RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 CERS5Q8N5B7 392 aa13.02□□□□□ -0.33
NUDCD3-210ENST00000493613 ZBED3Q96IU2 234 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-210ENST00000493613 ZNF594Q96JF6 807 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-210ENST00000493613 C9orf78Q9NZ63 289 aaPredicted RBP13.02□□□□□ -0.33
NUDCD3-210ENST00000493613 PLIN1O60240 522 aa13.01□□□□□ -0.33
NUDCD3-210ENST00000493613 IL1R1P14778 569 aa13.01□□□□□ -0.33
NUDCD3-210ENST00000493613 SLC4A10Q6U841 1118 aa13.01□□□□□ -0.33
NUDCD3-210ENST00000493613 ARMC9Q7Z3E5 817 aa13.01□□□□□ -0.33
NUDCD3-210ENST00000493613 CNNM1Q9NRU3 951 aa13.01□□□□□ -0.33
NUDCD3-210ENST00000493613 SSC5DA1L4H1 1573 aa13□□□□□ -0.33
NUDCD3-210ENST00000493613 F8W031 263 aaPredicted RBP13□□□□□ -0.33
NUDCD3-210ENST00000493613 ALDH1L1O75891 902 aa13□□□□□ -0.33
NUDCD3-210ENST00000493613 TBC1D8O95759 1140 aa13□□□□□ -0.33
NUDCD3-210ENST00000493613 PTPN12Q05209 780 aaKnown RBP13□□□□□ -0.33
NUDCD3-210ENST00000493613 MKRN3Q13064 507 aaKnown RBP13□□□□□ -0.33
NUDCD3-210ENST00000493613 CTU1Q7Z7A3 348 aaKnown RBP13□□□□□ -0.33
NUDCD3-210ENST00000493613 MTMR14Q8NCE2 650 aa13□□□□□ -0.33
NUDCD3-210ENST00000493613 SRCIN1Q9C0H9 1055 aa13□□□□□ -0.33
NUDCD3-210ENST00000493613 ANGEL1Q9UNK9 670 aaKnown RBP13□□□□□ -0.33
NUDCD3-210ENST00000493613 MYO1BO43795 1136 aa12.99□□□□□ -0.33
NUDCD3-210ENST00000493613 TM4SF4P48230 202 aa12.99□□□□□ -0.33
NUDCD3-210ENST00000493613 FKBP1AP62942 108 aaKnown RBP12.99□□□□□ -0.33
NUDCD3-210ENST00000493613 SREBF2Q12772 1141 aa12.99□□□□□ -0.33
NUDCD3-210ENST00000493613 DEFB129Q9H1M3 183 aa12.99□□□□□ -0.33
NUDCD3-210ENST00000493613 FZD1Q9UP38 647 aa12.99□□□□□ -0.33
NUDCD3-210ENST00000493613 JAG2Q9Y219 1238 aa12.99□□□□□ -0.33
NUDCD3-210ENST00000493613 PCDHAC2Q9Y5I4 1007 aa12.99□□□□□ -0.33
NUDCD3-210ENST00000493613 SPDYE2BA6NHP3 402 aa12.98□□□□□ -0.33
NUDCD3-210ENST00000493613 SPDYE6P0CI01 402 aa12.98□□□□□ -0.33
NUDCD3-210ENST00000493613 CFAP100Q494V2 611 aa12.98□□□□□ -0.33
NUDCD3-210ENST00000493613 LDLRAD1Q5T700 205 aa12.98□□□□□ -0.33
NUDCD3-210ENST00000493613 ZNF296Q8WUU4 475 aaPredicted RBP12.98□□□□□ -0.33
NUDCD3-210ENST00000493613 PPP2R3BQ9Y5P8 575 aa12.98□□□□□ -0.33
NUDCD3-210ENST00000493613 CENPFP49454 3210 aa12.98□□□□□ -0.33
NUDCD3-210ENST00000493613 CLRN2A0PK11 232 aa12.97□□□□□ -0.33
NUDCD3-210ENST00000493613 NBPF7P0C2Y1 421 aaPredicted RBP12.97□□□□□ -0.33
NUDCD3-210ENST00000493613 RBM5P52756 815 aaKnown RBP eCLIP12.97□□□□□ -0.33
NUDCD3-210ENST00000493613 SOX10P56693 466 aa12.97□□□□□ -0.33
NUDCD3-210ENST00000493613 SPRYD7Q5W111 196 aa12.97□□□□□ -0.33
NUDCD3-210ENST00000493613 SUCLG2Q96I99 432 aa12.97□□□□□ -0.33
NUDCD3-210ENST00000493613 PRMT6Q96LA8 375 aaPredicted RBP12.97□□□□□ -0.33
NUDCD3-210ENST00000493613 VEZTQ9HBM0 779 aa12.97□□□□□ -0.33
NUDCD3-210ENST00000493613 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
NUDCD3-210ENST00000493613 HTTP42858 3142 aa12.96□□□□□ -0.33
NUDCD3-210ENST00000493613 AK9Q5TCS8 1911 aa12.96□□□□□ -0.33
NUDCD3-210ENST00000493613 FAM205AQ6ZU69 1335 aa12.96□□□□□ -0.33
NUDCD3-210ENST00000493613 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
NUDCD3-210ENST00000493613 GYG1P46976 350 aa12.96□□□□□ -0.33
NUDCD3-210ENST00000493613 UBE4AQ14139 1066 aa12.96□□□□□ -0.33
NUDCD3-210ENST00000493613 MAP3K11Q16584 847 aa12.96□□□□□ -0.33
NUDCD3-210ENST00000493613 KAZALD1Q96I82 304 aa12.96□□□□□ -0.33
NUDCD3-210ENST00000493613 PUS3Q9BZE2 481 aaKnown RBP12.96□□□□□ -0.33
NUDCD3-210ENST00000493613 RBBP6Q7Z6E9 1792 aaKnown RBP12.96□□□□□ -0.34
NUDCD3-210ENST00000493613 PDE4DIPQ5VU43 2346 aa12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 UTYO14607 1347 aa12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 AOX1Q06278 1338 aa12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 ZNF521Q96K83 1311 aa12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 GPR25O00155 361 aa12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 HIBADHP31937 336 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 PKN2Q16513 984 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 SUPT20HL1Q3ZLR7 823 aa12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 NOM1Q5C9Z4 860 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 MFSD14BQ5SR56 506 aa12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 TDRD7Q8NHU6 1098 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 SLC10A4Q96EP9 437 aa12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 BICC1Q9H694 974 aaKnown RBP12.95□□□□□ -0.34
NUDCD3-210ENST00000493613 MROH5Q6ZUA9 1318 aa12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 ALDH1A1P00352 501 aa12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 ZBTB48P10074 688 aaPredicted RBP12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 NBPF12Q5TAG4 269 aaPredicted RBP12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 CLMNQ96JQ2 1002 aa12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 FAM84BQ96KN1 310 aaPredicted RBP12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 CFHR5Q9BXR6 569 aa12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 SERPINA10Q9UK55 444 aa12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 TTF2Q9UNY4 1162 aaKnown RBP12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 RIPOR2Q9Y4F9 1068 aa12.94□□□□□ -0.34
NUDCD3-210ENST00000493613 MANSC4A6NHS7 340 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 FKTNO75072 461 aa12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 IREB2P48200 963 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 INHBEP58166 350 aa12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 TNFAIP1Q13829 316 aa12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 RASA3Q14644 834 aa12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 RABL6Q3YEC7 729 aaPredicted RBP12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 MRPL50Q8N5N7 158 aaKnown RBP12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 WNK4Q96J92 1243 aa12.93□□□□□ -0.34
NUDCD3-210ENST00000493613 PTPRCP08575 1304 aa12.92□□□□□ -0.34
NUDCD3-210ENST00000493613 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
NUDCD3-210ENST00000493613 VPS37DQ86XT2 251 aa12.92□□□□□ -0.34
NUDCD3-210ENST00000493613 IFNL1Q8IU54 200 aa12.92□□□□□ -0.34
NUDCD3-210ENST00000493613 R3HDMLQ9H3Y0 253 aa12.92□□□□□ -0.34
NUDCD3-210ENST00000493613 TDRD3Q9H7E2 651 aaKnown RBP12.92□□□□□ -0.34
NUDCD3-210ENST00000493613 ZNF70Q9UC06 446 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-210ENST00000493613 IQSEC3Q9UPP2 1182 aaPredicted RBP12.92□□□□□ -0.34
NUDCD3-210ENST00000493613 FRAT2O75474 233 aaPredicted RBP12.91□□□□□ -0.34
NUDCD3-210ENST00000493613 USP2O75604 605 aaPredicted RBP12.91□□□□□ -0.34
NUDCD3-210ENST00000493613 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
NUDCD3-210ENST00000493613 CAVIN4Q5BKX8 364 aa12.91□□□□□ -0.34
NUDCD3-210ENST00000493613 METTL24Q5JXM2 366 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms