RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810		F6X3S4	739 aa		13.5	□□□□□ -0.25
CDK11A-222	ENST00000498810	UFL1	O94874	794 aa		13.5	□□□□□ -0.25
CDK11A-222	ENST00000498810	GCKR	Q14397	625 aa		13.5	□□□□□ -0.25
CDK11A-222	ENST00000498810	SEC31B	Q9NQW1	1179 aa		13.5	□□□□□ -0.25
CDK11A-222	ENST00000498810	IGHMBP2	P38935	993 aa	Known RBP	13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	PTPN5	P54829	565 aa		13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	KIAA2012	Q0VF49	1180 aa		13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	WASHC4	Q2M389	1173 aa		13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	BCL2L13	Q9BXK5	485 aa		13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	SMC4	Q9NTJ3	1288 aa		13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	GGA1	Q9UJY5	639 aa		13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	ZNRF3	Q9ULT6	936 aa		13.49	□□□□□ -0.25
CDK11A-222	ENST00000498810	EPHX2	P34913	555 aa		13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	GPSM2	P81274	684 aa		13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	SLFN5	Q08AF3	891 aa		13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	TAF7L	Q5H9L4	462 aa		13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	CIAPIN1	Q6FI81	312 aa		13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	PNMA8A	Q86V59	439 aa	Predicted RBP	13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	MPHOSPH8	Q99549	860 aa		13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	SRCIN1	Q9C0H9	1055 aa		13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	GREM2	Q9H772	168 aa		13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	TSKS	Q9UJT2	592 aa		13.48	□□□□□ -0.25
CDK11A-222	ENST00000498810	XDH	P47989	1333 aa		13.47	□□□□□ -0.25
CDK11A-222	ENST00000498810	TNIP1	Q15025	636 aa		13.47	□□□□□ -0.25
CDK11A-222	ENST00000498810	LDHD	Q86WU2	507 aa		13.47	□□□□□ -0.25
CDK11A-222	ENST00000498810	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.47	□□□□□ -0.25
CDK11A-222	ENST00000498810	DBNDD1	Q9H9R9	158 aa		13.47	□□□□□ -0.25
CDK11A-222	ENST00000498810	PLA2G2E	Q9NZK7	142 aa		13.47	□□□□□ -0.25
CDK11A-222	ENST00000498810		A0A1B0GUL6	1792 aa		13.47	□□□□□ -0.25
CDK11A-222	ENST00000498810	PSME4	Q14997	1843 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810	PTPRC	P08575	1304 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810	POTEC	B2RU33	542 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810		H7C1W4	665 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810	RAD17	O75943	681 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810	ITGA6	P23229	1130 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810	KCNJ4	P48050	445 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810	FAM161A	Q3B820	660 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810	TTLL11	Q8NHH1	800 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810	CDCA7L	Q96GN5	454 aa		13.46	□□□□□ -0.25
CDK11A-222	ENST00000498810	RTL9	Q8NET4	1388 aa		13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	ANKRD18B	A2A2Z9	1011 aa		13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	GRM8	O00222	908 aa		13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	ECE2	O60344	883 aa		13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	ALDH1L1	O75891	902 aa		13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	BEND3	Q5T5X7	828 aa		13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	TBC1D16	Q8TBP0	767 aa		13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	GPR101	Q96P66	508 aa	Predicted RBP	13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	ADAMTSL1	Q8N6G6	1762 aa		13.45	□□□□□ -0.26
CDK11A-222	ENST00000498810	ATP2B4	P23634	1241 aa		13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	GMPS	P49915	693 aa	Predicted RBP	13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	PRSS12	P56730	875 aa		13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	CXCL9	Q07325	125 aa		13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	IFIT5	Q13325	482 aa	Known RBP	13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	ANKK1	Q8NFD2	765 aa		13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	SSH1	Q8WYL5	1049 aa		13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	ZFR	Q96KR1	1074 aa	Known RBP	13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	POLL	Q9UGP5	575 aa		13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	TRPM7	Q96QT4	1865 aa		13.44	□□□□□ -0.26
CDK11A-222	ENST00000498810	CT47B1	P0C2W7	299 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	MLLT3	P42568	568 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	SCNN1D	P51172	638 aa		13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	CCDC57	Q2TAC2	916 aa		13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	ALDH1L2	Q3SY69	923 aa		13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	PACS2	Q86VP3	889 aa		13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	PLA2G12B	Q9BX93	195 aa		13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	CDHR5	Q9HBB8	845 aa		13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	BSDC1	Q9NW68	430 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	PODXL2	Q9NZ53	605 aa		13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	FAM198A	Q9UFP1	575 aa		13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	SCN9A	Q15858	1988 aa		13.43	□□□□□ -0.26
CDK11A-222	ENST00000498810	EPS15	P42566	896 aa		13.42	□□□□□ -0.26
CDK11A-222	ENST00000498810	HTRA3	P83110	453 aa		13.42	□□□□□ -0.26
CDK11A-222	ENST00000498810	ANKRD2	Q9GZV1	360 aa		13.42	□□□□□ -0.26
CDK11A-222	ENST00000498810	ADARB2	Q9NS39	739 aa	Known RBP	13.42	□□□□□ -0.26
CDK11A-222	ENST00000498810	GPRC5D	Q9NZD1	345 aa		13.42	□□□□□ -0.26
CDK11A-222	ENST00000498810		H7C1D1	291 aa		13.41	□□□□□ -0.26
CDK11A-222	ENST00000498810	PSMD14	O00487	310 aa		13.41	□□□□□ -0.26
CDK11A-222	ENST00000498810	CASP7	P55210	303 aa		13.41	□□□□□ -0.26
CDK11A-222	ENST00000498810	MAP1S	Q66K74	1059 aa	Predicted RBP	13.41	□□□□□ -0.26
CDK11A-222	ENST00000498810	LMBR1L	Q6UX01	489 aa		13.41	□□□□□ -0.26
CDK11A-222	ENST00000498810	USP50	Q70EL3	339 aa	Predicted RBP	13.41	□□□□□ -0.26
CDK11A-222	ENST00000498810	CNNM1	Q9NRU3	951 aa		13.41	□□□□□ -0.26
CDK11A-222	ENST00000498810	MED23	Q9ULK4	1368 aa		13.41	□□□□□ -0.26
CDK11A-222	ENST00000498810	KIF16B	Q96L93	1317 aa		13.4	□□□□□ -0.26
CDK11A-222	ENST00000498810	SOWAHB	A6NEL2	793 aa		13.4	□□□□□ -0.26
CDK11A-222	ENST00000498810	YDJC	A8MPS7	323 aa		13.4	□□□□□ -0.26
CDK11A-222	ENST00000498810	CCT4	P50991	539 aa	Known RBP	13.4	□□□□□ -0.26
CDK11A-222	ENST00000498810	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.4	□□□□□ -0.26
CDK11A-222	ENST00000498810	MINPP1	Q9UNW1	487 aa		13.4	□□□□□ -0.26
CDK11A-222	ENST00000498810	RPS12	P25398	132 aa	Known RBP	13.39	□□□□□ -0.27
CDK11A-222	ENST00000498810	API5	Q9BZZ5	524 aa	Known RBP	13.39	□□□□□ -0.27
CDK11A-222	ENST00000498810	MYH13	Q9UKX3	1938 aa		13.39	□□□□□ -0.27
CDK11A-222	ENST00000498810	PLIN1	O60240	522 aa		13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	CSF1R	P07333	972 aa		13.38	□□□□□ -0.27
CDK11A-222	ENST00000498810	BCAM	P50895	628 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms