RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 NBPF9Q3BBW0 867 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 TNS4Q8IZW8 715 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 CERS5Q8N5B7 392 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 C2orf69Q8N8R5 385 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 MTMR14Q8NCE2 650 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 PUS3Q9BZE2 481 aaKnown RBP12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 BICC1Q9H694 974 aaKnown RBP12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 ZNF408Q9H9D4 720 aa12.27□□□□□ -0.45
TMEM39A-210ENST00000490099 SASH1O94885 1247 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 KCNJ4P48050 445 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 NOGQ13253 232 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 RGMBQ6NW40 437 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 TDRD7Q8NHU6 1098 aaKnown RBP12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 CCDC102AQ96A19 550 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 ZIC5Q96T25 663 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 CNNM1Q9NRU3 951 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 CHMP3Q9Y3E7 222 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
TMEM39A-210ENST00000490099 CA12O43570 354 aa12.25□□□□□ -0.45
TMEM39A-210ENST00000490099 ZNF804AQ7Z570 1209 aa12.25□□□□□ -0.45
TMEM39A-210ENST00000490099 FBXO33Q7Z6M2 555 aa12.25□□□□□ -0.45
TMEM39A-210ENST00000490099 FAM84BQ96KN1 310 aaPredicted RBP12.25□□□□□ -0.45
TMEM39A-210ENST00000490099 A0A1B0GUL6 1792 aa12.24□□□□□ -0.45
TMEM39A-210ENST00000490099 RFX5P48382 616 aaPredicted RBP12.24□□□□□ -0.45
TMEM39A-210ENST00000490099 TAF7LQ5H9L4 462 aa12.24□□□□□ -0.45
TMEM39A-210ENST00000490099 MROH5Q6ZUA9 1318 aa12.24□□□□□ -0.45
TMEM39A-210ENST00000490099 PAXIP1Q6ZW49 1069 aaPredicted RBP12.24□□□□□ -0.45
TMEM39A-210ENST00000490099 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
TMEM39A-210ENST00000490099 ARHGAP45Q92619 1136 aa12.24□□□□□ -0.45
TMEM39A-210ENST00000490099 HDAC9Q9UKV0 1011 aa12.24□□□□□ -0.45
TMEM39A-210ENST00000490099 SLC10A3P09131 477 aa12.23□□□□□ -0.45
TMEM39A-210ENST00000490099 RARSP54136 660 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-210ENST00000490099 LRRC24Q50LG9 513 aa12.23□□□□□ -0.45
TMEM39A-210ENST00000490099 SMC4Q9NTJ3 1288 aa12.23□□□□□ -0.45
TMEM39A-210ENST00000490099 NOB1Q9ULX3 412 aaKnown RBP12.23□□□□□ -0.45
TMEM39A-210ENST00000490099 KIF16BQ96L93 1317 aa12.22□□□□□ -0.45
TMEM39A-210ENST00000490099 PLIN1O60240 522 aa12.22□□□□□ -0.45
TMEM39A-210ENST00000490099 PDE8BO95263 885 aa12.22□□□□□ -0.45
TMEM39A-210ENST00000490099 FGFR2P21802 821 aa12.22□□□□□ -0.45
TMEM39A-210ENST00000490099 HIBADHP31937 336 aaKnown RBP12.22□□□□□ -0.45
TMEM39A-210ENST00000490099 GRM1Q13255 1194 aa12.22□□□□□ -0.45
TMEM39A-210ENST00000490099 PRMT6Q96LA8 375 aaPredicted RBP12.22□□□□□ -0.45
TMEM39A-210ENST00000490099 BEGAINQ9BUH8 593 aa12.22□□□□□ -0.45
TMEM39A-210ENST00000490099 GYG1P46976 350 aa12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 ZNF157P51786 506 aaPredicted RBP12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 KIF23Q02241 960 aaPredicted RBP12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 LDLRAD1Q5T700 205 aa12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 PRAMEF18Q5VWM3 479 aa12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 INTS3Q68E01 1043 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 FBXW7Q969H0 707 aa12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 CSRNP1Q96S65 589 aa12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 API5Q9BZZ5 524 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 FBXO3Q9UK99 471 aa12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 SCAF8Q9UPN6 1271 aaKnown RBP12.21□□□□□ -0.45
TMEM39A-210ENST00000490099 PAPPA2Q9BXP8 1791 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 EYA2O00167 538 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 DLGAP5Q15398 846 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 MOB2Q70IA6 237 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 ATG9AQ7Z3C6 839 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 RASAL3Q86YV0 1011 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 SPDYE1Q8NFV5 336 aaPredicted RBP12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 KLHDC4Q8TBB5 520 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 MRIQ9BWK5 157 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 SAGE1Q9NXZ1 904 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 PCDHAC2Q9Y5I4 1007 aa12.2□□□□□ -0.46
TMEM39A-210ENST00000490099 AOX1Q06278 1338 aa12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 UBE2Q2LH0YL09 131 aa12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 CIAO1O76071 339 aa12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 HDLBPQ00341 1268 aaKnown RBP12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 MAP3K11Q16584 847 aa12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 CFAP100Q494V2 611 aa12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 MFSD14BQ5SR56 506 aa12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 SERPINA10Q9UK55 444 aa12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 PPP2R3BQ9Y5P8 575 aa12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 COL1A1P02452 1464 aaPredicted RBP12.19□□□□□ -0.46
TMEM39A-210ENST00000490099 UNCXA6NJT0 531 aa12.18□□□□□ -0.46
TMEM39A-210ENST00000490099 UBTFL1P0CB47 393 aaPredicted RBP12.18□□□□□ -0.46
TMEM39A-210ENST00000490099 PUM3Q15397 648 aaKnown RBP12.18□□□□□ -0.46
TMEM39A-210ENST00000490099 GRIK5Q16478 980 aa12.18□□□□□ -0.46
TMEM39A-210ENST00000490099 MIER1Q8N108 512 aa12.18□□□□□ -0.46
TMEM39A-210ENST00000490099 RNF186Q9NXI6 227 aa12.18□□□□□ -0.46
TMEM39A-210ENST00000490099 HDAC5Q9UQL6 1122 aa12.18□□□□□ -0.46
TMEM39A-210ENST00000490099 PITPNM1O00562 1244 aa12.17□□□□□ -0.46
TMEM39A-210ENST00000490099 TM4SF4P48230 202 aa12.17□□□□□ -0.46
TMEM39A-210ENST00000490099 BCAMP50895 628 aa12.17□□□□□ -0.46
TMEM39A-210ENST00000490099 MTX1Q13505 466 aa12.17□□□□□ -0.46
TMEM39A-210ENST00000490099 TBC1D22AQ8WUA7 517 aa12.17□□□□□ -0.46
TMEM39A-210ENST00000490099 COPRSQ9NQ92 184 aa12.17□□□□□ -0.46
TMEM39A-210ENST00000490099 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
TMEM39A-210ENST00000490099 JAG2Q9Y219 1238 aa12.17□□□□□ -0.46
TMEM39A-210ENST00000490099 SUGT1Q9Y2Z0 365 aa12.17□□□□□ -0.46
TMEM39A-210ENST00000490099 F8W031 263 aaPredicted RBP12.16□□□□□ -0.46
TMEM39A-210ENST00000490099 IFIT1P09914 478 aaKnown RBP12.16□□□□□ -0.46
TMEM39A-210ENST00000490099 NF2P35240 595 aa12.16□□□□□ -0.46
TMEM39A-210ENST00000490099 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms