RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 RBM26Q5T8P6 1007 aaKnown RBP16.61■□□□□ 0.25
SAPCD1-211ENST00000494299 ANGEL2Q5VTE6 544 aaKnown RBP16.61■□□□□ 0.25
SAPCD1-211ENST00000494299 OGFOD1Q8N543 542 aa16.61■□□□□ 0.25
SAPCD1-211ENST00000494299 WBP1LQ9NX94 342 aa16.61■□□□□ 0.25
SAPCD1-211ENST00000494299 WDR33Q9C0J8 1336 aaKnown RBP16.61■□□□□ 0.25
SAPCD1-211ENST00000494299 GYG1P46976 350 aa16.6■□□□□ 0.25
SAPCD1-211ENST00000494299 METTL24Q5JXM2 366 aa16.6■□□□□ 0.25
SAPCD1-211ENST00000494299 PAPPA2Q9BXP8 1791 aa16.59■□□□□ 0.25
SAPCD1-211ENST00000494299 HSPA1AP0DMV8 641 aaKnown RBP16.59■□□□□ 0.25
SAPCD1-211ENST00000494299 HSPA1BP0DMV9 641 aaKnown RBP16.59■□□□□ 0.25
SAPCD1-211ENST00000494299 PUM3Q15397 648 aaKnown RBP16.59■□□□□ 0.25
SAPCD1-211ENST00000494299 ZKSCAN2Q63HK3 967 aa16.59■□□□□ 0.25
SAPCD1-211ENST00000494299 KIAA0825Q8IV33 1275 aa16.59■□□□□ 0.25
SAPCD1-211ENST00000494299 SULF1Q8IWU6 871 aa16.59■□□□□ 0.25
SAPCD1-211ENST00000494299 ABT1Q9ULW3 272 aaKnown RBP16.59■□□□□ 0.25
SAPCD1-211ENST00000494299 MYH13Q9UKX3 1938 aa16.58■□□□□ 0.25
SAPCD1-211ENST00000494299 CDCA5Q96FF9 252 aa16.58■□□□□ 0.24
SAPCD1-211ENST00000494299 CAPNS2Q96L46 248 aa16.58■□□□□ 0.24
SAPCD1-211ENST00000494299 COL1A1P02452 1464 aaPredicted RBP16.58■□□□□ 0.24
SAPCD1-211ENST00000494299 FAM155AB1AL88 458 aaPredicted RBP16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 MAP2K2P36507 400 aa16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 IL15P40933 162 aaPredicted RBP16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 ECE1P42892 770 aa16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 FKBP1BP68106 108 aa16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 TMEM57Q8N5G2 664 aa16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 LPIN2Q92539 896 aa16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 MRIQ9BWK5 157 aa16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 GBA2Q9HCG7 927 aaPredicted RBP16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 HDAC9Q9UKV0 1011 aa16.57■□□□□ 0.24
SAPCD1-211ENST00000494299 SPDYE2BA6NHP3 402 aa16.56■□□□□ 0.24
SAPCD1-211ENST00000494299 SPDYE6P0CI01 402 aa16.56■□□□□ 0.24
SAPCD1-211ENST00000494299 RLBP1P12271 317 aa16.56■□□□□ 0.24
SAPCD1-211ENST00000494299 BCAMP50895 628 aa16.56■□□□□ 0.24
SAPCD1-211ENST00000494299 CYP4F22Q6NT55 531 aa16.56■□□□□ 0.24
SAPCD1-211ENST00000494299 SERPINA10Q9UK55 444 aa16.56■□□□□ 0.24
SAPCD1-211ENST00000494299 AOX1Q06278 1338 aa16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 GNAI2P04899 355 aa16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 HDLBPQ00341 1268 aaKnown RBP16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 MFSD14BQ5SR56 506 aa16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 FRAT1Q92837 279 aaPredicted RBP16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 FBXW7Q969H0 707 aa16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 PA2G4Q9UQ80 394 aaKnown RBP16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 SUGT1Q9Y2Z0 365 aa16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 PCDHAC2Q9Y5I4 1007 aa16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 LAMB1P07942 1786 aa16.55■□□□□ 0.24
SAPCD1-211ENST00000494299 ZBTB7BO15156 539 aaPredicted RBP16.54■□□□□ 0.24
SAPCD1-211ENST00000494299 IFIT1P09914 478 aaKnown RBP16.54■□□□□ 0.24
SAPCD1-211ENST00000494299 MAP2K1Q02750 393 aaPredicted RBP16.54■□□□□ 0.24
SAPCD1-211ENST00000494299 GRIK5Q16478 980 aa16.54■□□□□ 0.24
SAPCD1-211ENST00000494299 CAVIN4Q5BKX8 364 aa16.54■□□□□ 0.24
SAPCD1-211ENST00000494299 APOBEC3FQ8IUX4 373 aaKnown RBP16.54■□□□□ 0.24
SAPCD1-211ENST00000494299 TBC1D22AQ8WUA7 517 aa16.54■□□□□ 0.24
SAPCD1-211ENST00000494299 CLUAP1Q96AJ1 413 aa16.54■□□□□ 0.24
SAPCD1-211ENST00000494299 PRMT6Q96LA8 375 aaPredicted RBP16.54■□□□□ 0.24
SAPCD1-211ENST00000494299 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 FOXN1O15353 648 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 SRGAP3O43295 1099 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 HUNKP57058 714 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 POLA2Q14181 598 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 DLGAP5Q15398 846 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 CFAP100Q494V2 611 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 DZIP1LQ8IYY4 767 aaKnown RBP16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 C2orf69Q8N8R5 385 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 CEP126Q9P2H0 1117 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 JAG2Q9Y219 1238 aa16.53■□□□□ 0.24
SAPCD1-211ENST00000494299 SSC5DA1L4H1 1573 aa16.52■□□□□ 0.24
SAPCD1-211ENST00000494299 SLC5A1P13866 664 aa16.52■□□□□ 0.24
SAPCD1-211ENST00000494299 ATP2B3Q16720 1220 aa16.52■□□□□ 0.24
SAPCD1-211ENST00000494299 RGMBQ6NW40 437 aa16.52■□□□□ 0.24
SAPCD1-211ENST00000494299 SSH3Q8TE77 659 aa16.52■□□□□ 0.24
SAPCD1-211ENST00000494299 SIL1Q9H173 461 aa16.52■□□□□ 0.24
SAPCD1-211ENST00000494299 ZNF408Q9H9D4 720 aa16.52■□□□□ 0.24
SAPCD1-211ENST00000494299 PPP2R3BQ9Y5P8 575 aa16.52■□□□□ 0.24
SAPCD1-211ENST00000494299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.52■□□□□ 0.24
SAPCD1-211ENST00000494299 PDS5AQ29RF7 1337 aaKnown RBP16.51■□□□□ 0.23
SAPCD1-211ENST00000494299 SALL1Q9NSC2 1324 aa16.51■□□□□ 0.23
SAPCD1-211ENST00000494299 NOGQ13253 232 aa16.51■□□□□ 0.23
SAPCD1-211ENST00000494299 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
SAPCD1-211ENST00000494299 COL13A1Q5TAT6 717 aaPredicted RBP16.51■□□□□ 0.23
SAPCD1-211ENST00000494299 PRDM10Q9NQV6 1147 aa16.51■□□□□ 0.23
SAPCD1-211ENST00000494299 SCAF8Q9UPN6 1271 aaKnown RBP16.51■□□□□ 0.23
SAPCD1-211ENST00000494299 SEMA3EO15041 775 aa16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 AOC2O75106 756 aa16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 SLC10A3P09131 477 aa16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 MAP3K11Q16584 847 aa16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 LDLRAD1Q5T700 205 aa16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 VPS37DQ86XT2 251 aa16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 CCDC102AQ96A19 550 aa16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 ZIC5Q96T25 663 aa16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 DEFB129Q9H1M3 183 aa16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 TTF2Q9UNY4 1162 aaKnown RBP16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 IQSEC3Q9UPP2 1182 aaPredicted RBP16.5■□□□□ 0.23
SAPCD1-211ENST00000494299 F8W031 263 aaPredicted RBP16.49■□□□□ 0.23
SAPCD1-211ENST00000494299 ATP8B2P98198 1209 aa16.49■□□□□ 0.23
SAPCD1-211ENST00000494299 PRAMEF18Q5VWM3 479 aa16.49■□□□□ 0.23
SAPCD1-211ENST00000494299 ZDHHC15Q96MV8 337 aa16.49■□□□□ 0.23
SAPCD1-211ENST00000494299 NOP58Q9Y2X3 529 aaKnown RBP16.49■□□□□ 0.23
SAPCD1-211ENST00000494299 PHKA1P46020 1223 aa16.48■□□□□ 0.23
SAPCD1-211ENST00000494299 CRKP46108 304 aa16.48■□□□□ 0.23
SAPCD1-211ENST00000494299 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms