RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 C15orf52Q6ZUT6 534 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 WDR63Q8IWG1 891 aa15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 HDAC9Q9UKV0 1011 aa15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 ANGEL1Q9UNK9 670 aaKnown RBP15.34■□□□□ 0.05
SHROOM1-206ENST00000495680 CLRN2A0PK11 232 aa15.33■□□□□ 0.04
SHROOM1-206ENST00000495680 DLGAP5Q15398 846 aa15.33■□□□□ 0.04
SHROOM1-206ENST00000495680 DEFB129Q9H1M3 183 aa15.33■□□□□ 0.04
SHROOM1-206ENST00000495680 HPS5Q9UPZ3 1129 aa15.33■□□□□ 0.04
SHROOM1-206ENST00000495680 ECM29Q5VYK3 1845 aa15.33■□□□□ 0.04
SHROOM1-206ENST00000495680 GPR25O00155 361 aa15.32■□□□□ 0.04
SHROOM1-206ENST00000495680 PLIN1O60240 522 aa15.32■□□□□ 0.04
SHROOM1-206ENST00000495680 IL1R1P14778 569 aa15.32■□□□□ 0.04
SHROOM1-206ENST00000495680 CFAP100Q494V2 611 aa15.32■□□□□ 0.04
SHROOM1-206ENST00000495680 SPRYD7Q5W111 196 aa15.32■□□□□ 0.04
SHROOM1-206ENST00000495680 ARMC9Q7Z3E5 817 aa15.32■□□□□ 0.04
SHROOM1-206ENST00000495680 CLMNQ96JQ2 1002 aa15.32■□□□□ 0.04
SHROOM1-206ENST00000495680 PRMT6Q96LA8 375 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-206ENST00000495680 GRM8O00222 908 aa15.31■□□□□ 0.04
SHROOM1-206ENST00000495680 MMP14P50281 582 aa15.31■□□□□ 0.04
SHROOM1-206ENST00000495680 MTMR14Q8NCE2 650 aa15.31■□□□□ 0.04
SHROOM1-206ENST00000495680 SPDYE2BA6NHP3 402 aa15.3■□□□□ 0.04
SHROOM1-206ENST00000495680 COL1A1P02452 1464 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-206ENST00000495680 SPDYE6P0CI01 402 aa15.3■□□□□ 0.04
SHROOM1-206ENST00000495680 LDHAL6AQ6ZMR3 332 aa15.3■□□□□ 0.04
SHROOM1-206ENST00000495680 ZNF804AQ7Z570 1209 aa15.3■□□□□ 0.04
SHROOM1-206ENST00000495680 KAZALD1Q96I82 304 aa15.3■□□□□ 0.04
SHROOM1-206ENST00000495680 SREBF2Q12772 1141 aa15.29■□□□□ 0.04
SHROOM1-206ENST00000495680 CCDC57Q2TAC2 916 aa15.29■□□□□ 0.04
SHROOM1-206ENST00000495680 NBPF12Q5TAG4 269 aaPredicted RBP15.29■□□□□ 0.04
SHROOM1-206ENST00000495680 SLC4A10Q6U841 1118 aa15.29■□□□□ 0.04
SHROOM1-206ENST00000495680 SUCLG2Q96I99 432 aa15.29■□□□□ 0.04
SHROOM1-206ENST00000495680 PUS3Q9BZE2 481 aaKnown RBP15.29■□□□□ 0.04
SHROOM1-206ENST00000495680 VEZTQ9HBM0 779 aa15.29■□□□□ 0.04
SHROOM1-206ENST00000495680 CNNM1Q9NRU3 951 aa15.29■□□□□ 0.04
SHROOM1-206ENST00000495680 GYG1P46976 350 aa15.28■□□□□ 0.04
SHROOM1-206ENST00000495680 FKBP1AP62942 108 aaKnown RBP15.28■□□□□ 0.04
SHROOM1-206ENST00000495680 MAP3K11Q16584 847 aa15.28■□□□□ 0.04
SHROOM1-206ENST00000495680 TAF7LQ5H9L4 462 aa15.28■□□□□ 0.04
SHROOM1-206ENST00000495680 CDAN1Q8IWY9 1227 aa15.28■□□□□ 0.04
SHROOM1-206ENST00000495680 WNK4Q96J92 1243 aa15.28■□□□□ 0.04
SHROOM1-206ENST00000495680 IGF2BP3O00425 579 aaKnown RBP eCLIP15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 ANP32CO43423 234 aa15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 NBPF7P0C2Y1 421 aaPredicted RBP15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 GJA5P36382 358 aa15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 GRIK5Q16478 980 aa15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 NOM1Q5C9Z4 860 aaKnown RBP15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 TDRD7Q8NHU6 1098 aaKnown RBP15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 SLC10A4Q96EP9 437 aa15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 CFHR5Q9BXR6 569 aa15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 C9orf78Q9NZ63 289 aaPredicted RBP15.27■□□□□ 0.04
SHROOM1-206ENST00000495680 OTOFQ9HC10 1997 aa15.27■□□□□ 0.03
SHROOM1-206ENST00000495680 LAMB1P07942 1786 aa15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 FAM205AQ6ZU69 1335 aa15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 FKTNO75072 461 aa15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 USP2O75604 605 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 ALDH1L1O75891 902 aa15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 RBM5P52756 815 aaKnown RBP eCLIP15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 RASA3Q14644 834 aa15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 PKN2Q16513 984 aaKnown RBP15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 IFNL1Q8IU54 200 aa15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 FAM9BQ8IZU0 186 aa15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 FAM84BQ96KN1 310 aaPredicted RBP15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 PPP2R3BQ9Y5P8 575 aa15.26■□□□□ 0.03
SHROOM1-206ENST00000495680 MANSC4A6NHS7 340 aaPredicted RBP15.25■□□□□ 0.03
SHROOM1-206ENST00000495680 MYO1BO43795 1136 aa15.25■□□□□ 0.03
SHROOM1-206ENST00000495680 MFSD14BQ5SR56 506 aa15.25■□□□□ 0.03
SHROOM1-206ENST00000495680 FBXO46Q6PJ61 603 aaPredicted RBP15.25■□□□□ 0.03
SHROOM1-206ENST00000495680 SRCIN1Q9C0H9 1055 aa15.25■□□□□ 0.03
SHROOM1-206ENST00000495680 ARAP2Q8WZ64 1704 aa15.25■□□□□ 0.03
SHROOM1-206ENST00000495680 PPP1R12BO60237 982 aaPredicted RBP15.24■□□□□ 0.03
SHROOM1-206ENST00000495680 HIBADHP31937 336 aaKnown RBP15.24■□□□□ 0.03
SHROOM1-206ENST00000495680 SUPT20HL1Q3ZLR7 823 aa15.24■□□□□ 0.03
SHROOM1-206ENST00000495680 SPDYE2Q495Y8 402 aa15.24■□□□□ 0.03
SHROOM1-206ENST00000495680 TDRD3Q9H7E2 651 aaKnown RBP15.24■□□□□ 0.03
SHROOM1-206ENST00000495680 ZNF70Q9UC06 446 aaPredicted RBP15.24■□□□□ 0.03
SHROOM1-206ENST00000495680 TTF2Q9UNY4 1162 aaKnown RBP15.24■□□□□ 0.03
SHROOM1-206ENST00000495680 IQSEC3Q9UPP2 1182 aaPredicted RBP15.24■□□□□ 0.03
SHROOM1-206ENST00000495680 RIPOR2Q9Y4F9 1068 aa15.24■□□□□ 0.03
SHROOM1-206ENST00000495680 ZNF521Q96K83 1311 aa15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 ZBTB48P10074 688 aaPredicted RBP15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 CAP1Q01518 475 aa15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 UBE4AQ14139 1066 aa15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 LRRC24Q50LG9 513 aa15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 ANKRD44Q8N8A2 993 aa15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 TEPSINQ96N21 525 aa15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 PTPN18Q99952 460 aa15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 BICC1Q9H694 974 aaKnown RBP15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 HTTP42858 3142 aa15.23■□□□□ 0.03
SHROOM1-206ENST00000495680 UTYO14607 1347 aa15.22■□□□□ 0.03
SHROOM1-206ENST00000495680 ALDH1A1P00352 501 aa15.22■□□□□ 0.03
SHROOM1-206ENST00000495680 RABL6Q3YEC7 729 aaPredicted RBP15.22■□□□□ 0.03
SHROOM1-206ENST00000495680 KLHDC4Q8TBB5 520 aa15.22■□□□□ 0.03
SHROOM1-206ENST00000495680 ELP3Q9H9T3 547 aa15.22■□□□□ 0.03
SHROOM1-206ENST00000495680 ZNF316A6NFI3 1004 aaPredicted RBP15.21■□□□□ 0.03
SHROOM1-206ENST00000495680 TCP10L2B9ZVM9 353 aa15.21■□□□□ 0.03
SHROOM1-206ENST00000495680 CRKP46108 304 aa15.21■□□□□ 0.03
SHROOM1-206ENST00000495680 IREB2P48200 963 aaKnown RBP15.21■□□□□ 0.03
SHROOM1-206ENST00000495680 CRHR2Q13324 411 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms