RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 JAG2Q9Y219 1238 aa19.86■□□□□ 0.77
SMPD4-220ENST00000491319 LAMB1P07942 1786 aa19.85■□□□□ 0.77
SMPD4-220ENST00000491319 UTYO14607 1347 aa19.85■□□□□ 0.77
SMPD4-220ENST00000491319 F8W031 263 aaPredicted RBP19.85■□□□□ 0.77
SMPD4-220ENST00000491319 TRPA1O75762 1119 aa19.85■□□□□ 0.77
SMPD4-220ENST00000491319 TTLL12Q14166 644 aaPredicted RBP19.85■□□□□ 0.77
SMPD4-220ENST00000491319 PUS3Q9BZE2 481 aaKnown RBP19.85■□□□□ 0.77
SMPD4-220ENST00000491319 RNF186Q9NXI6 227 aa19.85■□□□□ 0.77
SMPD4-220ENST00000491319 PCDHAC2Q9Y5I4 1007 aa19.85■□□□□ 0.77
SMPD4-220ENST00000491319 COL1A1P02452 1464 aaPredicted RBP19.85■□□□□ 0.77
SMPD4-220ENST00000491319 OTOFQ9HC10 1997 aa19.84■□□□□ 0.77
SMPD4-220ENST00000491319 CCDC85CA6NKD9 419 aa19.83■□□□□ 0.77
SMPD4-220ENST00000491319 E9PSI1 815 aa19.83■□□□□ 0.77
SMPD4-220ENST00000491319 NF2P35240 595 aa19.83■□□□□ 0.77
SMPD4-220ENST00000491319 DGKZQ13574 1117 aa19.83■□□□□ 0.77
SMPD4-220ENST00000491319 DLGAP5Q15398 846 aa19.83■□□□□ 0.77
SMPD4-220ENST00000491319 SSH1Q8WYL5 1049 aa19.83■□□□□ 0.77
SMPD4-220ENST00000491319 BICC1Q9H694 974 aaKnown RBP19.83■□□□□ 0.77
SMPD4-220ENST00000491319 SSC5DA1L4H1 1573 aa19.83■□□□□ 0.76
SMPD4-220ENST00000491319 PTPRCP08575 1304 aa19.82■□□□□ 0.76
SMPD4-220ENST00000491319 PRKG1Q13976 671 aa19.82■□□□□ 0.76
SMPD4-220ENST00000491319 AOX1Q06278 1338 aa19.81■□□□□ 0.76
SMPD4-220ENST00000491319 GYG1P46976 350 aa19.81■□□□□ 0.76
SMPD4-220ENST00000491319 FKBP1AP62942 108 aaKnown RBP19.81■□□□□ 0.76
SMPD4-220ENST00000491319 SLFN5Q08AF3 891 aa19.81■□□□□ 0.76
SMPD4-220ENST00000491319 UBE4AQ14139 1066 aa19.81■□□□□ 0.76
SMPD4-220ENST00000491319 RABL6Q3YEC7 729 aaPredicted RBP19.81■□□□□ 0.76
SMPD4-220ENST00000491319 CFAP100Q494V2 611 aa19.81■□□□□ 0.76
SMPD4-220ENST00000491319 ANKRD44Q8N8A2 993 aa19.81■□□□□ 0.76
SMPD4-220ENST00000491319 MTMR14Q8NCE2 650 aa19.81■□□□□ 0.76
SMPD4-220ENST00000491319 CLRN2A0PK11 232 aa19.8■□□□□ 0.76
SMPD4-220ENST00000491319 MKRN3Q13064 507 aaKnown RBP19.8■□□□□ 0.76
SMPD4-220ENST00000491319 FZD1Q9UP38 647 aa19.8■□□□□ 0.76
SMPD4-220ENST00000491319 RIPOR2Q9Y4F9 1068 aa19.8■□□□□ 0.76
SMPD4-220ENST00000491319 SPDYE2BA6NHP3 402 aa19.79■□□□□ 0.76
SMPD4-220ENST00000491319 SPDYE6P0CI01 402 aa19.79■□□□□ 0.76
SMPD4-220ENST00000491319 PTPN12Q05209 780 aaKnown RBP19.79■□□□□ 0.76
SMPD4-220ENST00000491319 ARMC9Q7Z3E5 817 aa19.79■□□□□ 0.76
SMPD4-220ENST00000491319 REM2Q8IYK8 340 aaPredicted RBP19.79■□□□□ 0.76
SMPD4-220ENST00000491319 TDRD7Q8NHU6 1098 aaKnown RBP19.79■□□□□ 0.76
SMPD4-220ENST00000491319 CDCA7LQ96GN5 454 aa19.79■□□□□ 0.76
SMPD4-220ENST00000491319 DEFB129Q9H1M3 183 aa19.79■□□□□ 0.76
SMPD4-220ENST00000491319 FAM205AQ6ZU69 1335 aa19.78■□□□□ 0.76
SMPD4-220ENST00000491319 MROH5Q6ZUA9 1318 aa19.78■□□□□ 0.76
SMPD4-220ENST00000491319 HIBADHP31937 336 aaKnown RBP19.78■□□□□ 0.76
SMPD4-220ENST00000491319 LRRC24Q50LG9 513 aa19.78■□□□□ 0.76
SMPD4-220ENST00000491319 MFSD14BQ5SR56 506 aa19.78■□□□□ 0.76
SMPD4-220ENST00000491319 FAM84BQ96KN1 310 aaPredicted RBP19.78■□□□□ 0.76
SMPD4-220ENST00000491319 PRMT6Q96LA8 375 aaPredicted RBP19.78■□□□□ 0.76
SMPD4-220ENST00000491319 ANGEL1Q9UNK9 670 aaKnown RBP19.78■□□□□ 0.76
SMPD4-220ENST00000491319 MYO1BO43795 1136 aa19.77■□□□□ 0.76
SMPD4-220ENST00000491319 RBM5P52756 815 aaKnown RBP eCLIP19.77■□□□□ 0.76
SMPD4-220ENST00000491319 KLHDC4Q8TBB5 520 aa19.77■□□□□ 0.76
SMPD4-220ENST00000491319 USP44Q9H0E7 712 aa19.77■□□□□ 0.76
SMPD4-220ENST00000491319 VEZTQ9HBM0 779 aa19.77■□□□□ 0.76
SMPD4-220ENST00000491319 METTL24Q5JXM2 366 aa19.76■□□□□ 0.75
SMPD4-220ENST00000491319 ALDH1L2Q3SY69 923 aa19.75■□□□□ 0.75
SMPD4-220ENST00000491319 LDLRAD1Q5T700 205 aa19.75■□□□□ 0.75
SMPD4-220ENST00000491319 VGLL2Q8N8G2 317 aa19.75■□□□□ 0.75
SMPD4-220ENST00000491319 SMC4Q9NTJ3 1288 aa19.75■□□□□ 0.75
SMPD4-220ENST00000491319 TTF2Q9UNY4 1162 aaKnown RBP19.75■□□□□ 0.75
SMPD4-220ENST00000491319 IQSEC3Q9UPP2 1182 aaPredicted RBP19.75■□□□□ 0.75
SMPD4-220ENST00000491319 PPP2R3BQ9Y5P8 575 aa19.75■□□□□ 0.75
SMPD4-220ENST00000491319 TBC1D8O95759 1140 aa19.73■□□□□ 0.75
SMPD4-220ENST00000491319 TM4SF4P48230 202 aa19.73■□□□□ 0.75
SMPD4-220ENST00000491319 FBXO33Q7Z6M2 555 aa19.73■□□□□ 0.75
SMPD4-220ENST00000491319 VPS37DQ86XT2 251 aa19.73■□□□□ 0.75
SMPD4-220ENST00000491319 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.73■□□□□ 0.75
SMPD4-220ENST00000491319 PDE8BO95263 885 aa19.72■□□□□ 0.75
SMPD4-220ENST00000491319 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
SMPD4-220ENST00000491319 GRIK5Q16478 980 aa19.72■□□□□ 0.75
SMPD4-220ENST00000491319 MAP3K11Q16584 847 aa19.72■□□□□ 0.75
SMPD4-220ENST00000491319 SPDYE2Q495Y8 402 aa19.72■□□□□ 0.75
SMPD4-220ENST00000491319 NBPF12Q5TAG4 269 aaPredicted RBP19.72■□□□□ 0.75
SMPD4-220ENST00000491319 SPRYD7Q5W111 196 aa19.72■□□□□ 0.75
SMPD4-220ENST00000491319 TRMT2AQ8IZ69 625 aaKnown RBP19.72■□□□□ 0.75
SMPD4-220ENST00000491319 CLMNQ96JQ2 1002 aa19.72■□□□□ 0.75
SMPD4-220ENST00000491319 SERPINA10Q9UK55 444 aa19.72■□□□□ 0.75
SMPD4-220ENST00000491319 PPP1R12BO60237 982 aaPredicted RBP19.71■□□□□ 0.75
SMPD4-220ENST00000491319 SREBF2Q12772 1141 aa19.71■□□□□ 0.75
SMPD4-220ENST00000491319 RASA3Q14644 834 aa19.71■□□□□ 0.75
SMPD4-220ENST00000491319 CTU1Q7Z7A3 348 aaKnown RBP19.71■□□□□ 0.75
SMPD4-220ENST00000491319 TDRD3Q9H7E2 651 aaKnown RBP19.71■□□□□ 0.75
SMPD4-220ENST00000491319 ZNF70Q9UC06 446 aaPredicted RBP19.71■□□□□ 0.75
SMPD4-220ENST00000491319 CRKP46108 304 aa19.7■□□□□ 0.74
SMPD4-220ENST00000491319 RFX5P48382 616 aaPredicted RBP19.7■□□□□ 0.74
SMPD4-220ENST00000491319 RGS19P49795 217 aa19.7■□□□□ 0.74
SMPD4-220ENST00000491319 SUPT20HL1Q3ZLR7 823 aa19.7■□□□□ 0.74
SMPD4-220ENST00000491319 CAVIN4Q5BKX8 364 aa19.7■□□□□ 0.74
SMPD4-220ENST00000491319 DZIP1LQ8IYY4 767 aaKnown RBP19.7■□□□□ 0.74
SMPD4-220ENST00000491319 ZNF296Q8WUU4 475 aaPredicted RBP19.7■□□□□ 0.74
SMPD4-220ENST00000491319 BCAMP50895 628 aa19.69■□□□□ 0.74
SMPD4-220ENST00000491319 TNFAIP1Q13829 316 aa19.69■□□□□ 0.74
SMPD4-220ENST00000491319 CDAN1Q8IWY9 1227 aa19.69■□□□□ 0.74
SMPD4-220ENST00000491319 SLC10A4Q96EP9 437 aa19.69■□□□□ 0.74
SMPD4-220ENST00000491319 WNK4Q96J92 1243 aa19.69■□□□□ 0.74
SMPD4-220ENST00000491319 AK9Q5TCS8 1911 aa19.68■□□□□ 0.74
SMPD4-220ENST00000491319 FRAT2O75474 233 aaPredicted RBP19.68■□□□□ 0.74
SMPD4-220ENST00000491319 FGFR2P21802 821 aa19.68■□□□□ 0.74
SMPD4-220ENST00000491319 MLLT1Q03111 559 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms