RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SLC4A10Q6U841 1118 aa27.97■■■□□ 2.07
HDDC3-203ENST00000494993 SRCIN1Q9C0H9 1055 aa27.97■■■□□ 2.07
HDDC3-203ENST00000494993 ARAP2Q8WZ64 1704 aa27.96■■■□□ 2.07
HDDC3-203ENST00000494993 ARMC9Q7Z3E5 817 aa27.96■■■□□ 2.07
HDDC3-203ENST00000494993 MTMR14Q8NCE2 650 aa27.96■■■□□ 2.07
HDDC3-203ENST00000494993 CNNM1Q9NRU3 951 aa27.96■■■□□ 2.07
HDDC3-203ENST00000494993 PLIN1O60240 522 aa27.95■■■□□ 2.06
HDDC3-203ENST00000494993 FKBP1AP62942 108 aaKnown RBP27.95■■■□□ 2.06
HDDC3-203ENST00000494993 LAMB1P07942 1786 aa27.94■■■□□ 2.06
HDDC3-203ENST00000494993 PRKG1Q13976 671 aa27.94■■■□□ 2.06
HDDC3-203ENST00000494993 ZNF521Q96K83 1311 aa27.93■■■□□ 2.06
HDDC3-203ENST00000494993 F8W031 263 aaPredicted RBP27.93■■■□□ 2.06
HDDC3-203ENST00000494993 PTPN12Q05209 780 aaKnown RBP27.93■■■□□ 2.06
HDDC3-203ENST00000494993 CTU1Q7Z7A3 348 aaKnown RBP27.93■■■□□ 2.06
HDDC3-203ENST00000494993 DEFB129Q9H1M3 183 aa27.93■■■□□ 2.06
HDDC3-203ENST00000494993 PCDHAC2Q9Y5I4 1007 aa27.93■■■□□ 2.06
HDDC3-203ENST00000494993 TM4SF4P48230 202 aa27.92■■■□□ 2.06
HDDC3-203ENST00000494993 CFAP100Q494V2 611 aa27.92■■■□□ 2.06
HDDC3-203ENST00000494993 SUCLG2Q96I99 432 aa27.92■■■□□ 2.06
HDDC3-203ENST00000494993 ANGEL1Q9UNK9 670 aaKnown RBP27.92■■■□□ 2.06
HDDC3-203ENST00000494993 MKRN3Q13064 507 aaKnown RBP27.91■■■□□ 2.06
HDDC3-203ENST00000494993 LDLRAD1Q5T700 205 aa27.91■■■□□ 2.06
HDDC3-203ENST00000494993 KAZALD1Q96I82 304 aa27.91■■■□□ 2.06
HDDC3-203ENST00000494993 JAG2Q9Y219 1238 aa27.91■■■□□ 2.06
HDDC3-203ENST00000494993 PPP2R3BQ9Y5P8 575 aa27.91■■■□□ 2.06
HDDC3-203ENST00000494993 SSC5DA1L4H1 1573 aa27.9■■■□□ 2.06
HDDC3-203ENST00000494993 SPDYE2BA6NHP3 402 aa27.9■■■□□ 2.06
HDDC3-203ENST00000494993 TBC1D8O95759 1140 aa27.9■■■□□ 2.06
HDDC3-203ENST00000494993 SPDYE6P0CI01 402 aa27.9■■■□□ 2.06
HDDC3-203ENST00000494993 FAM205AQ6ZU69 1335 aa27.9■■■□□ 2.06
HDDC3-203ENST00000494993 MYO1BO43795 1136 aa27.89■■■□□ 2.06
HDDC3-203ENST00000494993 NBPF7P0C2Y1 421 aaPredicted RBP27.89■■■□□ 2.06
HDDC3-203ENST00000494993 SREBF2Q12772 1141 aa27.89■■■□□ 2.06
HDDC3-203ENST00000494993 UBE4AQ14139 1066 aa27.89■■■□□ 2.06
HDDC3-203ENST00000494993 UTYO14607 1347 aa27.89■■■□□ 2.05
HDDC3-203ENST00000494993 PRMT6Q96LA8 375 aaPredicted RBP27.88■■■□□ 2.05
HDDC3-203ENST00000494993 PUS3Q9BZE2 481 aaKnown RBP27.88■■■□□ 2.05
HDDC3-203ENST00000494993 FZD1Q9UP38 647 aa27.88■■■□□ 2.05
HDDC3-203ENST00000494993 CLRN2A0PK11 232 aa27.87■■■□□ 2.05
HDDC3-203ENST00000494993 MAP3K11Q16584 847 aa27.87■■■□□ 2.05
HDDC3-203ENST00000494993 SPRYD7Q5W111 196 aa27.87■■■□□ 2.05
HDDC3-203ENST00000494993 TDRD7Q8NHU6 1098 aaKnown RBP27.87■■■□□ 2.05
HDDC3-203ENST00000494993 ZNF296Q8WUU4 475 aaPredicted RBP27.87■■■□□ 2.05
HDDC3-203ENST00000494993 GYG1P46976 350 aa27.86■■■□□ 2.05
HDDC3-203ENST00000494993 MRPL50Q8N5N7 158 aaKnown RBP27.86■■■□□ 2.05
HDDC3-203ENST00000494993 AOX1Q06278 1338 aa27.86■■■□□ 2.05
HDDC3-203ENST00000494993 OTOFQ9HC10 1997 aa27.86■■■□□ 2.05
HDDC3-203ENST00000494993 HIBADHP31937 336 aaKnown RBP27.85■■■□□ 2.05
HDDC3-203ENST00000494993 NOM1Q5C9Z4 860 aaKnown RBP27.85■■■□□ 2.05
HDDC3-203ENST00000494993 FAM84BQ96KN1 310 aaPredicted RBP27.85■■■□□ 2.05
HDDC3-203ENST00000494993 VEZTQ9HBM0 779 aa27.85■■■□□ 2.05
HDDC3-203ENST00000494993 PPP1R12BO60237 982 aaPredicted RBP27.84■■■□□ 2.05
HDDC3-203ENST00000494993 RBM5P52756 815 aaKnown RBP eCLIP27.84■■■□□ 2.05
HDDC3-203ENST00000494993 RABL6Q3YEC7 729 aaPredicted RBP27.84■■■□□ 2.05
HDDC3-203ENST00000494993 MFSD14BQ5SR56 506 aa27.84■■■□□ 2.05
HDDC3-203ENST00000494993 BICC1Q9H694 974 aaKnown RBP27.84■■■□□ 2.05
HDDC3-203ENST00000494993 RIPOR2Q9Y4F9 1068 aa27.84■■■□□ 2.05
HDDC3-203ENST00000494993 MROH5Q6ZUA9 1318 aa27.84■■■□□ 2.05
HDDC3-203ENST00000494993 TNRC18O15417 2968 aaPredicted RBP27.83■■■□□ 2.05
HDDC3-203ENST00000494993 GPR25O00155 361 aa27.83■■■□□ 2.05
HDDC3-203ENST00000494993 SUPT20HL1Q3ZLR7 823 aa27.83■■■□□ 2.05
HDDC3-203ENST00000494993 SLC10A4Q96EP9 437 aa27.83■■■□□ 2.05
HDDC3-203ENST00000494993 CFHR5Q9BXR6 569 aa27.83■■■□□ 2.05
HDDC3-203ENST00000494993 PDE4DIPQ5VU43 2346 aa27.83■■■□□ 2.04
HDDC3-203ENST00000494993 PKN2Q16513 984 aaKnown RBP27.82■■■□□ 2.04
HDDC3-203ENST00000494993 PTPRCP08575 1304 aa27.82■■■□□ 2.04
HDDC3-203ENST00000494993 MYH13Q9UKX3 1938 aa27.82■■■□□ 2.04
HDDC3-203ENST00000494993 SOX10P56693 466 aa27.81■■■□□ 2.04
HDDC3-203ENST00000494993 NBPF12Q5TAG4 269 aaPredicted RBP27.81■■■□□ 2.04
HDDC3-203ENST00000494993 ANKRD44Q8N8A2 993 aa27.81■■■□□ 2.04
HDDC3-203ENST00000494993 CLMNQ96JQ2 1002 aa27.81■■■□□ 2.04
HDDC3-203ENST00000494993 SERPINA10Q9UK55 444 aa27.81■■■□□ 2.04
HDDC3-203ENST00000494993 TTF2Q9UNY4 1162 aaKnown RBP27.81■■■□□ 2.04
HDDC3-203ENST00000494993 MANSC4A6NHS7 340 aaPredicted RBP27.8■■■□□ 2.04
HDDC3-203ENST00000494993 UNCXA6NJT0 531 aa27.8■■■□□ 2.04
HDDC3-203ENST00000494993 ZBTB48P10074 688 aaPredicted RBP27.8■■■□□ 2.04
HDDC3-203ENST00000494993 RASA3Q14644 834 aa27.8■■■□□ 2.04
HDDC3-203ENST00000494993 WNK4Q96J92 1243 aa27.8■■■□□ 2.04
HDDC3-203ENST00000494993 HPS5Q9UPZ3 1129 aa27.8■■■□□ 2.04
HDDC3-203ENST00000494993 E9PSI1 815 aa27.79■■■□□ 2.04
HDDC3-203ENST00000494993 SPDYE2Q495Y8 402 aa27.79■■■□□ 2.04
HDDC3-203ENST00000494993 LRRC24Q50LG9 513 aa27.79■■■□□ 2.04
HDDC3-203ENST00000494993 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.79■■■□□ 2.04
HDDC3-203ENST00000494993 ALDH1A1P00352 501 aa27.78■■■□□ 2.04
HDDC3-203ENST00000494993 INHBEP58166 350 aa27.78■■■□□ 2.04
HDDC3-203ENST00000494993 TNFAIP1Q13829 316 aa27.78■■■□□ 2.04
HDDC3-203ENST00000494993 METTL24Q5JXM2 366 aa27.78■■■□□ 2.04
HDDC3-203ENST00000494993 SSH1Q8WYL5 1049 aa27.78■■■□□ 2.04
HDDC3-203ENST00000494993 R3HDMLQ9H3Y0 253 aa27.78■■■□□ 2.04
HDDC3-203ENST00000494993 ZNF70Q9UC06 446 aaPredicted RBP27.78■■■□□ 2.04
HDDC3-203ENST00000494993 FKTNO75072 461 aa27.77■■■□□ 2.04
HDDC3-203ENST00000494993 IREB2P48200 963 aaKnown RBP27.77■■■□□ 2.04
HDDC3-203ENST00000494993 FBXO33Q7Z6M2 555 aa27.77■■■□□ 2.04
HDDC3-203ENST00000494993 TDRD3Q9H7E2 651 aaKnown RBP27.77■■■□□ 2.04
HDDC3-203ENST00000494993 USP2O75604 605 aaPredicted RBP27.76■■■□□ 2.03
HDDC3-203ENST00000494993 VPS37DQ86XT2 251 aa27.76■■■□□ 2.03
HDDC3-203ENST00000494993 IFNL1Q8IU54 200 aa27.76■■■□□ 2.03
HDDC3-203ENST00000494993 VGLL2Q8N8G2 317 aa27.76■■■□□ 2.03
HDDC3-203ENST00000494993 CRKP46108 304 aa27.75■■■□□ 2.03
HDDC3-203ENST00000494993 DZIP1LQ8IYY4 767 aaKnown RBP27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms