RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 SUCLG2Q96I99 432 aa13.91□□□□□ -0.18
TMEM39A-211ENST00000491685 ZBED3Q96IU2 234 aaPredicted RBP13.91□□□□□ -0.18
TMEM39A-211ENST00000491685 SAGE1Q9NXZ1 904 aa13.91□□□□□ -0.18
TMEM39A-211ENST00000491685 JAG2Q9Y219 1238 aa13.91□□□□□ -0.18
TMEM39A-211ENST00000491685 UBE2Q2LH0YL09 131 aa13.9□□□□□ -0.18
TMEM39A-211ENST00000491685 C15orf52Q6ZUT6 534 aaKnown RBP13.9□□□□□ -0.18
TMEM39A-211ENST00000491685 CSRNP1Q96S65 589 aa13.9□□□□□ -0.18
TMEM39A-211ENST00000491685 RNF186Q9NXI6 227 aa13.9□□□□□ -0.18
TMEM39A-211ENST00000491685 MYH13Q9UKX3 1938 aa13.9□□□□□ -0.18
TMEM39A-211ENST00000491685 PLIN1O60240 522 aa13.89□□□□□ -0.19
TMEM39A-211ENST00000491685 ALDH1L1O75891 902 aa13.89□□□□□ -0.19
TMEM39A-211ENST00000491685 NBPF7P0C2Y1 421 aaPredicted RBP13.89□□□□□ -0.19
TMEM39A-211ENST00000491685 ALDH1L2Q3SY69 923 aa13.89□□□□□ -0.19
TMEM39A-211ENST00000491685 PRPF38BQ5VTL8 546 aaKnown RBP13.89□□□□□ -0.19
TMEM39A-211ENST00000491685 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
TMEM39A-211ENST00000491685 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
TMEM39A-211ENST00000491685 PUS3Q9BZE2 481 aaKnown RBP13.89□□□□□ -0.19
TMEM39A-211ENST00000491685 FZD1Q9UP38 647 aa13.89□□□□□ -0.19
TMEM39A-211ENST00000491685 F8W031 263 aaPredicted RBP13.88□□□□□ -0.19
TMEM39A-211ENST00000491685 TRPA1O75762 1119 aa13.88□□□□□ -0.19
TMEM39A-211ENST00000491685 IL1R1P14778 569 aa13.88□□□□□ -0.19
TMEM39A-211ENST00000491685 SOX10P56693 466 aa13.88□□□□□ -0.19
TMEM39A-211ENST00000491685 FKBP1BP68106 108 aa13.88□□□□□ -0.19
TMEM39A-211ENST00000491685 LDHAL6AQ6ZMR3 332 aa13.88□□□□□ -0.19
TMEM39A-211ENST00000491685 SRCIN1Q9C0H9 1055 aa13.88□□□□□ -0.19
TMEM39A-211ENST00000491685 C9orf78Q9NZ63 289 aaPredicted RBP13.88□□□□□ -0.19
TMEM39A-211ENST00000491685 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
TMEM39A-211ENST00000491685 PRKG1Q13976 671 aa13.87□□□□□ -0.19
TMEM39A-211ENST00000491685 CCDC57Q2TAC2 916 aa13.87□□□□□ -0.19
TMEM39A-211ENST00000491685 TAF7LQ5H9L4 462 aa13.87□□□□□ -0.19
TMEM39A-211ENST00000491685 ANKRD44Q8N8A2 993 aa13.87□□□□□ -0.19
TMEM39A-211ENST00000491685 CNNM1Q9NRU3 951 aa13.87□□□□□ -0.19
TMEM39A-211ENST00000491685 HDAC9Q9UKV0 1011 aa13.87□□□□□ -0.19
TMEM39A-211ENST00000491685 UTYO14607 1347 aa13.87□□□□□ -0.19
TMEM39A-211ENST00000491685 IPO8O15397 1037 aaKnown RBP13.86□□□□□ -0.19
TMEM39A-211ENST00000491685 MKRN3Q13064 507 aaKnown RBP13.86□□□□□ -0.19
TMEM39A-211ENST00000491685 TTLL12Q14166 644 aaPredicted RBP13.86□□□□□ -0.19
TMEM39A-211ENST00000491685 ZNF804AQ7Z570 1209 aa13.86□□□□□ -0.19
TMEM39A-211ENST00000491685 BICC1Q9H694 974 aaKnown RBP13.86□□□□□ -0.19
TMEM39A-211ENST00000491685 CLRN2A0PK11 232 aa13.85□□□□□ -0.19
TMEM39A-211ENST00000491685 GYG1P46976 350 aa13.85□□□□□ -0.19
TMEM39A-211ENST00000491685 MMP14P50281 582 aa13.85□□□□□ -0.19
TMEM39A-211ENST00000491685 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
TMEM39A-211ENST00000491685 CFAP100Q494V2 611 aa13.85□□□□□ -0.19
TMEM39A-211ENST00000491685 APOBEC3FQ8IUX4 373 aaKnown RBP13.85□□□□□ -0.19
TMEM39A-211ENST00000491685 SSH1Q8WYL5 1049 aa13.85□□□□□ -0.19
TMEM39A-211ENST00000491685 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
TMEM39A-211ENST00000491685 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
TMEM39A-211ENST00000491685 DLGAP5Q15398 846 aa13.84□□□□□ -0.19
TMEM39A-211ENST00000491685 RABL6Q3YEC7 729 aaPredicted RBP13.84□□□□□ -0.19
TMEM39A-211ENST00000491685 LRRC24Q50LG9 513 aa13.84□□□□□ -0.19
TMEM39A-211ENST00000491685 MTMR14Q8NCE2 650 aa13.84□□□□□ -0.19
TMEM39A-211ENST00000491685 KLHDC4Q8TBB5 520 aa13.84□□□□□ -0.19
TMEM39A-211ENST00000491685 PRMT6Q96LA8 375 aaPredicted RBP13.84□□□□□ -0.19
TMEM39A-211ENST00000491685 SMC4Q9NTJ3 1288 aa13.84□□□□□ -0.19
TMEM39A-211ENST00000491685 FKBP1AP62942 108 aaKnown RBP13.83□□□□□ -0.2
TMEM39A-211ENST00000491685 GRIK5Q16478 980 aa13.83□□□□□ -0.2
TMEM39A-211ENST00000491685 CTU1Q7Z7A3 348 aaKnown RBP13.83□□□□□ -0.2
TMEM39A-211ENST00000491685 TDRD7Q8NHU6 1098 aaKnown RBP13.83□□□□□ -0.2
TMEM39A-211ENST00000491685 DEFB129Q9H1M3 183 aa13.83□□□□□ -0.2
TMEM39A-211ENST00000491685 ANGEL1Q9UNK9 670 aaKnown RBP13.83□□□□□ -0.2
TMEM39A-211ENST00000491685 RIPOR2Q9Y4F9 1068 aa13.83□□□□□ -0.2
TMEM39A-211ENST00000491685 PTPRCP08575 1304 aa13.83□□□□□ -0.2
TMEM39A-211ENST00000491685 FAM205AQ6ZU69 1335 aa13.83□□□□□ -0.2
TMEM39A-211ENST00000491685 NF2P35240 595 aa13.82□□□□□ -0.2
TMEM39A-211ENST00000491685 UBE4AQ14139 1066 aa13.82□□□□□ -0.2
TMEM39A-211ENST00000491685 LDLRAD1Q5T700 205 aa13.82□□□□□ -0.2
TMEM39A-211ENST00000491685 VGLL2Q8N8G2 317 aa13.82□□□□□ -0.2
TMEM39A-211ENST00000491685 FAM84BQ96KN1 310 aaPredicted RBP13.82□□□□□ -0.2
TMEM39A-211ENST00000491685 IQSEC3Q9UPP2 1182 aaPredicted RBP13.82□□□□□ -0.2
TMEM39A-211ENST00000491685 TBC1D8O95759 1140 aa13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 HIBADHP31937 336 aaKnown RBP13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 RARSP54136 660 aaKnown RBP13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 MFSD14BQ5SR56 506 aa13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 ARMC9Q7Z3E5 817 aa13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 CDAN1Q8IWY9 1227 aa13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 USP44Q9H0E7 712 aa13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 VEZTQ9HBM0 779 aa13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 MROH5Q6ZUA9 1318 aa13.81□□□□□ -0.2
TMEM39A-211ENST00000491685 CENPBP07199 599 aaPredicted RBP13.8□□□□□ -0.2
TMEM39A-211ENST00000491685 NBPF12Q5TAG4 269 aaPredicted RBP13.8□□□□□ -0.2
TMEM39A-211ENST00000491685 REM2Q8IYK8 340 aaPredicted RBP13.8□□□□□ -0.2
TMEM39A-211ENST00000491685 ARHGAP45Q92619 1136 aa13.8□□□□□ -0.2
TMEM39A-211ENST00000491685 API5Q9BZZ5 524 aaKnown RBP13.8□□□□□ -0.2
TMEM39A-211ENST00000491685 R3HDMLQ9H3Y0 253 aa13.8□□□□□ -0.2
TMEM39A-211ENST00000491685 TTF2Q9UNY4 1162 aaKnown RBP13.8□□□□□ -0.2
TMEM39A-211ENST00000491685 MS4A1P11836 297 aa13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 TM4SF4P48230 202 aa13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 RFX5P48382 616 aaPredicted RBP13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 RBM5P52756 815 aaKnown RBP eCLIP13.79□□□□□ -0.22e-6■■■■□ 22.4
TMEM39A-211ENST00000491685 MAP3K11Q16584 847 aa13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 METTL24Q5JXM2 366 aa13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 SPRYD7Q5W111 196 aa13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 FBXO33Q7Z6M2 555 aa13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 TDRD3Q9H7E2 651 aaKnown RBP13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 NOB1Q9ULX3 412 aaKnown RBP13.79□□□□□ -0.2
TMEM39A-211ENST00000491685 HPS5Q9UPZ3 1129 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms