RNA–Protein interactions for RNA: ENST00000496530.1

SMARCD3-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-215ENST00000496530 KIF4BQ2VIQ3 1234 aa10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 HSP90AB4PQ58FF6 505 aa10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 RBM26Q5T8P6 1007 aaKnown RBP10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 TXNRD3Q86VQ6 643 aa10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 CNTROBQ8N137 903 aa10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 SSH3Q8TE77 659 aa10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 CNKSR2Q8WXI2 1034 aa10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 DCPSQ96C86 337 aaKnown RBP10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 KCNQ5Q9NR82 932 aa10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 GNL3LQ9NVN8 582 aaKnown RBP10.05□□□□□ -0.8
SMARCD3-215ENST00000496530 ADAMTSL1Q8N6G6 1762 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 SMARCA5O60264 1052 aaPredicted RBP10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 SASH1O94885 1247 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 POTEIP0CG38 1075 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 POTEJP0CG39 1038 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 KLRK1P26718 216 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 FKBP1AP62942 108 aaKnown RBP10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 HDAC1Q13547 482 aaPredicted RBP10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 POLA2Q14181 598 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 ATP2B3Q16720 1220 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 TBC1D10BQ4KMP7 808 aaPredicted RBP10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 CDC37L1Q7L3B6 337 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 TBC1D22AQ8WUA7 517 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 GCC1Q96CN9 775 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 NEUROD6Q96NK8 337 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 DCTPP1Q9H773 170 aa10.04□□□□□ -0.8
SMARCD3-215ENST00000496530 SCN9AQ15858 1988 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 WTIPA6NIX2 430 aaPredicted RBP10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 SNAP23O00161 211 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 MYO1BO43795 1136 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 RAB11FIP3O75154 756 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 GYG1P46976 350 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 DACT2Q5SW24 774 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 GORABQ5T7V8 394 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 MAP1SQ66K74 1059 aaPredicted RBP10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 CENPQQ7L2Z9 268 aaPredicted RBP10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 SAMD7Q7Z3H4 446 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 VGLL2Q8N8G2 317 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 TDRD7Q8NHU6 1098 aaKnown RBP10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 FAM84BQ96KN1 310 aaPredicted RBP10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 MYOZ2Q9NPC6 264 aa10.03□□□□□ -0.8
SMARCD3-215ENST00000496530 TMEM88BA6NKF7 163 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 ZNF280AP59817 542 aaPredicted RBP10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 TFCP2Q12800 502 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 MFSD14BQ5SR56 506 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 ATG9AQ7Z3C6 839 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 KIAA0825Q8IV33 1275 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 TRPM4Q8TD43 1214 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 IL1RAPL2Q9NP60 686 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 CREBZFQ9NS37 354 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 MAST3O60307 1309 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 FAM205AQ6ZU69 1335 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 IRS2Q9Y4H2 1338 aa10.02□□□□□ -0.81
SMARCD3-215ENST00000496530 MYH13Q9UKX3 1938 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 FGFR2P21802 821 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 RBM5P52756 815 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 TIMM10P62072 90 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 CHAF1AQ13111 956 aaPredicted RBP10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 DLGAP5Q15398 846 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 FBXO33Q7Z6M2 555 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 ERC1Q8IUD2 1116 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 ZGPATQ8N5A5 531 aaKnown RBP10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 WDR66Q8TBY9 1149 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 RHPN1Q8TCX5 695 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 LRRCC1Q9C099 1032 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 LNPKQ9C0E8 428 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 CCDC8Q9H0W5 538 aaPredicted RBP10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 PGAP2Q9UHJ9 254 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 DENND2AQ9ULE3 1009 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 PASKQ96RG2 1323 aa10.01□□□□□ -0.81
SMARCD3-215ENST00000496530 ARAP2Q8WZ64 1704 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 F8W031 263 aaPredicted RBP10□□□□□ -0.81
SMARCD3-215ENST00000496530 SEMA3EO15041 775 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 ITGBL1O95965 494 aaPredicted RBP10□□□□□ -0.81
SMARCD3-215ENST00000496530 IFIT2P09913 472 aaKnown RBP10□□□□□ -0.81
SMARCD3-215ENST00000496530 NF2P35240 595 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 RGS3P49796 1198 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 BCAMP50895 628 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 SCARF1Q14162 830 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 IFFO2Q5TF58 517 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 KRT26Q7Z3Y9 468 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 CHD1LQ86WJ1 897 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 CLASRPQ8N2M8 674 aaKnown RBP10□□□□□ -0.81
SMARCD3-215ENST00000496530 KIF1BPQ96EK5 621 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 GMLQ99445 158 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 GGA3Q9NZ52 723 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 ABT1Q9ULW3 272 aaKnown RBP10□□□□□ -0.81
SMARCD3-215ENST00000496530 NOP58Q9Y2X3 529 aaKnown RBP10□□□□□ -0.81
SMARCD3-215ENST00000496530 SUGT1Q9Y2Z0 365 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 PITPNM2Q9BZ72 1349 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 TRPM7Q96QT4 1865 aa10□□□□□ -0.81
SMARCD3-215ENST00000496530 A0A1B0GUL7 405 aa9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 SHTN1A0MZ66 631 aa9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 HIRAP54198 1017 aaPredicted RBP9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 CCDC158Q5M9N0 1113 aa9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 ANGEL2Q5VTE6 544 aaKnown RBP9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 AACSQ86V21 672 aa9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 APOBEC3FQ8IUX4 373 aaKnown RBP9.99□□□□□ -0.81
SMARCD3-215ENST00000496530 MXD3Q9BW11 206 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms