RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 PRKG1Q13976 671 aa24.85■■□□□ 1.57
SREBF1-216ENST00000490796 IRS2Q9Y4H2 1338 aa24.85■■□□□ 1.57
SREBF1-216ENST00000490796 RBM5P52756 815 aaKnown RBP eCLIP24.84■■□□□ 1.57
SREBF1-216ENST00000490796 CERS5Q8N5B7 392 aa24.84■■□□□ 1.57
SREBF1-216ENST00000490796 MRPL50Q8N5N7 158 aaKnown RBP24.84■■□□□ 1.57
SREBF1-216ENST00000490796 JAG2Q9Y219 1238 aa24.84■■□□□ 1.57
SREBF1-216ENST00000490796 AKAP11Q9UKA4 1901 aa24.84■■□□□ 1.57
SREBF1-216ENST00000490796 NBPF7P0C2Y1 421 aaPredicted RBP24.83■■□□□ 1.57
SREBF1-216ENST00000490796 FKBP1AP62942 108 aaKnown RBP24.83■■□□□ 1.57
SREBF1-216ENST00000490796 UBE4AQ14139 1066 aa24.83■■□□□ 1.57
SREBF1-216ENST00000490796 ZBED3Q96IU2 234 aaPredicted RBP24.83■■□□□ 1.57
SREBF1-216ENST00000490796 PTPRCP08575 1304 aa24.83■■□□□ 1.56
SREBF1-216ENST00000490796 ZNF646O15015 1829 aaPredicted RBP24.82■■□□□ 1.56
SREBF1-216ENST00000490796 CFAP100Q494V2 611 aa24.82■■□□□ 1.56
SREBF1-216ENST00000490796 MTMR14Q8NCE2 650 aa24.82■■□□□ 1.56
SREBF1-216ENST00000490796 DEFB129Q9H1M3 183 aa24.82■■□□□ 1.56
SREBF1-216ENST00000490796 HIBADHP31937 336 aaKnown RBP24.81■■□□□ 1.56
SREBF1-216ENST00000490796 VPS37DQ86XT2 251 aa24.81■■□□□ 1.56
SREBF1-216ENST00000490796 BICC1Q9H694 974 aaKnown RBP24.81■■□□□ 1.56
SREBF1-216ENST00000490796 ANGEL1Q9UNK9 670 aaKnown RBP24.81■■□□□ 1.56
SREBF1-216ENST00000490796 MROH5Q6ZUA9 1318 aa24.81■■□□□ 1.56
SREBF1-216ENST00000490796 MKRN3Q13064 507 aaKnown RBP24.8■■□□□ 1.56
SREBF1-216ENST00000490796 PUS3Q9BZE2 481 aaKnown RBP24.8■■□□□ 1.56
SREBF1-216ENST00000490796 VEZTQ9HBM0 779 aa24.8■■□□□ 1.56
SREBF1-216ENST00000490796 UTYO14607 1347 aa24.8■■□□□ 1.56
SREBF1-216ENST00000490796 COL1A1P02452 1464 aaPredicted RBP24.79■■□□□ 1.56
SREBF1-216ENST00000490796 CLRN2A0PK11 232 aa24.79■■□□□ 1.56
SREBF1-216ENST00000490796 GYG1P46976 350 aa24.79■■□□□ 1.56
SREBF1-216ENST00000490796 SSH1Q8WYL5 1049 aa24.79■■□□□ 1.56
SREBF1-216ENST00000490796 KAZALD1Q96I82 304 aa24.79■■□□□ 1.56
SREBF1-216ENST00000490796 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.79■■□□□ 1.56
SREBF1-216ENST00000490796 PPP2R3BQ9Y5P8 575 aa24.79■■□□□ 1.56
SREBF1-216ENST00000490796 SPDYE2BA6NHP3 402 aa24.78■■□□□ 1.56
SREBF1-216ENST00000490796 PPP1R12BO60237 982 aaPredicted RBP24.78■■□□□ 1.56
SREBF1-216ENST00000490796 SPDYE6P0CI01 402 aa24.78■■□□□ 1.56
SREBF1-216ENST00000490796 PTPN12Q05209 780 aaKnown RBP24.78■■□□□ 1.56
SREBF1-216ENST00000490796 SREBF2Q12772 1141 aa24.78■■□□□ 1.56
SREBF1-216ENST00000490796 METTL24Q5JXM2 366 aa24.78■■□□□ 1.56
SREBF1-216ENST00000490796 MFSD14BQ5SR56 506 aa24.78■■□□□ 1.56
SREBF1-216ENST00000490796 A0A1B0GUL6 1792 aa24.77■■□□□ 1.56
SREBF1-216ENST00000490796 FRAT2O75474 233 aaPredicted RBP24.77■■□□□ 1.56
SREBF1-216ENST00000490796 SLFN5Q08AF3 891 aa24.77■■□□□ 1.56
SREBF1-216ENST00000490796 SUPT20HL1Q3ZLR7 823 aa24.77■■□□□ 1.56
SREBF1-216ENST00000490796 TDRD7Q8NHU6 1098 aaKnown RBP24.77■■□□□ 1.56
SREBF1-216ENST00000490796 RIPOR2Q9Y4F9 1068 aa24.77■■□□□ 1.56
SREBF1-216ENST00000490796 FAM205AQ6ZU69 1335 aa24.77■■□□□ 1.56
SREBF1-216ENST00000490796 RABL6Q3YEC7 729 aaPredicted RBP24.76■■□□□ 1.55
SREBF1-216ENST00000490796 CAVIN4Q5BKX8 364 aa24.76■■□□□ 1.55
SREBF1-216ENST00000490796 SLC10A4Q96EP9 437 aa24.76■■□□□ 1.55
SREBF1-216ENST00000490796 FAM84BQ96KN1 310 aaPredicted RBP24.76■■□□□ 1.55
SREBF1-216ENST00000490796 PRMT6Q96LA8 375 aaPredicted RBP24.76■■□□□ 1.55
SREBF1-216ENST00000490796 TTF2Q9UNY4 1162 aaKnown RBP24.76■■□□□ 1.55
SREBF1-216ENST00000490796 PCDHAC2Q9Y5I4 1007 aa24.76■■□□□ 1.55
SREBF1-216ENST00000490796 SMC4Q9NTJ3 1288 aa24.75■■□□□ 1.55
SREBF1-216ENST00000490796 TM4SF4P48230 202 aa24.74■■□□□ 1.55
SREBF1-216ENST00000490796 MLLT1Q03111 559 aaPredicted RBP24.74■■□□□ 1.55
SREBF1-216ENST00000490796 ALDH1L2Q3SY69 923 aa24.74■■□□□ 1.55
SREBF1-216ENST00000490796 LDLRAD1Q5T700 205 aa24.74■■□□□ 1.55
SREBF1-216ENST00000490796 CTU1Q7Z7A3 348 aaKnown RBP24.74■■□□□ 1.55
SREBF1-216ENST00000490796 TBC1D8O95759 1140 aa24.73■■□□□ 1.55
SREBF1-216ENST00000490796 TNFAIP1Q13829 316 aa24.73■■□□□ 1.55
SREBF1-216ENST00000490796 LRRC24Q50LG9 513 aa24.73■■□□□ 1.55
SREBF1-216ENST00000490796 ANKRD44Q8N8A2 993 aa24.73■■□□□ 1.55
SREBF1-216ENST00000490796 SERPINA10Q9UK55 444 aa24.73■■□□□ 1.55
SREBF1-216ENST00000490796 CHAF1AQ13111 956 aaPredicted RBP24.72■■□□□ 1.55
SREBF1-216ENST00000490796 SPRYD7Q5W111 196 aa24.72■■□□□ 1.55
SREBF1-216ENST00000490796 FZD1Q9UP38 647 aa24.72■■□□□ 1.55
SREBF1-216ENST00000490796 IREB2P48200 963 aaKnown RBP24.71■■□□□ 1.55
SREBF1-216ENST00000490796 RASA3Q14644 834 aa24.71■■□□□ 1.55
SREBF1-216ENST00000490796 TBC1D22AQ8WUA7 517 aa24.71■■□□□ 1.55
SREBF1-216ENST00000490796 USP44Q9H0E7 712 aa24.71■■□□□ 1.55
SREBF1-216ENST00000490796 IQSEC3Q9UPP2 1182 aaPredicted RBP24.71■■□□□ 1.55
SREBF1-216ENST00000490796 PDE8BO95263 885 aa24.7■■□□□ 1.54
SREBF1-216ENST00000490796 NBPF12Q5TAG4 269 aaPredicted RBP24.7■■□□□ 1.54
SREBF1-216ENST00000490796 FBXO33Q7Z6M2 555 aa24.7■■□□□ 1.54
SREBF1-216ENST00000490796 CDCA7LQ96GN5 454 aa24.7■■□□□ 1.54
SREBF1-216ENST00000490796 IFIT1P09914 478 aaKnown RBP24.69■■□□□ 1.54
SREBF1-216ENST00000490796 RGS19P49795 217 aa24.69■■□□□ 1.54
SREBF1-216ENST00000490796 MAP3K11Q16584 847 aa24.69■■□□□ 1.54
SREBF1-216ENST00000490796 KLHDC4Q8TBB5 520 aa24.69■■□□□ 1.54
SREBF1-216ENST00000490796 TDRD3Q9H7E2 651 aaKnown RBP24.69■■□□□ 1.54
SREBF1-216ENST00000490796 ZNF70Q9UC06 446 aaPredicted RBP24.69■■□□□ 1.54
SREBF1-216ENST00000490796 MANSC4A6NHS7 340 aaPredicted RBP24.68■■□□□ 1.54
SREBF1-216ENST00000490796 UNCXA6NJT0 531 aa24.68■■□□□ 1.54
SREBF1-216ENST00000490796 ALDH1A1P00352 501 aa24.68■■□□□ 1.54
SREBF1-216ENST00000490796 CRKP46108 304 aa24.68■■□□□ 1.54
SREBF1-216ENST00000490796 TNNI2P48788 182 aa24.68■■□□□ 1.54
SREBF1-216ENST00000490796 INHBEP58166 350 aa24.68■■□□□ 1.54
SREBF1-216ENST00000490796 SPDYE2Q495Y8 402 aa24.68■■□□□ 1.54
SREBF1-216ENST00000490796 DZIP1LQ8IYY4 767 aaKnown RBP24.68■■□□□ 1.54
SREBF1-216ENST00000490796 ZNF296Q8WUU4 475 aaPredicted RBP24.68■■□□□ 1.54
SREBF1-216ENST00000490796 ECM29Q5VYK3 1845 aa24.68■■□□□ 1.54
SREBF1-216ENST00000490796 ZBTB48P10074 688 aaPredicted RBP24.67■■□□□ 1.54
SREBF1-216ENST00000490796 PUM3Q15397 648 aaKnown RBP24.67■■□□□ 1.54
SREBF1-216ENST00000490796 AOX1Q06278 1338 aa24.66■■□□□ 1.54
SREBF1-216ENST00000490796 GPR25O00155 361 aa24.66■■□□□ 1.54
SREBF1-216ENST00000490796 CT47B1P0C2W7 299 aaPredicted RBP24.66■■□□□ 1.54
SREBF1-216ENST00000490796 UBTFL1P0CB47 393 aaPredicted RBP24.66■■□□□ 1.54
SREBF1-216ENST00000490796 PKN2Q16513 984 aaKnown RBP24.66■■□□□ 1.54
SREBF1-216ENST00000490796 WNK4Q96J92 1243 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms