RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, human

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CUL4A-211	ENST00000498562	TTLL12	Q14166	644 aa	Predicted RBP	32.75	■■■□□ 2.83
CUL4A-211	ENST00000498562	CNNM1	Q9NRU3	951 aa		32.75	■■■□□ 2.83
CUL4A-211	ENST00000498562	KAZALD1	Q96I82	304 aa		32.74	■■■□□ 2.83
CUL4A-211	ENST00000498562	PLIN1	O60240	522 aa		32.73	■■■□□ 2.83
CUL4A-211	ENST00000498562	FKBP1A	P62942	108 aa	Known RBP	32.73	■■■□□ 2.83
CUL4A-211	ENST00000498562	MTMR14	Q8NCE2	650 aa		32.73	■■■□□ 2.83
CUL4A-211	ENST00000498562	UTY	O14607	1347 aa		32.73	■■■□□ 2.83
CUL4A-211	ENST00000498562	NBPF7	P0C2Y1	421 aa	Predicted RBP	32.72	■■■□□ 2.83
CUL4A-211	ENST00000498562	DLGAP5	Q15398	846 aa		32.72	■■■□□ 2.83
CUL4A-211	ENST00000498562	ARAP2	Q8WZ64	1704 aa		32.71	■■■□□ 2.83
CUL4A-211	ENST00000498562	PCDHAC2	Q9Y5I4	1007 aa		32.71	■■■□□ 2.83
CUL4A-211	ENST00000498562	MRPL50	Q8N5N7	158 aa	Known RBP	32.7	■■■□□ 2.83
CUL4A-211	ENST00000498562	JAG2	Q9Y219	1238 aa		32.7	■■■□□ 2.83
CUL4A-211	ENST00000498562		F8W031	263 aa	Predicted RBP	32.69	■■■□□ 2.82
CUL4A-211	ENST00000498562	PUS3	Q9BZE2	481 aa	Known RBP	32.69	■■■□□ 2.82
CUL4A-211	ENST00000498562	SSC5D	A1L4H1	1573 aa		32.68	■■■□□ 2.82
CUL4A-211	ENST00000498562	UBE4A	Q14139	1066 aa		32.68	■■■□□ 2.82
CUL4A-211	ENST00000498562	ARMC9	Q7Z3E5	817 aa		32.68	■■■□□ 2.82
CUL4A-211	ENST00000498562	RGS19	P49795	217 aa		32.67	■■■□□ 2.82
CUL4A-211	ENST00000498562	PTPN12	Q05209	780 aa	Known RBP	32.67	■■■□□ 2.82
CUL4A-211	ENST00000498562	PRKG1	Q13976	671 aa		32.67	■■■□□ 2.82
CUL4A-211	ENST00000498562	CFAP100	Q494V2	611 aa		32.67	■■■□□ 2.82
CUL4A-211	ENST00000498562	DEFB129	Q9H1M3	183 aa		32.67	■■■□□ 2.82
CUL4A-211	ENST00000498562	SPDYE2B	A6NHP3	402 aa		32.66	■■■□□ 2.82
CUL4A-211	ENST00000498562	SPDYE6	P0CI01	402 aa		32.66	■■■□□ 2.82
CUL4A-211	ENST00000498562	RABL6	Q3YEC7	729 aa	Predicted RBP	32.66	■■■□□ 2.82
CUL4A-211	ENST00000498562	BICC1	Q9H694	974 aa	Known RBP	32.66	■■■□□ 2.82
CUL4A-211	ENST00000498562	FAM205A	Q6ZU69	1335 aa		32.66	■■■□□ 2.82
CUL4A-211	ENST00000498562		E9PSI1	815 aa		32.65	■■■□□ 2.82
CUL4A-211	ENST00000498562	TDRD7	Q8NHU6	1098 aa	Known RBP	32.65	■■■□□ 2.82
CUL4A-211	ENST00000498562	RIPOR2	Q9Y4F9	1068 aa		32.65	■■■□□ 2.82
CUL4A-211	ENST00000498562	PTPRC	P08575	1304 aa		32.65	■■■□□ 2.82
CUL4A-211	ENST00000498562	GYG1	P46976	350 aa		32.64	■■■□□ 2.82
CUL4A-211	ENST00000498562	AOX1	Q06278	1338 aa		32.64	■■■□□ 2.82
CUL4A-211	ENST00000498562	MKRN3	Q13064	507 aa	Known RBP	32.64	■■■□□ 2.82
CUL4A-211	ENST00000498562	LDLRAD1	Q5T700	205 aa		32.64	■■■□□ 2.82
CUL4A-211	ENST00000498562	ANGEL1	Q9UNK9	670 aa	Known RBP	32.64	■■■□□ 2.82
CUL4A-211	ENST00000498562	FZD1	Q9UP38	647 aa		32.64	■■■□□ 2.82
CUL4A-211	ENST00000498562	PPP2R3B	Q9Y5P8	575 aa		32.64	■■■□□ 2.82
CUL4A-211	ENST00000498562	CLRN2	A0PK11	232 aa		32.63	■■■□□ 2.81
CUL4A-211	ENST00000498562	TM4SF4	P48230	202 aa		32.63	■■■□□ 2.81
CUL4A-211	ENST00000498562	ANKRD44	Q8N8A2	993 aa		32.63	■■■□□ 2.81
CUL4A-211	ENST00000498562	FAM84B	Q96KN1	310 aa	Predicted RBP	32.63	■■■□□ 2.81
CUL4A-211	ENST00000498562	PRMT6	Q96LA8	375 aa	Predicted RBP	32.63	■■■□□ 2.81
CUL4A-211	ENST00000498562	MROH5	Q6ZUA9	1318 aa		32.62	■■■□□ 2.81
CUL4A-211	ENST00000498562	MYO1B	O43795	1136 aa		32.62	■■■□□ 2.81
CUL4A-211	ENST00000498562	HIBADH	P31937	336 aa	Known RBP	32.62	■■■□□ 2.81
CUL4A-211	ENST00000498562	SSH1	Q8WYL5	1049 aa		32.62	■■■□□ 2.81
CUL4A-211	ENST00000498562	LAMB1	P07942	1786 aa		32.62	■■■□□ 2.81
CUL4A-211	ENST00000498562	MAP3K11	Q16584	847 aa		32.61	■■■□□ 2.81
CUL4A-211	ENST00000498562	MFSD14B	Q5SR56	506 aa		32.6	■■■□□ 2.81
CUL4A-211	ENST00000498562	MLLT1	Q03111	559 aa	Predicted RBP	32.59	■■■□□ 2.81
CUL4A-211	ENST00000498562	SLFN5	Q08AF3	891 aa		32.59	■■■□□ 2.81
CUL4A-211	ENST00000498562	SREBF2	Q12772	1141 aa		32.59	■■■□□ 2.81
CUL4A-211	ENST00000498562	CTU1	Q7Z7A3	348 aa	Known RBP	32.59	■■■□□ 2.81
CUL4A-211	ENST00000498562	VEZT	Q9HBM0	779 aa		32.59	■■■□□ 2.81
CUL4A-211	ENST00000498562	TBC1D8	O95759	1140 aa		32.58	■■■□□ 2.81
CUL4A-211	ENST00000498562	RBM5	P52756	815 aa	Known RBP eCLIP	32.58	■■■□□ 2.81	2e-8	■■■■■ 30
CUL4A-211	ENST00000498562	LRRC24	Q50LG9	513 aa		32.58	■■■□□ 2.81
CUL4A-211	ENST00000498562	SPRYD7	Q5W111	196 aa		32.58	■■■□□ 2.81
CUL4A-211	ENST00000498562	VGLL2	Q8N8G2	317 aa		32.56	■■■□□ 2.8
CUL4A-211	ENST00000498562	ZNF296	Q8WUU4	475 aa	Predicted RBP	32.56	■■■□□ 2.8
CUL4A-211	ENST00000498562	SERPINA10	Q9UK55	444 aa		32.56	■■■□□ 2.8
CUL4A-211	ENST00000498562	TTF2	Q9UNY4	1162 aa	Known RBP	32.56	■■■□□ 2.8
CUL4A-211	ENST00000498562	PPP1R12B	O60237	982 aa	Predicted RBP	32.55	■■■□□ 2.8
CUL4A-211	ENST00000498562	FBXO33	Q7Z6M2	555 aa		32.55	■■■□□ 2.8
CUL4A-211	ENST00000498562	USP44	Q9H0E7	712 aa		32.55	■■■□□ 2.8
CUL4A-211	ENST00000498562	OTOF	Q9HC10	1997 aa		32.54	■■■□□ 2.8
CUL4A-211	ENST00000498562	SUPT20HL1	Q3ZLR7	823 aa		32.54	■■■□□ 2.8
CUL4A-211	ENST00000498562	SPDYE2	Q495Y8	402 aa		32.54	■■■□□ 2.8
CUL4A-211	ENST00000498562	METTL24	Q5JXM2	366 aa		32.54	■■■□□ 2.8
CUL4A-211	ENST00000498562	NBPF12	Q5TAG4	269 aa	Predicted RBP	32.54	■■■□□ 2.8
CUL4A-211	ENST00000498562	RASA3	Q14644	834 aa		32.53	■■■□□ 2.8
CUL4A-211	ENST00000498562	NOM1	Q5C9Z4	860 aa	Known RBP	32.53	■■■□□ 2.8
CUL4A-211	ENST00000498562	KLHDC4	Q8TBB5	520 aa		32.53	■■■□□ 2.8
CUL4A-211	ENST00000498562	CLMN	Q96JQ2	1002 aa		32.53	■■■□□ 2.8
CUL4A-211	ENST00000498562	CFHR5	Q9BXR6	569 aa		32.53	■■■□□ 2.8
CUL4A-211	ENST00000498562	ALDH1L2	Q3SY69	923 aa		32.52	■■■□□ 2.8
CUL4A-211	ENST00000498562	SLC10A4	Q96EP9	437 aa		32.52	■■■□□ 2.8
CUL4A-211	ENST00000498562	CDCA7L	Q96GN5	454 aa		32.52	■■■□□ 2.8
CUL4A-211	ENST00000498562	ZNF70	Q9UC06	446 aa	Predicted RBP	32.52	■■■□□ 2.8
CUL4A-211	ENST00000498562	GPR25	O00155	361 aa		32.51	■■■□□ 2.79
CUL4A-211	ENST00000498562	PDE8B	O95263	885 aa		32.51	■■■□□ 2.79
CUL4A-211	ENST00000498562	VPS37D	Q86XT2	251 aa		32.51	■■■□□ 2.79
CUL4A-211	ENST00000498562	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	32.51	■■■□□ 2.79
CUL4A-211	ENST00000498562	UNCX	A6NJT0	531 aa		32.5	■■■□□ 2.79
CUL4A-211	ENST00000498562	ZBTB48	P10074	688 aa	Predicted RBP	32.5	■■■□□ 2.79
CUL4A-211	ENST00000498562	TNFAIP1	Q13829	316 aa		32.5	■■■□□ 2.79
CUL4A-211	ENST00000498562	GRIK5	Q16478	980 aa		32.5	■■■□□ 2.79
CUL4A-211	ENST00000498562	DZIP1L	Q8IYY4	767 aa	Known RBP	32.5	■■■□□ 2.79
CUL4A-211	ENST00000498562	WNK4	Q96J92	1243 aa		32.5	■■■□□ 2.79
CUL4A-211	ENST00000498562	TDRD3	Q9H7E2	651 aa	Known RBP	32.5	■■■□□ 2.79
CUL4A-211	ENST00000498562	CRK	P46108	304 aa		32.49	■■■□□ 2.79
CUL4A-211	ENST00000498562	CAVIN4	Q5BKX8	364 aa		32.49	■■■□□ 2.79
CUL4A-211	ENST00000498562	MANSC4	A6NHS7	340 aa	Predicted RBP	32.48	■■■□□ 2.79
CUL4A-211	ENST00000498562	USP2	O75604	605 aa	Predicted RBP	32.48	■■■□□ 2.79
CUL4A-211	ENST00000498562	IREB2	P48200	963 aa	Known RBP	32.48	■■■□□ 2.79
CUL4A-211	ENST00000498562	R3HDML	Q9H3Y0	253 aa		32.48	■■■□□ 2.79
CUL4A-211	ENST00000498562	SMC4	Q9NTJ3	1288 aa		32.48	■■■□□ 2.79
CUL4A-211	ENST00000498562	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.48	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 272.5 ms