aa24.34■■□□□ 1.49
UBE2D3-215ENST00000503418 VGLL2Q8N8G2 317 aa24.34■■□□□ 1.49
UBE2D3-215ENST00000503418 COL1A1P02452 1464 aaPredicted RBP24.33■■□□□ 1.49
UBE2D3-215ENST00000503418 FRAT2O75474 233 aaPredicted RBP24.33■■□□□ 1.49
UBE2D3-215ENST00000503418 DEFB129Q9H1M3 183 aa24.33■■□□□ 1.49
UBE2D3-215ENST00000503418 VEZTQ9HBM0 779 aa24.33■■□□□ 1.49
UBE2D3-215ENST00000503418 CHAF1AQ13111 956 aaPredicted RBP24.32■■□□□ 1.48
UBE2D3-215ENST00000503418 FBXO33Q7Z6M2 555 aa24.32■■□□□ 1.48
UBE2D3-215ENST00000503418 PRMT6Q96LA8 375 aaPredicted RBP24.32■■□□□ 1.48
UBE2D3-215ENST00000503418 TTF2Q9UNY4 1162 aaKnown RBP24.32■■□□□ 1.48
UBE2D3-215ENST00000503418 KIF16BQ96L93 1317 aa24.32■■□□□ 1.48
UBE2D3-215ENST00000503418 RFX5P48382 616 aaPredicted RBP24.31■■□□□ 1.48
UBE2D3-215ENST00000503418 ARMC9Q7Z3E5 817 aa24.31■■□□□ 1.48
UBE2D3-215ENST00000503418 CSRNP1Q96S65 589 aa24.31■■□□□ 1.48
UBE2D3-215ENST00000503418 EYA2O00167 538 aa24.3■■□□□ 1.48
UBE2D3-215ENST00000503418 IFIT1P09914 478 aaKnown RBP24.3■■□□□ 1.48
UBE2D3-215ENST00000503418 PTPN12Q05209 780 aaKnown RBP24.3■■□□□ 1.48
UBE2D3-215ENST00000503418 PUM3Q15397 648 aaKnown RBP24.3■■□□□ 1.48
UBE2D3-215ENST00000503418 SAGE1Q9NXZ1 904 aa24.3■■□□□ 1.48
UBE2D3-215ENST00000503418 AOX1Q06278 1338 aa24.3■■□□□ 1.48
UBE2D3-215ENST00000503418 TRPA1O75762 1119 aa24.29■■□□□ 1.48
UBE2D3-215ENST00000503418 BCAMP50895 628 aa24.29■■□□□ 1.48
UBE2D3-215ENST00000503418 SIL1Q9H173 461 aa24.29■■□□□ 1.48
UBE2D3-215ENST00000503418 RNF186Q9NXI6 227 aa24.29■■□□□ 1.48
UBE2D3-215ENST00000503418 ANGEL1Q9UNK9 670 aaKnown RBP24.29■■□□□ 1.48
UBE2D3-215ENST00000503418 LRRFIP2Q9Y608 721 aaKnown RBP24.29■■□□□ 1.48
UBE2D3-215ENST00000503418 MYH13Q9UKX3 1938 aa24.28■■□□□ 1.48
UBE2D3-215ENST00000503418 MIER1Q8N108 512 aa24.28■■□□□ 1.48
UBE2D3-215ENST00000503418 ABHD8Q96I13 439 aa24.28■■□□□ 1.48
UBE2D3-215ENST00000503418 SERPINA10Q9UK55 444 aa24.28■■□□□ 1.48
UBE2D3-215ENST00000503418 FZD1Q9UP38 647 aa24.28■■□□□ 1.48
UBE2D3-215ENST00000503418 PPP2R3BQ9Y5P8 575 aa24.28■■□□□ 1.48
UBE2D3-215ENST00000503418 SLC5A1P13866 664 aa24.27■■□□□ 1.48
UBE2D3-215ENST00000503418 MKRN3Q13064 507 aaKnown RBP24.27■■□□□ 1.48
UBE2D3-215ENST00000503418 DIEXFQ68CQ4 756 aaKnown RBP24.27■■□□□ 1.48
UBE2D3-215ENST00000503418 REM2Q8IYK8 340 aaPredicted RBP24.27■■□□□ 1.48
UBE2D3-215ENST00000503418 TBC1D22AQ8WUA7 517 aa24.27■■□□□ 1.48
UBE2D3-215ENST00000503418 MEIS3Q99687 375 aa24.27■■□□□ 1.48
UBE2D3-215ENST00000503418 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.27■■□□□ 1.48
UBE2D3-215ENST00000503418 HDAC5Q9UQL6 1122 aa24.27■■□□□ 1.48
UBE2D3-215ENST00000503418 FGFR2P21802 821 aa24.26■■□□□ 1.47
UBE2D3-215ENST00000503418 CRKP46108 304 aa24.26■■□□□ 1.47
UBE2D3-215ENST00000503418 ARHGAP45Q92619 1136 aa24.26■■□□□ 1.47
UBE2D3-215ENST00000503418 TDRD3Q9H7E2 651 aaKnown RBP24.26■■□□□ 1.47
UBE2D3-215ENST00000503418 SSC5DA1L4H1 1573 aa24.25■■□□□ 1.47
UBE2D3-215ENST00000503418 GRIK5Q16478 980 aa24.25■■□□□ 1.47
UBE2D3-215ENST00000503418 ATG9AQ7Z3C6 839 aa24.25■■□□□ 1.47
UBE2D3-215ENST00000503418 LPIN2Q92539 896 aa24.25■■□□□ 1.47
UBE2D3-215ENST00000503418 PPP1R12BO60237 982 aaPredicted RBP24.24■■□□□ 1.47
UBE2D3-215ENST00000503418 HNRNPUQ00839 825 aaKnown RBP eCLIP24.24■■□□□ 1.47
UBE2D3-215ENST00000503418 RASA3Q14644 834 aa24.24■■□□□ 1.47
UBE2D3-215ENST00000503418 SUPT20HL1Q3ZLR7 823 aa24.24■■□□□ 1.47
UBE2D3-215ENST00000503418 SPDYE2Q495Y8 402 aa24.24■■□□□ 1.47
UBE2D3-215ENST00000503418 DZIP1LQ8IYY4 767 aaKnown RBP24.24■■□□□ 1.47
UBE2D3-215ENST00000503418 FRAT1Q92837 279 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms