RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 DLGAP5Q15398 846 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 SUPT20HL1Q3ZLR7 823 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 SPRYD7Q5W111 196 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 FBXO46Q6PJ61 603 aaPredicted RBP7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 ZNF296Q8WUU4 475 aaPredicted RBP7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 DEFB129Q9H1M3 183 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 PDE4DIPQ5VU43 2346 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 SPDYE2BA6NHP3 402 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 ZBTB22O15209 634 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 SPDYE6P0CI01 402 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 HDLBPQ00341 1268 aaKnown RBP7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 PTPN12Q05209 780 aaKnown RBP7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 TNFAIP1Q13829 316 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 CCDC184Q52MB2 194 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 KIAA0825Q8IV33 1275 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 CERS5Q8N5B7 392 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 MRIQ9BWK5 157 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 SERPINA10Q9UK55 444 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 HPS5Q9UPZ3 1129 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 SSC5DA1L4H1 1573 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 OTOFQ9HC10 1997 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 KIF16BQ96L93 1317 aa7.75□□□□□ -1.17
LSM3P4-201ENST00000502948 FKTNO75072 461 aa7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 KLRK1P26718 216 aa7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 EXOSC9Q06265 439 aaKnown RBP7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 TTLL12Q14166 644 aaPredicted RBP7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 CCDC57Q2TAC2 916 aa7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 RABL6Q3YEC7 729 aaPredicted RBP7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 INTS3Q68E01 1043 aaKnown RBP7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 LDHAL6AQ6ZMR3 332 aa7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 MOB2Q70IA6 237 aa7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 ANKRD13AQ8IZ07 590 aa7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 TDRD7Q8NHU6 1098 aaKnown RBP7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 MXD3Q9BW11 206 aa7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 SUGT1Q9Y2Z0 365 aa7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 MROH5Q6ZUA9 1318 aa7.74□□□□□ -1.17
LSM3P4-201ENST00000502948 TBC1D8O95759 1140 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 IREB2P48200 963 aaKnown RBP7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 CFAP100Q494V2 611 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 SPDYE2Q495Y8 402 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 PRPF38BQ5VTL8 546 aaKnown RBP7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 PRAMEF18Q5VWM3 479 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 OTUD7BQ6GQQ9 843 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 LMBR1LQ6UX01 489 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 IFNL1Q8IU54 200 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 TBC1D22AQ8WUA7 517 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 SLC10A4Q96EP9 437 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 WNK4Q96J92 1243 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 PRMT6Q96LA8 375 aaPredicted RBP7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 SRCIN1Q9C0H9 1055 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 MRS2Q9HD23 443 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 ZCCHC17Q9NP64 241 aaKnown RBP7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 ANGEL1Q9UNK9 670 aaKnown RBP7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 PTPRCP08575 1304 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 ZNF521Q96K83 1311 aa7.73□□□□□ -1.17
LSM3P4-201ENST00000502948 MYH13Q9UKX3 1938 aa7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 ANP32CO43423 234 aa7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 TAF5LO75529 589 aa7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 USP2O75604 605 aaPredicted RBP7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 HIBADHP31937 336 aaKnown RBP7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 ZEB1P37275 1124 aaPredicted RBP7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 FKBP1CQ5VVH2 108 aa7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 FBXW7Q969H0 707 aa7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 KAZALD1Q96I82 304 aa7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 FAM84BQ96KN1 310 aaPredicted RBP7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 CNNM1Q9NRU3 951 aa7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 C9orf78Q9NZ63 289 aaPredicted RBP7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 RIPOR2Q9Y4F9 1068 aa7.72□□□□□ -1.17
LSM3P4-201ENST00000502948 RPAP1Q9BWH6 1393 aaPredicted RBP7.71□□□□□ -1.17
LSM3P4-201ENST00000502948 F6X3S4 739 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 TNNI2P48788 182 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 RASA3Q14644 834 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 EPHA10Q5JZY3 1008 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 MFSD14BQ5SR56 506 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 FBXO33Q7Z6M2 555 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 FAM83AQ86UY5 434 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 HOOK2Q96ED9 719 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 ERO1AQ96HE7 468 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 TEPSINQ96N21 525 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 SPINK5Q9NQ38 1064 aaPredicted RBP7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 FBXO3Q9UK99 471 aa7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 SCAF8Q9UPN6 1271 aaKnown RBP7.71□□□□□ -1.18
LSM3P4-201ENST00000502948 IGF2BP3O00425 579 aaKnown RBP eCLIP7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 PDE8BO95263 885 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 GNRH1P01148 92 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 SOX10P56693 466 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 ARHGEF6Q15052 776 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 TAF7LQ5H9L4 462 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 NBPF12Q5TAG4 269 aaPredicted RBP7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 HHIPL2Q6UWX4 724 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 DZIP1LQ8IYY4 767 aaKnown RBP7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 VGLL2Q8N8G2 317 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 HELBQ8NG08 1087 aaPredicted RBP7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 ARMC5Q96C12 935 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 GCC1Q96CN9 775 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 MS4A4AQ96JQ5 239 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 ZNF70Q9UC06 446 aaPredicted RBP7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 TTF2Q9UNY4 1162 aaKnown RBP7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 MAST3O60307 1309 aa7.7□□□□□ -1.18
LSM3P4-201ENST00000502948 SNAP23O00161 211 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms