RNA–Protein interactions for RNA: ENST00000493743.1

SEMA3F-209, Transcript of semaphorin 3F, humanhuman

TSL 3

Gene SEMA3F, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-209ENST00000493743 NOM1Q5C9Z4 860 aaKnown RBP9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 C15orf52Q6ZUT6 534 aaKnown RBP9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 WDR63Q8IWG1 891 aa9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 ZBED3Q96IU2 234 aaPredicted RBP9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 MRS2Q9HD23 443 aa9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 CD209Q9NNX6 404 aa9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 CHMP3Q9Y3E7 222 aa9.93□□□□□ -0.82
SEMA3F-209ENST00000493743 IRS2Q9Y4H2 1338 aa9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 TAF5LO75529 589 aa9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 TBC1D8O95759 1140 aa9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 SOX10P56693 466 aa9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 FOXO4P98177 505 aa9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 PTPN12Q05209 780 aaKnown RBP9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 EXOSC9Q06265 439 aaKnown RBP9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 MKRN3Q13064 507 aaKnown RBP9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 PRKG1Q13976 671 aa9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 DLGAP5Q15398 846 aa9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 PKN2Q16513 984 aaKnown RBP9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 ZNF804AQ7Z570 1209 aa9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 MTMR14Q8NCE2 650 aa9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 ZNF296Q8WUU4 475 aaPredicted RBP9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 RBBP6Q7Z6E9 1792 aaKnown RBP9.92□□□□□ -0.82
SEMA3F-209ENST00000493743 F6X3S4 739 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 MYO1BO43795 1136 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 IL1R1P14778 569 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 FKBP1AP62942 108 aaKnown RBP9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 CCDC57Q2TAC2 916 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 BEND3Q5T5X7 828 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 LDLRAD1Q5T700 205 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 CERS5Q8N5B7 392 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 HELBQ8NG08 1087 aaPredicted RBP9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 CFHR5Q9BXR6 569 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 DEFB129Q9H1M3 183 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 ANGEL1Q9UNK9 670 aaKnown RBP9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 PPP2R3BQ9Y5P8 575 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 SSC5DA1L4H1 1573 aa9.91□□□□□ -0.82
SEMA3F-209ENST00000493743 GPR25O00155 361 aa9.9□□□□□ -0.82
SEMA3F-209ENST00000493743 SNAP23O00161 211 aa9.9□□□□□ -0.82
SEMA3F-209ENST00000493743 GRM8O00222 908 aa9.9□□□□□ -0.82
SEMA3F-209ENST00000493743 MAP3K11Q16584 847 aa9.9□□□□□ -0.82
SEMA3F-209ENST00000493743 TAF7LQ5H9L4 462 aa9.9□□□□□ -0.82
SEMA3F-209ENST00000493743 SPRYD7Q5W111 196 aa9.9□□□□□ -0.82
SEMA3F-209ENST00000493743 LMBR1LQ6UX01 489 aa9.9□□□□□ -0.82
SEMA3F-209ENST00000493743 HPS5Q9UPZ3 1129 aa9.9□□□□□ -0.82
SEMA3F-209ENST00000493743 TNRC18O15417 2968 aaPredicted RBP9.9□□□□□ -0.83
SEMA3F-209ENST00000493743 SPDYE2BA6NHP3 402 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 MANSC4A6NHS7 340 aaPredicted RBP9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 F8W031 263 aaPredicted RBP9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 PPP1R12BO60237 982 aaPredicted RBP9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 FKTNO75072 461 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 ALDH1L1O75891 902 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 ALDH1A1P00352 501 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 SPDYE6P0CI01 402 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 ZBTB48P10074 688 aaPredicted RBP9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 CFAP100Q494V2 611 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 EPHA10Q5JZY3 1008 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 LDHAL6AQ6ZMR3 332 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 SLC10A4Q96EP9 437 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 ZNF594Q96JF6 807 aaPredicted RBP9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 CNNM1Q9NRU3 951 aa9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 C9orf78Q9NZ63 289 aaPredicted RBP9.89□□□□□ -0.83
SEMA3F-209ENST00000493743 CLRN2A0PK11 232 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 UNCXA6NJT0 531 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 PLIN1O60240 522 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 INHBEP58166 350 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 SUPT20HL1Q3ZLR7 823 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 FBXO46Q6PJ61 603 aaPredicted RBP9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 WNK4Q96J92 1243 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 PRMT6Q96LA8 375 aaPredicted RBP9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 SRCIN1Q9C0H9 1055 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 VEZTQ9HBM0 779 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 FZD1Q9UP38 647 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 PCDHAC2Q9Y5I4 1007 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 AK9Q5TCS8 1911 aa9.88□□□□□ -0.83
SEMA3F-209ENST00000493743 FAM205AQ6ZU69 1335 aa9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 IREB2P48200 963 aaKnown RBP9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 RBM5P52756 815 aaKnown RBP eCLIP9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 UBE4AQ14139 1066 aa9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 SLC4A10Q6U841 1118 aa9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 IFNL1Q8IU54 200 aa9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 CLMNQ96JQ2 1002 aa9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 R3HDMLQ9H3Y0 253 aa9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 SPINK5Q9NQ38 1064 aaPredicted RBP9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 JAG2Q9Y219 1238 aa9.87□□□□□ -0.83
SEMA3F-209ENST00000493743 AOX1Q06278 1338 aa9.86□□□□□ -0.83
SEMA3F-209ENST00000493743 TNFAIP1Q13829 316 aa9.86□□□□□ -0.83
SEMA3F-209ENST00000493743 MFSD14BQ5SR56 506 aa9.86□□□□□ -0.83
SEMA3F-209ENST00000493743 NBPF12Q5TAG4 269 aaPredicted RBP9.86□□□□□ -0.83
SEMA3F-209ENST00000493743 TDRD7Q8NHU6 1098 aaKnown RBP9.86□□□□□ -0.83
SEMA3F-209ENST00000493743 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.86□□□□□ -0.83
SEMA3F-209ENST00000493743 TTF2Q9UNY4 1162 aaKnown RBP9.86□□□□□ -0.83
SEMA3F-209ENST00000493743 IGF2BP3O00425 579 aaKnown RBP eCLIP9.85□□□□□ -0.83
SEMA3F-209ENST00000493743 HIBADHP31937 336 aaKnown RBP9.85□□□□□ -0.83
SEMA3F-209ENST00000493743 GYG1P46976 350 aa9.85□□□□□ -0.83
SEMA3F-209ENST00000493743 RASA3Q14644 834 aa9.85□□□□□ -0.83
SEMA3F-209ENST00000493743 SPDYE2Q495Y8 402 aa9.85□□□□□ -0.83
SEMA3F-209ENST00000493743 ANKRD13AQ8IZ07 590 aa9.85□□□□□ -0.83
SEMA3F-209ENST00000493743 KAZALD1Q96I82 304 aa9.85□□□□□ -0.83
SEMA3F-209ENST00000493743 SUCLG2Q96I99 432 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms