RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 EAF2Q96CJ1 260 aaPredicted RBP17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 NEUROD6Q96NK8 337 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 TLR7Q9NYK1 1049 aaKnown RBP17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 LMOD1P29536 600 aaPredicted RBP17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 HSP90AB4PQ58FF6 505 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 ERC1Q8IUD2 1116 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 TRPM4Q8TD43 1214 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 DBNDD2Q9BQY9 259 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 DCTPP1Q9H773 170 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 IL1RAPL2Q9NP60 686 aa17.74■□□□□ 0.43
SRGAP3-208ENST00000490348 ADAMTSL1Q8N6G6 1762 aa17.73■□□□□ 0.43
SRGAP3-208ENST00000490348 HIRAP54198 1017 aaPredicted RBP17.73■□□□□ 0.43
SRGAP3-208ENST00000490348 DBNLQ9UJU6 430 aaKnown RBP17.73■□□□□ 0.43
SRGAP3-208ENST00000490348 RAB11FIP3O75154 756 aa17.72■□□□□ 0.43
SRGAP3-208ENST00000490348 ZNF280AP59817 542 aaPredicted RBP17.72■□□□□ 0.43
SRGAP3-208ENST00000490348 AAMPQ13685 434 aa17.72■□□□□ 0.43
SRGAP3-208ENST00000490348 GRIK5Q16478 980 aa17.72■□□□□ 0.43
SRGAP3-208ENST00000490348 SAMD7Q7Z3H4 446 aa17.72■□□□□ 0.43
SRGAP3-208ENST00000490348 KIF1BPQ96EK5 621 aa17.72■□□□□ 0.43
SRGAP3-208ENST00000490348 ADARB2Q9NS39 739 aaKnown RBP17.72■□□□□ 0.43
SRGAP3-208ENST00000490348 MYO3BQ8WXR4 1341 aa17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 ZBTB22O15209 634 aa17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 TOMM70O94826 608 aa17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 USP17L8P0C7I0 530 aa17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 FKBP1AP62942 108 aaKnown RBP17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 CHAF1AQ13111 956 aaPredicted RBP17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 RASGRF1Q13972 1273 aa17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 MFSD14BQ5SR56 506 aa17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 KIAA0825Q8IV33 1275 aa17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 CCDC8Q9H0W5 538 aaPredicted RBP17.71■□□□□ 0.43
SRGAP3-208ENST00000490348 FRAT2O75474 233 aaPredicted RBP17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 HDAC1Q13547 482 aaPredicted RBP17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 TBC1D10BQ4KMP7 808 aaPredicted RBP17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 EAPPQ56P03 285 aaPredicted RBP17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 H7C1D1 291 aa17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 SCARF1Q14162 830 aa17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 USP50Q70EL3 339 aaPredicted RBP17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 AACSQ86V21 672 aa17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 PNMA8AQ86V59 439 aaPredicted RBP17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 C16orf71Q8IYS4 520 aaPredicted RBP17.7■□□□□ 0.42
SRGAP3-208ENST00000490348 SMARCA5O60264 1052 aaPredicted RBP17.69■□□□□ 0.42
SRGAP3-208ENST00000490348 ARID4AP29374 1257 aaPredicted RBP17.69■□□□□ 0.42
SRGAP3-208ENST00000490348 PI16Q6UXB8 463 aa17.69■□□□□ 0.42
SRGAP3-208ENST00000490348 RBM46Q8TBY0 533 aaKnown RBP17.69■□□□□ 0.42
SRGAP3-208ENST00000490348 GNL3LQ9NVN8 582 aaKnown RBP17.69■□□□□ 0.42
SRGAP3-208ENST00000490348 MYH13Q9UKX3 1938 aa17.68■□□□□ 0.42
SRGAP3-208ENST00000490348 F8W031 263 aaPredicted RBP17.68■□□□□ 0.42
SRGAP3-208ENST00000490348 SEMA3EO15041 775 aa17.68■□□□□ 0.42
SRGAP3-208ENST00000490348 MCAMP43121 646 aa17.68■□□□□ 0.42
SRGAP3-208ENST00000490348 GORABQ5T7V8 394 aa17.68■□□□□ 0.42
SRGAP3-208ENST00000490348 LDHDQ86WU2 507 aa17.68■□□□□ 0.42
SRGAP3-208ENST00000490348 LRRCC1Q9C099 1032 aa17.68■□□□□ 0.42
SRGAP3-208ENST00000490348 MYOZ2Q9NPC6 264 aa17.68■□□□□ 0.42
SRGAP3-208ENST00000490348 ASTN2O75129 1339 aaPredicted RBP17.68■□□□□ 0.42
SRGAP3-208ENST00000490348 IGHDP01880 384 aa17.67■□□□□ 0.42
SRGAP3-208ENST00000490348 KIF4BQ2VIQ3 1234 aa17.67■□□□□ 0.42
SRGAP3-208ENST00000490348 RBM26Q5T8P6 1007 aaKnown RBP17.67■□□□□ 0.42
SRGAP3-208ENST00000490348 CLASRPQ8N2M8 674 aaKnown RBP17.67■□□□□ 0.42
SRGAP3-208ENST00000490348 HMG20BQ9P0W2 317 aa17.67■□□□□ 0.42
SRGAP3-208ENST00000490348 DENND2AQ9ULE3 1009 aa17.67■□□□□ 0.42
SRGAP3-208ENST00000490348 PCDHAC2Q9Y5I4 1007 aa17.67■□□□□ 0.42
SRGAP3-208ENST00000490348 PCNTO95613 3336 aa17.67■□□□□ 0.42
SRGAP3-208ENST00000490348 TBC1D22AQ8WUA7 517 aa17.66■□□□□ 0.42
SRGAP3-208ENST00000490348 BCL11AQ9H165 835 aa17.66■□□□□ 0.42
SRGAP3-208ENST00000490348 PDS5AQ29RF7 1337 aaKnown RBP17.66■□□□□ 0.42
SRGAP3-208ENST00000490348 OGFOD1Q8N543 542 aa17.66■□□□□ 0.42
SRGAP3-208ENST00000490348 SPATA5Q8NB90 893 aa17.66■□□□□ 0.42
SRGAP3-208ENST00000490348 WDR66Q8TBY9 1149 aa17.66■□□□□ 0.42
SRGAP3-208ENST00000490348 ZBED3Q96IU2 234 aaPredicted RBP17.66■□□□□ 0.42
SRGAP3-208ENST00000490348 ZNF512BQ96KM6 892 aaPredicted RBP17.66■□□□□ 0.42
SRGAP3-208ENST00000490348 PGAP2Q9UHJ9 254 aa17.66■□□□□ 0.42
SRGAP3-208ENST00000490348 AOX1Q06278 1338 aa17.65■□□□□ 0.42
SRGAP3-208ENST00000490348 SALL1Q9NSC2 1324 aa17.65■□□□□ 0.42
SRGAP3-208ENST00000490348 AKAP11Q9UKA4 1901 aa17.65■□□□□ 0.42
SRGAP3-208ENST00000490348 PRDX5P30044 214 aa17.65■□□□□ 0.42
SRGAP3-208ENST00000490348 CCDC158Q5M9N0 1113 aa17.65■□□□□ 0.42
SRGAP3-208ENST00000490348 MAP1SQ66K74 1059 aaPredicted RBP17.65■□□□□ 0.42
SRGAP3-208ENST00000490348 CHADLQ6NUI6 762 aa17.65■□□□□ 0.42
SRGAP3-208ENST00000490348 SMC1BQ8NDV3 1235 aa17.65■□□□□ 0.42
SRGAP3-208ENST00000490348 TTF2Q9UNY4 1162 aaKnown RBP17.65■□□□□ 0.42
SRGAP3-208ENST00000490348 WNT10BO00744 389 aa17.64■□□□□ 0.41
SRGAP3-208ENST00000490348 UQCRFS1P1P0C7P4 283 aa17.64■□□□□ 0.41
SRGAP3-208ENST00000490348 C1QTNF8P60827 252 aa17.64■□□□□ 0.41
SRGAP3-208ENST00000490348 NBPF9Q3BBW0 867 aa17.64■□□□□ 0.41
SRGAP3-208ENST00000490348 TTC39AQ5SRH9 613 aa17.64■□□□□ 0.41
SRGAP3-208ENST00000490348 SNRKQ9NRH2 765 aa17.64■□□□□ 0.41
SRGAP3-208ENST00000490348 CLEC11AQ9Y240 323 aa17.64■□□□□ 0.41
SRGAP3-208ENST00000490348 IFIT2P09913 472 aaKnown RBP17.63■□□□□ 0.41
SRGAP3-208ENST00000490348 MMP14P50281 582 aa17.63■□□□□ 0.41
SRGAP3-208ENST00000490348 FSTL1Q12841 308 aa17.63■□□□□ 0.41
SRGAP3-208ENST00000490348 ITGBL1O95965 494 aaPredicted RBP17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 CFAP100Q494V2 611 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 MTMR14Q8NCE2 650 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 ZC3H15Q8WU90 426 aaKnown RBP17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 HDAC9Q9UKV0 1011 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 SUGT1Q9Y2Z0 365 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 NDUFB9Q9Y6M9 179 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 SMC5Q8IY18 1101 aa17.62■□□□□ 0.41
SRGAP3-208ENST00000490348 CNTROBQ8N137 903 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms