RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 PDE8BO95263 885 aa30.34■■■□□ 2.45
HLA-C-209ENST00000495835 FAM84BQ96KN1 310 aaPredicted RBP30.34■■■□□ 2.45
HLA-C-209ENST00000495835 FBXO3Q9UK99 471 aa30.34■■■□□ 2.45
HLA-C-209ENST00000495835 NOGQ13253 232 aa30.33■■■□□ 2.45
HLA-C-209ENST00000495835 LRRC24Q50LG9 513 aa30.33■■■□□ 2.45
HLA-C-209ENST00000495835 METTL24Q5JXM2 366 aa30.33■■■□□ 2.45
HLA-C-209ENST00000495835 CERS5Q8N5B7 392 aa30.33■■■□□ 2.45
HLA-C-209ENST00000495835 BEGAINQ9BUH8 593 aa30.33■■■□□ 2.45
HLA-C-209ENST00000495835 GRM1Q13255 1194 aa30.32■■■□□ 2.44
HLA-C-209ENST00000495835 INTS3Q68E01 1043 aaKnown RBP30.32■■■□□ 2.44
HLA-C-209ENST00000495835 RGMBQ6NW40 437 aa30.32■■■□□ 2.44
HLA-C-209ENST00000495835 VGLL2Q8N8G2 317 aa30.32■■■□□ 2.44
HLA-C-209ENST00000495835 CCDC102AQ96A19 550 aa30.32■■■□□ 2.44
HLA-C-209ENST00000495835 RFX5P48382 616 aaPredicted RBP30.31■■■□□ 2.44
HLA-C-209ENST00000495835 APOBEC3FQ8IUX4 373 aaKnown RBP30.31■■■□□ 2.44
HLA-C-209ENST00000495835 GYG1P46976 350 aa30.3■■■□□ 2.44
HLA-C-209ENST00000495835 DLGAP5Q15398 846 aa30.3■■■□□ 2.44
HLA-C-209ENST00000495835 CAVIN4Q5BKX8 364 aa30.3■■■□□ 2.44
HLA-C-209ENST00000495835 FBXO33Q7Z6M2 555 aa30.3■■■□□ 2.44
HLA-C-209ENST00000495835 EYA2O00167 538 aa30.29■■■□□ 2.44
HLA-C-209ENST00000495835 AOC2O75106 756 aa30.29■■■□□ 2.44
HLA-C-209ENST00000495835 HNRNPUQ00839 825 aaKnown RBP eCLIP30.29■■■□□ 2.44
HLA-C-209ENST00000495835 PTPN12Q05209 780 aaKnown RBP30.29■■■□□ 2.44
HLA-C-209ENST00000495835 CA12O43570 354 aa30.28■■■□□ 2.44
HLA-C-209ENST00000495835 VPS37DQ86XT2 251 aa30.28■■■□□ 2.44
HLA-C-209ENST00000495835 TNS4Q8IZW8 715 aa30.28■■■□□ 2.44
HLA-C-209ENST00000495835 ECM29Q5VYK3 1845 aa30.27■■■□□ 2.44
HLA-C-209ENST00000495835 KLHDC4Q8TBB5 520 aa30.27■■■□□ 2.44
HLA-C-209ENST00000495835 PAPPA2Q9BXP8 1791 aa30.27■■■□□ 2.44
HLA-C-209ENST00000495835 COL1A1P02452 1464 aaPredicted RBP30.26■■■□□ 2.44
HLA-C-209ENST00000495835 GNAI3P08754 354 aa30.26■■■□□ 2.43
HLA-C-209ENST00000495835 NF2P35240 595 aa30.26■■■□□ 2.43
HLA-C-209ENST00000495835 PUM3Q15397 648 aaKnown RBP30.26■■■□□ 2.43
HLA-C-209ENST00000495835 MYO1BO43795 1136 aa30.25■■■□□ 2.43
HLA-C-209ENST00000495835 CIAO1O76071 339 aa30.25■■■□□ 2.43
HLA-C-209ENST00000495835 IFIT1P09914 478 aaKnown RBP30.25■■■□□ 2.43
HLA-C-209ENST00000495835 HSPA8P11142 646 aaKnown RBP30.25■■■□□ 2.43
HLA-C-209ENST00000495835 FGFR2P21802 821 aa30.25■■■□□ 2.43
HLA-C-209ENST00000495835 ZNF157P51786 506 aaPredicted RBP30.25■■■□□ 2.43
HLA-C-209ENST00000495835 MFSD14BQ5SR56 506 aa30.25■■■□□ 2.43
HLA-C-209ENST00000495835 ATF7IPQ6VMQ6 1270 aa30.25■■■□□ 2.43
HLA-C-209ENST00000495835 FAM155AB1AL88 458 aaPredicted RBP30.24■■■□□ 2.43
HLA-C-209ENST00000495835 LBX1P52954 281 aa30.23■■■□□ 2.43
HLA-C-209ENST00000495835 CFAP100Q494V2 611 aa30.23■■■□□ 2.43
HLA-C-209ENST00000495835 TBC1D22AQ8WUA7 517 aa30.23■■■□□ 2.43
HLA-C-209ENST00000495835 SERPINA10Q9UK55 444 aa30.23■■■□□ 2.43
HLA-C-209ENST00000495835 PPP2R3BQ9Y5P8 575 aa30.23■■■□□ 2.43
HLA-C-209ENST00000495835 LRRFIP2Q9Y608 721 aaKnown RBP30.23■■■□□ 2.43
HLA-C-209ENST00000495835 ARAP2Q8WZ64 1704 aa30.22■■■□□ 2.43
HLA-C-209ENST00000495835 SPDYE2BA6NHP3 402 aa30.22■■■□□ 2.43
HLA-C-209ENST00000495835 SPDYE6P0CI01 402 aa30.22■■■□□ 2.43
HLA-C-209ENST00000495835 ATG9AQ7Z3C6 839 aa30.22■■■□□ 2.43
HLA-C-209ENST00000495835 REM2Q8IYK8 340 aaPredicted RBP30.22■■■□□ 2.43
HLA-C-209ENST00000495835 LPIN2Q92539 896 aa30.22■■■□□ 2.43
HLA-C-209ENST00000495835 MEIS3Q99687 375 aa30.22■■■□□ 2.43
HLA-C-209ENST00000495835 F8W031 263 aaPredicted RBP30.21■■■□□ 2.43
HLA-C-209ENST00000495835 SLC10A3P09131 477 aa30.21■■■□□ 2.43
HLA-C-209ENST00000495835 TRIM27P14373 513 aa30.21■■■□□ 2.43
HLA-C-209ENST00000495835 FRAT2O75474 233 aaPredicted RBP30.2■■■□□ 2.43
HLA-C-209ENST00000495835 BCAR3O75815 825 aa30.2■■■□□ 2.43
HLA-C-209ENST00000495835 SLC5A1P13866 664 aa30.2■■■□□ 2.43
HLA-C-209ENST00000495835 COPRSQ9NQ92 184 aa30.2■■■□□ 2.43
HLA-C-209ENST00000495835 JAG2Q9Y219 1238 aa30.2■■■□□ 2.43
HLA-C-209ENST00000495835 IL15P40933 162 aaPredicted RBP30.19■■■□□ 2.42
HLA-C-209ENST00000495835 PRMT6Q96LA8 375 aaPredicted RBP30.19■■■□□ 2.42
HLA-C-209ENST00000495835 CEP126Q9P2H0 1117 aa30.19■■■□□ 2.42
HLA-C-209ENST00000495835 TTF2Q9UNY4 1162 aaKnown RBP30.19■■■□□ 2.42
HLA-C-209ENST00000495835 SCAF8Q9UPN6 1271 aaKnown RBP30.19■■■□□ 2.42
HLA-C-209ENST00000495835 HDLBPQ00341 1268 aaKnown RBP30.18■■■□□ 2.42
HLA-C-209ENST00000495835 MTX1Q13505 466 aa30.18■■■□□ 2.42
HLA-C-209ENST00000495835 FRAT1Q92837 279 aaPredicted RBP30.18■■■□□ 2.42
HLA-C-209ENST00000495835 MRIQ9BWK5 157 aa30.18■■■□□ 2.42
HLA-C-209ENST00000495835 DEFB129Q9H1M3 183 aa30.18■■■□□ 2.42
HLA-C-209ENST00000495835 SUGT1Q9Y2Z0 365 aa30.18■■■□□ 2.42
HLA-C-209ENST00000495835 ZBED9Q6R2W3 1325 aa30.18■■■□□ 2.42
HLA-C-209ENST00000495835 BCAMP50895 628 aa30.17■■■□□ 2.42
HLA-C-209ENST00000495835 RBM5P52756 815 aaKnown RBP eCLIP30.17■■■□□ 2.42
HLA-C-209ENST00000495835 PRAMEF18Q5VWM3 479 aa30.17■■■□□ 2.42
HLA-C-209ENST00000495835 ZKSCAN2Q63HK3 967 aa30.16■■■□□ 2.42
HLA-C-209ENST00000495835 ZBTB22O15209 634 aa30.15■■■□□ 2.42
HLA-C-209ENST00000495835 KIF23Q02241 960 aaPredicted RBP30.15■■■□□ 2.42
HLA-C-209ENST00000495835 ARMC9Q7Z3E5 817 aa30.15■■■□□ 2.42
HLA-C-209ENST00000495835 ZIC5Q96T25 663 aa30.15■■■□□ 2.42
HLA-C-209ENST00000495835 SIL1Q9H173 461 aa30.15■■■□□ 2.42
HLA-C-209ENST00000495835 TNFAIP1Q13829 316 aa30.14■■■□□ 2.42
HLA-C-209ENST00000495835 TTLL12Q14166 644 aaPredicted RBP30.14■■■□□ 2.42
HLA-C-209ENST00000495835 RASAL3Q86YV0 1011 aa30.14■■■□□ 2.42
HLA-C-209ENST00000495835 SAGE1Q9NXZ1 904 aa30.14■■■□□ 2.42
HLA-C-209ENST00000495835 IQSEC3Q9UPP2 1182 aaPredicted RBP30.14■■■□□ 2.42
HLA-C-209ENST00000495835 UNCXA6NJT0 531 aa30.13■■■□□ 2.41
HLA-C-209ENST00000495835 SUPT20HL1Q3ZLR7 823 aa30.13■■■□□ 2.41
HLA-C-209ENST00000495835 PCDHAC2Q9Y5I4 1007 aa30.13■■■□□ 2.41
HLA-C-209ENST00000495835 UBE2Q2LH0YL09 131 aa30.12■■■□□ 2.41
HLA-C-209ENST00000495835 GNAI2P04899 355 aa30.12■■■□□ 2.41
HLA-C-209ENST00000495835 CRKP46108 304 aa30.12■■■□□ 2.41
HLA-C-209ENST00000495835 CHAF1AQ13111 956 aaPredicted RBP30.12■■■□□ 2.41
HLA-C-209ENST00000495835 ATP2B3Q16720 1220 aa30.12■■■□□ 2.41
HLA-C-209ENST00000495835 DZIP1LQ8IYY4 767 aaKnown RBP30.12■■■□□ 2.41
HLA-C-209ENST00000495835 WDR66Q8TBY9 1149 aa30.12■■■□□ 2.41
HLA-C-209ENST00000495835 MAST3O60307 1309 aa30.12■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms