RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 USP17L1Q7RTZ2 530 aa15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 OGFOD1Q8N543 542 aa15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 CELF1Q92879 486 aaKnown RBP15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 FZD1Q9UP38 647 aa15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 PPP2R3BQ9Y5P8 575 aa15.28■□□□□ 0.04
CACNA1C-228ENST00000492150 FAM205AQ6ZU69 1335 aa15.27■□□□□ 0.04
CACNA1C-228ENST00000492150 TLR2O60603 784 aa15.27■□□□□ 0.04
CACNA1C-228ENST00000492150 MAP3K12Q12852 859 aa15.27■□□□□ 0.04
CACNA1C-228ENST00000492150 SF3B3Q15393 1217 aaKnown RBP15.27■□□□□ 0.04
CACNA1C-228ENST00000492150 PODNQ7Z5L7 613 aa15.27■□□□□ 0.04
CACNA1C-228ENST00000492150 MAFAQ8NHW3 353 aaPredicted RBP15.27■□□□□ 0.04
CACNA1C-228ENST00000492150 SRRDQ9UH36 339 aa15.27■□□□□ 0.04
CACNA1C-228ENST00000492150 RIPOR2Q9Y4F9 1068 aa15.27■□□□□ 0.04
CACNA1C-228ENST00000492150 MYO3BQ8WXR4 1341 aa15.26■□□□□ 0.03
CACNA1C-228ENST00000492150 TMEM265A0A087WTH1 108 aa15.26■□□□□ 0.03
CACNA1C-228ENST00000492150 CHL1O00533 1208 aa15.26■□□□□ 0.03
CACNA1C-228ENST00000492150 ANKRD13AQ8IZ07 590 aa15.26■□□□□ 0.03
CACNA1C-228ENST00000492150 FAM89AQ96GI7 184 aa15.26■□□□□ 0.03
CACNA1C-228ENST00000492150 TRIM47Q96LD4 638 aa15.26■□□□□ 0.03
CACNA1C-228ENST00000492150 ISCA1Q9BUE6 129 aa15.26■□□□□ 0.03
CACNA1C-228ENST00000492150 ZCCHC17Q9NP64 241 aaKnown RBP15.26■□□□□ 0.03
CACNA1C-228ENST00000492150 CHPF2Q9P2E5 772 aa15.26■□□□□ 0.03
CACNA1C-228ENST00000492150 PIEZO1Q92508 2521 aa15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 WDHD1O75717 1129 aaPredicted RBP15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 HOXD10P28358 340 aa15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 MAGEA10P43363 369 aaPredicted RBP15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 IREB2P48200 963 aaKnown RBP15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 TJAP1Q5JTD0 557 aa15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 HELBQ8NG08 1087 aaPredicted RBP15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 PLBD2Q8NHP8 589 aa15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 BRI3BPQ8WY22 251 aa15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 DEFB129Q9H1M3 183 aa15.25■□□□□ 0.03
CACNA1C-228ENST00000492150 ATP5J2-PTCD1G3V325 749 aa15.24■□□□□ 0.03
CACNA1C-228ENST00000492150 UFL1O94874 794 aa15.24■□□□□ 0.03
CACNA1C-228ENST00000492150 LMOD3Q0VAK6 560 aa15.24■□□□□ 0.03
CACNA1C-228ENST00000492150 RAET1EQ8TD07 263 aa15.24■□□□□ 0.03
CACNA1C-228ENST00000492150 ZBED3Q96IU2 234 aaPredicted RBP15.24■□□□□ 0.03
CACNA1C-228ENST00000492150 NCOR1O75376 2440 aa15.23■□□□□ 0.03
CACNA1C-228ENST00000492150 SASH1O94885 1247 aa15.23■□□□□ 0.03
CACNA1C-228ENST00000492150 FAM43AQ8N2R8 423 aa15.23■□□□□ 0.03
CACNA1C-228ENST00000492150 OPTNQ96CV9 577 aa15.23■□□□□ 0.03
CACNA1C-228ENST00000492150 UBE2OQ9C0C9 1292 aaKnown RBP15.23■□□□□ 0.03
CACNA1C-228ENST00000492150 GGA1Q9UJY5 639 aa15.23■□□□□ 0.03
CACNA1C-228ENST00000492150 ZMYND8Q9ULU4 1186 aaPredicted RBP15.23■□□□□ 0.03
CACNA1C-228ENST00000492150 GTF2A2P52657 109 aa15.22■□□□□ 0.03
CACNA1C-228ENST00000492150 SUPT20HL1Q3ZLR7 823 aa15.22■□□□□ 0.03
CACNA1C-228ENST00000492150 RTL5Q5HYW3 569 aaPredicted RBP15.22■□□□□ 0.03
CACNA1C-228ENST00000492150 DACT2Q5SW24 774 aa15.22■□□□□ 0.03
CACNA1C-228ENST00000492150 ZNF697Q5TEC3 545 aa15.22■□□□□ 0.03
CACNA1C-228ENST00000492150 HDGFL1Q5TGJ6 251 aa15.22■□□□□ 0.03
CACNA1C-228ENST00000492150 C7orf61Q8IZ16 206 aa15.22■□□□□ 0.03
CACNA1C-228ENST00000492150 TRIM35Q9UPQ4 493 aa15.22■□□□□ 0.03
CACNA1C-228ENST00000492150 CCL15-CCL14A0A0B4J2E2 113 aa15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 IRS4O14654 1257 aaPredicted RBP15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 OSBPP22059 807 aa15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 RPS8P62241 208 aaKnown RBP15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 TRIM28Q13263 835 aaKnown RBP15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 NEUROD2Q15784 382 aa15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 CCL15Q16663 113 aa15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 NECAB2Q7Z6G3 386 aa15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 SLAIN1Q8ND83 568 aa15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 CDX2Q99626 313 aaPredicted RBP15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 CRISPLD2Q9H0B8 497 aa15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 UNC93B1Q9H1C4 597 aa15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 LAS1LQ9Y4W2 734 aaKnown RBP15.21■□□□□ 0.03
CACNA1C-228ENST00000492150 USP2O75604 605 aaPredicted RBP15.2■□□□□ 0.02
CACNA1C-228ENST00000492150 HOXB7P09629 217 aa15.2■□□□□ 0.02
CACNA1C-228ENST00000492150 CTGFP29279 349 aa15.2■□□□□ 0.02
CACNA1C-228ENST00000492150 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
CACNA1C-228ENST00000492150 CNKSR2Q8WXI2 1034 aa15.2■□□□□ 0.02
CACNA1C-228ENST00000492150 PAWRQ96IZ0 340 aaKnown RBP15.2■□□□□ 0.02
CACNA1C-228ENST00000492150 DBF4Q9UBU7 674 aaPredicted RBP15.2■□□□□ 0.02
CACNA1C-228ENST00000492150 MGAMO43451 1857 aa15.2■□□□□ 0.02
CACNA1C-228ENST00000492150 ZNF804BA4D1E1 1349 aa15.19■□□□□ 0.02
CACNA1C-228ENST00000492150 MYPNQ86TC9 1320 aa15.19■□□□□ 0.02
CACNA1C-228ENST00000492150 ADGRA2Q96PE1 1338 aa15.19■□□□□ 0.02
CACNA1C-228ENST00000492150 PSMC4P43686 418 aa15.19■□□□□ 0.02
CACNA1C-228ENST00000492150 FAM161BQ96MY7 647 aa15.19■□□□□ 0.02
CACNA1C-228ENST00000492150 SEC31BQ9NQW1 1179 aa15.19■□□□□ 0.02
CACNA1C-228ENST00000492150 ANKIB1Q9P2G1 1089 aa15.19■□□□□ 0.02
CACNA1C-228ENST00000492150 BIN2Q9UBW5 565 aaPredicted RBP15.19■□□□□ 0.02
CACNA1C-228ENST00000492150 CDH23Q9H251 3354 aa15.18■□□□□ 0.02
CACNA1C-228ENST00000492150 TFRCP02786 760 aaKnown RBP15.18■□□□□ 0.02
CACNA1C-228ENST00000492150 RALBP1Q15311 655 aa15.18■□□□□ 0.02
CACNA1C-228ENST00000492150 STRIP1Q5VSL9 837 aa15.18■□□□□ 0.02
CACNA1C-228ENST00000492150 C17orf99Q6UX52 265 aa15.18■□□□□ 0.02
CACNA1C-228ENST00000492150 ANKLE1Q8NAG6 615 aa15.18■□□□□ 0.02
CACNA1C-228ENST00000492150 PAK6Q9NQU5 681 aaPredicted RBP15.18■□□□□ 0.02
CACNA1C-228ENST00000492150 HYPKQ9NX55 129 aa15.18■□□□□ 0.02
CACNA1C-228ENST00000492150 ELP3Q9H9T3 547 aa15.17■□□□□ 0.02
CACNA1C-228ENST00000492150 SYN1P17600 705 aa15.16■□□□□ 0.02
CACNA1C-228ENST00000492150 DUSP27Q5VZP5 1158 aa15.16■□□□□ 0.02
CACNA1C-228ENST00000492150 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
CACNA1C-228ENST00000492150 RUNDC1Q96C34 613 aa15.16■□□□□ 0.02
CACNA1C-228ENST00000492150 MED23Q9ULK4 1368 aa15.15■□□□□ 0.02
CACNA1C-228ENST00000492150 MTMR14Q8NCE2 650 aa15.15■□□□□ 0.02
CACNA1C-228ENST00000492150 DEFB118Q96PH6 123 aa15.15■□□□□ 0.02
CACNA1C-228ENST00000492150 MXD3Q9BW11 206 aa15.15■□□□□ 0.02
CACNA1C-228ENST00000492150 XDHP47989 1333 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms