RNA–Protein interactions for RNA: ENST00000496363.5

USF1-207, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 990 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-207ENST00000496363 RGS19P49795 217 aa16.51■□□□□ 0.23
USF1-207ENST00000496363 MMP14P50281 582 aa16.51■□□□□ 0.23
USF1-207ENST00000496363 MLLT1Q03111 559 aaPredicted RBP16.51■□□□□ 0.23
USF1-207ENST00000496363 PTPN12Q05209 780 aaKnown RBP16.51■□□□□ 0.23
USF1-207ENST00000496363 CCDC57Q2TAC2 916 aa16.51■□□□□ 0.23
USF1-207ENST00000496363 LDHAL6AQ6ZMR3 332 aa16.51■□□□□ 0.23
USF1-207ENST00000496363 ZNF804AQ7Z570 1209 aa16.51■□□□□ 0.23
USF1-207ENST00000496363 REM2Q8IYK8 340 aaPredicted RBP16.51■□□□□ 0.23
USF1-207ENST00000496363 CNNM1Q9NRU3 951 aa16.51■□□□□ 0.23
USF1-207ENST00000496363 ALDH1L1O75891 902 aa16.5■□□□□ 0.23
USF1-207ENST00000496363 DLGAP5Q15398 846 aa16.5■□□□□ 0.23
USF1-207ENST00000496363 KAZALD1Q96I82 304 aa16.5■□□□□ 0.23
USF1-207ENST00000496363 SUCLG2Q96I99 432 aa16.5■□□□□ 0.23
USF1-207ENST00000496363 SRCIN1Q9C0H9 1055 aa16.5■□□□□ 0.23
USF1-207ENST00000496363 SSC5DA1L4H1 1573 aa16.5■□□□□ 0.23
USF1-207ENST00000496363 ZNF521Q96K83 1311 aa16.49■□□□□ 0.23
USF1-207ENST00000496363 CLRN2A0PK11 232 aa16.49■□□□□ 0.23
USF1-207ENST00000496363 TBC1D8O95759 1140 aa16.49■□□□□ 0.23
USF1-207ENST00000496363 CFAP100Q494V2 611 aa16.49■□□□□ 0.23
USF1-207ENST00000496363 ARAP2Q8WZ64 1704 aa16.49■□□□□ 0.23
USF1-207ENST00000496363 PUS3Q9BZE2 481 aaKnown RBP16.49■□□□□ 0.23
USF1-207ENST00000496363 DEFB129Q9H1M3 183 aa16.49■□□□□ 0.23
USF1-207ENST00000496363 ANGEL1Q9UNK9 670 aaKnown RBP16.49■□□□□ 0.23
USF1-207ENST00000496363 PDE4DIPQ5VU43 2346 aa16.48■□□□□ 0.23
USF1-207ENST00000496363 COL1A1P02452 1464 aaPredicted RBP16.48■□□□□ 0.23
USF1-207ENST00000496363 NBPF7P0C2Y1 421 aaPredicted RBP16.48■□□□□ 0.23
USF1-207ENST00000496363 ARMC9Q7Z3E5 817 aa16.48■□□□□ 0.23
USF1-207ENST00000496363 MTMR14Q8NCE2 650 aa16.48■□□□□ 0.23
USF1-207ENST00000496363 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
USF1-207ENST00000496363 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
USF1-207ENST00000496363 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
USF1-207ENST00000496363 GYG1P46976 350 aa16.47■□□□□ 0.23
USF1-207ENST00000496363 LDLRAD1Q5T700 205 aa16.47■□□□□ 0.23
USF1-207ENST00000496363 CTU1Q7Z7A3 348 aaKnown RBP16.47■□□□□ 0.23
USF1-207ENST00000496363 PRMT6Q96LA8 375 aaPredicted RBP16.47■□□□□ 0.23
USF1-207ENST00000496363 TM4SF4P48230 202 aa16.46■□□□□ 0.23
USF1-207ENST00000496363 SOX10P56693 466 aa16.46■□□□□ 0.23
USF1-207ENST00000496363 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
USF1-207ENST00000496363 MRPL50Q8N5N7 158 aaKnown RBP16.46■□□□□ 0.23
USF1-207ENST00000496363 ZNF296Q8WUU4 475 aaPredicted RBP16.46■□□□□ 0.23
USF1-207ENST00000496363 VEZTQ9HBM0 779 aa16.46■□□□□ 0.23
USF1-207ENST00000496363 OTOFQ9HC10 1997 aa16.46■□□□□ 0.22
USF1-207ENST00000496363 RBM5P52756 815 aaKnown RBP eCLIP16.45■□□□□ 0.22
USF1-207ENST00000496363 SPRYD7Q5W111 196 aa16.45■□□□□ 0.22
USF1-207ENST00000496363 CLMNQ96JQ2 1002 aa16.45■□□□□ 0.22
USF1-207ENST00000496363 R3HDMLQ9H3Y0 253 aa16.45■□□□□ 0.22
USF1-207ENST00000496363 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
USF1-207ENST00000496363 LAMB1P07942 1786 aa16.45■□□□□ 0.22
USF1-207ENST00000496363 UTYO14607 1347 aa16.45■□□□□ 0.22
USF1-207ENST00000496363 FAM205AQ6ZU69 1335 aa16.45■□□□□ 0.22
USF1-207ENST00000496363 HTTP42858 3142 aa16.44■□□□□ 0.22
USF1-207ENST00000496363 SREBF2Q12772 1141 aa16.44■□□□□ 0.22
USF1-207ENST00000496363 UBE4AQ14139 1066 aa16.44■□□□□ 0.22
USF1-207ENST00000496363 MFSD14BQ5SR56 506 aa16.44■□□□□ 0.22
USF1-207ENST00000496363 ANKRD44Q8N8A2 993 aa16.44■□□□□ 0.22
USF1-207ENST00000496363 TDRD7Q8NHU6 1098 aaKnown RBP16.44■□□□□ 0.22
USF1-207ENST00000496363 FAM84BQ96KN1 310 aaPredicted RBP16.44■□□□□ 0.22
USF1-207ENST00000496363 RIPOR2Q9Y4F9 1068 aa16.44■□□□□ 0.22
USF1-207ENST00000496363 GPR25O00155 361 aa16.43■□□□□ 0.22
USF1-207ENST00000496363 MYO1BO43795 1136 aa16.43■□□□□ 0.22
USF1-207ENST00000496363 HIBADHP31937 336 aaKnown RBP16.43■□□□□ 0.22
USF1-207ENST00000496363 LRRC24Q50LG9 513 aa16.43■□□□□ 0.22
USF1-207ENST00000496363 NBPF12Q5TAG4 269 aaPredicted RBP16.43■□□□□ 0.22
USF1-207ENST00000496363 TTF2Q9UNY4 1162 aaKnown RBP16.43■□□□□ 0.22
USF1-207ENST00000496363 PPP2R3BQ9Y5P8 575 aa16.43■□□□□ 0.22
USF1-207ENST00000496363 GRIK5Q16478 980 aa16.42■□□□□ 0.22
USF1-207ENST00000496363 MAP3K11Q16584 847 aa16.42■□□□□ 0.22
USF1-207ENST00000496363 RABL6Q3YEC7 729 aaPredicted RBP16.42■□□□□ 0.22
USF1-207ENST00000496363 SSH1Q8WYL5 1049 aa16.42■□□□□ 0.22
USF1-207ENST00000496363 SLC10A4Q96EP9 437 aa16.42■□□□□ 0.22
USF1-207ENST00000496363 WNK4Q96J92 1243 aa16.42■□□□□ 0.22
USF1-207ENST00000496363 IQSEC3Q9UPP2 1182 aaPredicted RBP16.42■□□□□ 0.22
USF1-207ENST00000496363 HPS5Q9UPZ3 1129 aa16.42■□□□□ 0.22
USF1-207ENST00000496363 MROH5Q6ZUA9 1318 aa16.42■□□□□ 0.22
USF1-207ENST00000496363 PPP1R12BO60237 982 aaPredicted RBP16.41■□□□□ 0.22
USF1-207ENST00000496363 RASA3Q14644 834 aa16.41■□□□□ 0.22
USF1-207ENST00000496363 CDAN1Q8IWY9 1227 aa16.41■□□□□ 0.22
USF1-207ENST00000496363 KLHDC4Q8TBB5 520 aa16.41■□□□□ 0.22
USF1-207ENST00000496363 ZNF70Q9UC06 446 aaPredicted RBP16.41■□□□□ 0.22
USF1-207ENST00000496363 MYH13Q9UKX3 1938 aa16.41■□□□□ 0.22
USF1-207ENST00000496363 CHAF1AQ13111 956 aaPredicted RBP16.4■□□□□ 0.22
USF1-207ENST00000496363 SUPT20HL1Q3ZLR7 823 aa16.4■□□□□ 0.22
USF1-207ENST00000496363 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
USF1-207ENST00000496363 METTL24Q5JXM2 366 aa16.4■□□□□ 0.22
USF1-207ENST00000496363 TDRD3Q9H7E2 651 aaKnown RBP16.4■□□□□ 0.22
USF1-207ENST00000496363 CENPFP49454 3210 aa16.4■□□□□ 0.22
USF1-207ENST00000496363 PTPRCP08575 1304 aa16.4■□□□□ 0.22
USF1-207ENST00000496363 E9PSI1 815 aa16.39■□□□□ 0.21
USF1-207ENST00000496363 USP2O75604 605 aaPredicted RBP16.39■□□□□ 0.21
USF1-207ENST00000496363 GJA5P36382 358 aa16.39■□□□□ 0.21
USF1-207ENST00000496363 FBXO33Q7Z6M2 555 aa16.39■□□□□ 0.21
USF1-207ENST00000496363 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
USF1-207ENST00000496363 VGLL2Q8N8G2 317 aa16.39■□□□□ 0.21
USF1-207ENST00000496363 CFHR5Q9BXR6 569 aa16.39■□□□□ 0.21
USF1-207ENST00000496363 SERPINA10Q9UK55 444 aa16.39■□□□□ 0.21
USF1-207ENST00000496363 MANSC4A6NHS7 340 aaPredicted RBP16.38■□□□□ 0.21
USF1-207ENST00000496363 IGF2BP3O00425 579 aaKnown RBP eCLIP16.38■□□□□ 0.21
USF1-207ENST00000496363 FKTNO75072 461 aa16.38■□□□□ 0.21
USF1-207ENST00000496363 ZBTB48P10074 688 aaPredicted RBP16.38■□□□□ 0.21
USF1-207ENST00000496363 CRKP46108 304 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms