RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 FBXO33Q7Z6M2 555 aa19.55■□□□□ 0.72
LIMS2-216ENST00000494613 CDCA5Q96FF9 252 aa19.55■□□□□ 0.72
LIMS2-216ENST00000494613 JAG2Q9Y219 1238 aa19.55■□□□□ 0.72
LIMS2-216ENST00000494613 PSME4Q14997 1843 aa19.54■□□□□ 0.72
LIMS2-216ENST00000494613 IPO8O15397 1037 aaKnown RBP19.54■□□□□ 0.72
LIMS2-216ENST00000494613 PTPN12Q05209 780 aaKnown RBP19.54■□□□□ 0.72
LIMS2-216ENST00000494613 INTS3Q68E01 1043 aaKnown RBP19.54■□□□□ 0.72
LIMS2-216ENST00000494613 VGLL2Q8N8G2 317 aa19.54■□□□□ 0.72
LIMS2-216ENST00000494613 ZBED3Q96IU2 234 aaPredicted RBP19.54■□□□□ 0.72
LIMS2-216ENST00000494613 HDAC5Q9UQL6 1122 aa19.54■□□□□ 0.72
LIMS2-216ENST00000494613 F8W031 263 aaPredicted RBP19.53■□□□□ 0.72
LIMS2-216ENST00000494613 CTCFP49711 727 aaPredicted RBP19.53■□□□□ 0.72
LIMS2-216ENST00000494613 FAM205AQ6ZU69 1335 aa19.52■□□□□ 0.72
LIMS2-216ENST00000494613 EYA2O00167 538 aa19.52■□□□□ 0.72
LIMS2-216ENST00000494613 DLGAP5Q15398 846 aa19.52■□□□□ 0.72
LIMS2-216ENST00000494613 RGMBQ6NW40 437 aa19.52■□□□□ 0.72
LIMS2-216ENST00000494613 FRAT1Q92837 279 aaPredicted RBP19.52■□□□□ 0.72
LIMS2-216ENST00000494613 KIF16BQ96L93 1317 aa19.51■□□□□ 0.71
LIMS2-216ENST00000494613 LBX1P52954 281 aa19.51■□□□□ 0.71
LIMS2-216ENST00000494613 CAVIN4Q5BKX8 364 aa19.51■□□□□ 0.71
LIMS2-216ENST00000494613 ATG9AQ7Z3C6 839 aa19.51■□□□□ 0.71
LIMS2-216ENST00000494613 VPS37DQ86XT2 251 aa19.51■□□□□ 0.71
LIMS2-216ENST00000494613 MTMR14Q8NCE2 650 aa19.51■□□□□ 0.71
LIMS2-216ENST00000494613 MEIS3Q99687 375 aa19.51■□□□□ 0.71
LIMS2-216ENST00000494613 PCDHAC2Q9Y5I4 1007 aa19.51■□□□□ 0.71
LIMS2-216ENST00000494613 LRRFIP2Q9Y608 721 aaKnown RBP19.51■□□□□ 0.71
LIMS2-216ENST00000494613 FGFR2P21802 821 aa19.5■□□□□ 0.71
LIMS2-216ENST00000494613 BCAMP50895 628 aa19.5■□□□□ 0.71
LIMS2-216ENST00000494613 CCDC102AQ96A19 550 aa19.5■□□□□ 0.71
LIMS2-216ENST00000494613 PRMT6Q96LA8 375 aaPredicted RBP19.5■□□□□ 0.71
LIMS2-216ENST00000494613 ZIC5Q96T25 663 aa19.5■□□□□ 0.71
LIMS2-216ENST00000494613 BEGAINQ9BUH8 593 aa19.5■□□□□ 0.71
LIMS2-216ENST00000494613 PRDM10Q9NQV6 1147 aa19.5■□□□□ 0.71
LIMS2-216ENST00000494613 IQSEC3Q9UPP2 1182 aaPredicted RBP19.5■□□□□ 0.71
LIMS2-216ENST00000494613 TNNQ9UQP3 1299 aa19.5■□□□□ 0.71
LIMS2-216ENST00000494613 TRIM27P14373 513 aa19.49■□□□□ 0.71
LIMS2-216ENST00000494613 ZNF157P51786 506 aaPredicted RBP19.49■□□□□ 0.71
LIMS2-216ENST00000494613 CFAP100Q494V2 611 aa19.49■□□□□ 0.71
LIMS2-216ENST00000494613 MFSD14BQ5SR56 506 aa19.49■□□□□ 0.71
LIMS2-216ENST00000494613 ATF7IPQ6VMQ6 1270 aa19.49■□□□□ 0.71
LIMS2-216ENST00000494613 TNS4Q8IZW8 715 aa19.49■□□□□ 0.71
LIMS2-216ENST00000494613 FAM155AB1AL88 458 aaPredicted RBP19.48■□□□□ 0.71
LIMS2-216ENST00000494613 GNAI3P08754 354 aa19.48■□□□□ 0.71
LIMS2-216ENST00000494613 IFIT1P09914 478 aaKnown RBP19.48■□□□□ 0.71
LIMS2-216ENST00000494613 FKBP1BP68106 108 aa19.48■□□□□ 0.71
LIMS2-216ENST00000494613 NOGQ13253 232 aa19.48■□□□□ 0.71
LIMS2-216ENST00000494613 MOB2Q70IA6 237 aa19.48■□□□□ 0.71
LIMS2-216ENST00000494613 CLUAP1Q96AJ1 413 aa19.48■□□□□ 0.71
LIMS2-216ENST00000494613 SIL1Q9H173 461 aa19.48■□□□□ 0.71
LIMS2-216ENST00000494613 FBXO3Q9UK99 471 aa19.48■□□□□ 0.71
LIMS2-216ENST00000494613 ZNF646O15015 1829 aaPredicted RBP19.47■□□□□ 0.71
LIMS2-216ENST00000494613 UBE2Q2LH0YL09 131 aa19.47■□□□□ 0.71
LIMS2-216ENST00000494613 FRAT2O75474 233 aaPredicted RBP19.47■□□□□ 0.71
LIMS2-216ENST00000494613 HSPA8P11142 646 aaKnown RBP19.47■□□□□ 0.71
LIMS2-216ENST00000494613 RBM5P52756 815 aaKnown RBP eCLIP19.47■□□□□ 0.71
LIMS2-216ENST00000494613 PUM3Q15397 648 aaKnown RBP19.47■□□□□ 0.71
LIMS2-216ENST00000494613 CEP126Q9P2H0 1117 aa19.47■□□□□ 0.71
LIMS2-216ENST00000494613 SPDYE2BA6NHP3 402 aa19.46■□□□□ 0.71
LIMS2-216ENST00000494613 CIAO1O76071 339 aa19.46■□□□□ 0.71
LIMS2-216ENST00000494613 SPDYE6P0CI01 402 aa19.46■□□□□ 0.71
LIMS2-216ENST00000494613 CHAF1AQ13111 956 aaPredicted RBP19.46■□□□□ 0.71
LIMS2-216ENST00000494613 APOBEC3FQ8IUX4 373 aaKnown RBP19.46■□□□□ 0.71
LIMS2-216ENST00000494613 LPIN2Q92539 896 aa19.46■□□□□ 0.71
LIMS2-216ENST00000494613 DEFB129Q9H1M3 183 aa19.46■□□□□ 0.71
LIMS2-216ENST00000494613 TTF2Q9UNY4 1162 aaKnown RBP19.46■□□□□ 0.71
LIMS2-216ENST00000494613 PA2G4Q9UQ80 394 aaKnown RBP19.46■□□□□ 0.71
LIMS2-216ENST00000494613 MYO1BO43795 1136 aa19.45■□□□□ 0.7
LIMS2-216ENST00000494613 KIF23Q02241 960 aaPredicted RBP19.45■□□□□ 0.7
LIMS2-216ENST00000494613 GRIK5Q16478 980 aa19.45■□□□□ 0.7
LIMS2-216ENST00000494613 COPRSQ9NQ92 184 aa19.45■□□□□ 0.7
LIMS2-216ENST00000494613 A0A1B0GUL6 1792 aa19.44■□□□□ 0.7
LIMS2-216ENST00000494613 CLRN2A0PK11 232 aa19.44■□□□□ 0.7
LIMS2-216ENST00000494613 SLC5A1P13866 664 aa19.44■□□□□ 0.7
LIMS2-216ENST00000494613 NF2P35240 595 aa19.44■□□□□ 0.7
LIMS2-216ENST00000494613 TTLL12Q14166 644 aaPredicted RBP19.44■□□□□ 0.7
LIMS2-216ENST00000494613 ZKSCAN2Q63HK3 967 aa19.44■□□□□ 0.7
LIMS2-216ENST00000494613 SERPINA10Q9UK55 444 aa19.44■□□□□ 0.7
LIMS2-216ENST00000494613 AOX1Q06278 1338 aa19.44■□□□□ 0.7
LIMS2-216ENST00000494613 IL15P40933 162 aaPredicted RBP19.43■□□□□ 0.7
LIMS2-216ENST00000494613 TBC1D22AQ8WUA7 517 aa19.43■□□□□ 0.7
LIMS2-216ENST00000494613 TSKSQ9UJT2 592 aa19.43■□□□□ 0.7
LIMS2-216ENST00000494613 SRGAP3O43295 1099 aa19.42■□□□□ 0.7
LIMS2-216ENST00000494613 SLC10A3P09131 477 aa19.42■□□□□ 0.7
LIMS2-216ENST00000494613 PRKG1Q13976 671 aa19.42■□□□□ 0.7
LIMS2-216ENST00000494613 DZIP1LQ8IYY4 767 aaKnown RBP19.42■□□□□ 0.7
LIMS2-216ENST00000494613 TMEM57Q8N5G2 664 aa19.42■□□□□ 0.7
LIMS2-216ENST00000494613 CSRNP1Q96S65 589 aa19.42■□□□□ 0.7
LIMS2-216ENST00000494613 MRIQ9BWK5 157 aa19.42■□□□□ 0.7
LIMS2-216ENST00000494613 TDRD3Q9H7E2 651 aaKnown RBP19.42■□□□□ 0.7
LIMS2-216ENST00000494613 CA12O43570 354 aa19.41■□□□□ 0.7
LIMS2-216ENST00000494613 GNAI2P04899 355 aa19.41■□□□□ 0.7
LIMS2-216ENST00000494613 CRKP46108 304 aa19.41■□□□□ 0.7
LIMS2-216ENST00000494613 MTX1Q13505 466 aa19.41■□□□□ 0.7
LIMS2-216ENST00000494613 ATP2B3Q16720 1220 aa19.41■□□□□ 0.7
LIMS2-216ENST00000494613 VEZTQ9HBM0 779 aa19.41■□□□□ 0.7
LIMS2-216ENST00000494613 ZNF70Q9UC06 446 aaPredicted RBP19.41■□□□□ 0.7
LIMS2-216ENST00000494613 TIMM10P62072 90 aa19.4■□□□□ 0.7
LIMS2-216ENST00000494613 HDLBPQ00341 1268 aaKnown RBP19.4■□□□□ 0.7
LIMS2-216ENST00000494613 ARMC9Q7Z3E5 817 aa19.4■□□□□ 0.7
LIMS2-216ENST00000494613 RASAL3Q86YV0 1011 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms