RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 RGMBQ6NW40 437 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 TNS4Q8IZW8 715 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 CERS5Q8N5B7 392 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 FAM84BQ96KN1 310 aaPredicted RBP14.41□□□□□ -0.1
LRTM1-202ENST00000493075 BEGAINQ9BUH8 593 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 FAM205AQ6ZU69 1335 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 PDE8BO95263 885 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 LRRC24Q50LG9 513 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 FBXO33Q7Z6M2 555 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 MIER1Q8N108 512 aa14.41□□□□□ -0.1
LRTM1-202ENST00000493075 CA12O43570 354 aa14.4□□□□□ -0.1
LRTM1-202ENST00000493075 UBTFL1P0CB47 393 aaPredicted RBP14.4□□□□□ -0.1
LRTM1-202ENST00000493075 HSPA8P11142 646 aaKnown RBP14.4□□□□□ -0.1
LRTM1-202ENST00000493075 RFX5P48382 616 aaPredicted RBP14.4□□□□□ -0.1
LRTM1-202ENST00000493075 DLGAP5Q15398 846 aa14.4□□□□□ -0.1
LRTM1-202ENST00000493075 METTL24Q5JXM2 366 aa14.4□□□□□ -0.1
LRTM1-202ENST00000493075 VGLL2Q8N8G2 317 aa14.4□□□□□ -0.1
LRTM1-202ENST00000493075 TRPM7Q96QT4 1865 aa14.4□□□□□ -0.1
LRTM1-202ENST00000493075 FBXO3Q9UK99 471 aa14.4□□□□□ -0.1
LRTM1-202ENST00000493075 KIF16BQ96L93 1317 aa14.39□□□□□ -0.11
LRTM1-202ENST00000493075 PSME4Q14997 1843 aa14.39□□□□□ -0.11
LRTM1-202ENST00000493075 FAM155AB1AL88 458 aaPredicted RBP14.39□□□□□ -0.11
LRTM1-202ENST00000493075 IPO8O15397 1037 aaKnown RBP14.39□□□□□ -0.11
LRTM1-202ENST00000493075 GYG1P46976 350 aa14.39□□□□□ -0.11
LRTM1-202ENST00000493075 LBX1P52954 281 aa14.39□□□□□ -0.11
LRTM1-202ENST00000493075 INTS3Q68E01 1043 aaKnown RBP14.39□□□□□ -0.11
LRTM1-202ENST00000493075 APOBEC3FQ8IUX4 373 aaKnown RBP14.39□□□□□ -0.11
LRTM1-202ENST00000493075 EYA2O00167 538 aa14.38□□□□□ -0.11
LRTM1-202ENST00000493075 ZNF157P51786 506 aaPredicted RBP14.38□□□□□ -0.11
LRTM1-202ENST00000493075 PTPN12Q05209 780 aaKnown RBP14.38□□□□□ -0.11
LRTM1-202ENST00000493075 CAVIN4Q5BKX8 364 aa14.38□□□□□ -0.11
LRTM1-202ENST00000493075 FGFR2P21802 821 aa14.37□□□□□ -0.11
LRTM1-202ENST00000493075 NF2P35240 595 aa14.37□□□□□ -0.11
LRTM1-202ENST00000493075 VPS37DQ86XT2 251 aa14.37□□□□□ -0.11
LRTM1-202ENST00000493075 REM2Q8IYK8 340 aaPredicted RBP14.37□□□□□ -0.11
LRTM1-202ENST00000493075 KLHDC4Q8TBB5 520 aa14.37□□□□□ -0.11
LRTM1-202ENST00000493075 SPEF2Q9C093 1822 aa14.37□□□□□ -0.11
LRTM1-202ENST00000493075 THSD7BQ9C0I4 1608 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 MYO1BO43795 1136 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 CIAO1O76071 339 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 SLC10A3P09131 477 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 IFIT1P09914 478 aaKnown RBP14.36□□□□□ -0.11
LRTM1-202ENST00000493075 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 PUM3Q15397 648 aaKnown RBP14.36□□□□□ -0.11
LRTM1-202ENST00000493075 CFAP100Q494V2 611 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 MFSD14BQ5SR56 506 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 PRMT6Q96LA8 375 aaPredicted RBP14.36□□□□□ -0.11
LRTM1-202ENST00000493075 SERPINA10Q9UK55 444 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 PPP2R3BQ9Y5P8 575 aa14.36□□□□□ -0.11
LRTM1-202ENST00000493075 F8W031 263 aaPredicted RBP14.35□□□□□ -0.11
LRTM1-202ENST00000493075 GNAI3P08754 354 aa14.35□□□□□ -0.11
LRTM1-202ENST00000493075 KIF23Q02241 960 aaPredicted RBP14.35□□□□□ -0.11
LRTM1-202ENST00000493075 PRAMEF18Q5VWM3 479 aa14.35□□□□□ -0.11
LRTM1-202ENST00000493075 ATG9AQ7Z3C6 839 aa14.35□□□□□ -0.11
LRTM1-202ENST00000493075 TBC1D22AQ8WUA7 517 aa14.35□□□□□ -0.11
LRTM1-202ENST00000493075 LPIN2Q92539 896 aa14.35□□□□□ -0.11
LRTM1-202ENST00000493075 ZIC5Q96T25 663 aa14.35□□□□□ -0.11
LRTM1-202ENST00000493075 MRIQ9BWK5 157 aa14.35□□□□□ -0.11
LRTM1-202ENST00000493075 DEFB129Q9H1M3 183 aa14.35□□□□□ -0.11
LRTM1-202ENST00000493075 SCAF8Q9UPN6 1271 aaKnown RBP14.35□□□□□ -0.11
LRTM1-202ENST00000493075 JAG2Q9Y219 1238 aa14.35□□□□□ -0.11
LRTM1-202ENST00000493075 LRRFIP2Q9Y608 721 aaKnown RBP14.35□□□□□ -0.11
LRTM1-202ENST00000493075 HDLBPQ00341 1268 aaKnown RBP14.34□□□□□ -0.11
LRTM1-202ENST00000493075 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
LRTM1-202ENST00000493075 ATF7IPQ6VMQ6 1270 aa14.34□□□□□ -0.11
LRTM1-202ENST00000493075 MEIS3Q99687 375 aa14.34□□□□□ -0.11
LRTM1-202ENST00000493075 COPRSQ9NQ92 184 aa14.34□□□□□ -0.11
LRTM1-202ENST00000493075 TTF2Q9UNY4 1162 aaKnown RBP14.34□□□□□ -0.11
LRTM1-202ENST00000493075 COL1A1P02452 1464 aaPredicted RBP14.33□□□□□ -0.12
LRTM1-202ENST00000493075 UBE2Q2LH0YL09 131 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 FRAT2O75474 233 aaPredicted RBP14.33□□□□□ -0.12
LRTM1-202ENST00000493075 BCAR3O75815 825 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 SLC5A1P13866 664 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 TRIM27P14373 513 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 IL15P40933 162 aaPredicted RBP14.33□□□□□ -0.12
LRTM1-202ENST00000493075 BCAMP50895 628 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 ARMC9Q7Z3E5 817 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 RASAL3Q86YV0 1011 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 SAGE1Q9NXZ1 904 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 CEP126Q9P2H0 1117 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 SUGT1Q9Y2Z0 365 aa14.33□□□□□ -0.12
LRTM1-202ENST00000493075 ZNF646O15015 1829 aaPredicted RBP14.33□□□□□ -0.12
LRTM1-202ENST00000493075 UNCXA6NJT0 531 aa14.32□□□□□ -0.12
LRTM1-202ENST00000493075 ZBTB22O15209 634 aa14.32□□□□□ -0.12
LRTM1-202ENST00000493075 RBM5P52756 815 aaKnown RBP eCLIP14.32□□□□□ -0.12
LRTM1-202ENST00000493075 MTX1Q13505 466 aa14.32□□□□□ -0.12
LRTM1-202ENST00000493075 TTLL12Q14166 644 aaPredicted RBP14.32□□□□□ -0.12
LRTM1-202ENST00000493075 SUPT20HL1Q3ZLR7 823 aa14.32□□□□□ -0.12
LRTM1-202ENST00000493075 LDLRAD1Q5T700 205 aa14.32□□□□□ -0.12
LRTM1-202ENST00000493075 MOB2Q70IA6 237 aa14.32□□□□□ -0.12
LRTM1-202ENST00000493075 CSRNP1Q96S65 589 aa14.32□□□□□ -0.12
LRTM1-202ENST00000493075 PCDHAC2Q9Y5I4 1007 aa14.32□□□□□ -0.12
LRTM1-202ENST00000493075 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
LRTM1-202ENST00000493075 CRKP46108 304 aa14.31□□□□□ -0.12
LRTM1-202ENST00000493075 MAP3K11Q16584 847 aa14.31□□□□□ -0.12
LRTM1-202ENST00000493075 SPDYE2Q495Y8 402 aa14.31□□□□□ -0.12
LRTM1-202ENST00000493075 DZIP1LQ8IYY4 767 aaKnown RBP14.31□□□□□ -0.12
LRTM1-202ENST00000493075 FRAT1Q92837 279 aaPredicted RBP14.31□□□□□ -0.12
LRTM1-202ENST00000493075 IQSEC3Q9UPP2 1182 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms