RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 OGFOD1Q8N543 542 aa14.96□□□□□ -0.01
ACTN4-206ENST00000489451 SLC17A8Q8NDX2 589 aa14.96□□□□□ -0.01
ACTN4-206ENST00000489451 ARAP2Q8WZ64 1704 aa14.96□□□□□ -0.01
ACTN4-206ENST00000489451 IL1R1P14778 569 aa14.95□□□□□ -0.02
ACTN4-206ENST00000489451 KCNJ4P48050 445 aa14.95□□□□□ -0.02
ACTN4-206ENST00000489451 PTPN12Q05209 780 aaKnown RBP14.95□□□□□ -0.02
ACTN4-206ENST00000489451 IFIT5Q13325 482 aaKnown RBP14.95□□□□□ -0.02
ACTN4-206ENST00000489451 SUCLG2Q96I99 432 aa14.95□□□□□ -0.02
ACTN4-206ENST00000489451 JAG2Q9Y219 1238 aa14.95□□□□□ -0.02
ACTN4-206ENST00000489451 HTTP42858 3142 aa14.94□□□□□ -0.02
ACTN4-206ENST00000489451 LDLRAD1Q5T700 205 aa14.94□□□□□ -0.02
ACTN4-206ENST00000489451 CHMP3Q9Y3E7 222 aa14.94□□□□□ -0.02
ACTN4-206ENST00000489451 COL1A1P02452 1464 aaPredicted RBP14.94□□□□□ -0.02
ACTN4-206ENST00000489451 OTOFQ9HC10 1997 aa14.93□□□□□ -0.02
ACTN4-206ENST00000489451 MMP14P50281 582 aa14.93□□□□□ -0.02
ACTN4-206ENST00000489451 MKRN3Q13064 507 aaKnown RBP14.93□□□□□ -0.02
ACTN4-206ENST00000489451 PKN2Q16513 984 aaKnown RBP14.93□□□□□ -0.02
ACTN4-206ENST00000489451 APOBEC3FQ8IUX4 373 aaKnown RBP14.93□□□□□ -0.02
ACTN4-206ENST00000489451 FAM9BQ8IZU0 186 aa14.93□□□□□ -0.02
ACTN4-206ENST00000489451 MTMR14Q8NCE2 650 aa14.93□□□□□ -0.02
ACTN4-206ENST00000489451 PUS3Q9BZE2 481 aaKnown RBP14.93□□□□□ -0.02
ACTN4-206ENST00000489451 UTYO14607 1347 aa14.92□□□□□ -0.02
ACTN4-206ENST00000489451 F8W031 263 aaPredicted RBP14.92□□□□□ -0.02
ACTN4-206ENST00000489451 ALDH1L1O75891 902 aa14.92□□□□□ -0.02
ACTN4-206ENST00000489451 TBC1D8O95759 1140 aa14.92□□□□□ -0.02
ACTN4-206ENST00000489451 NBPF7P0C2Y1 421 aaPredicted RBP14.92□□□□□ -0.02
ACTN4-206ENST00000489451 TM4SF4P48230 202 aa14.92□□□□□ -0.02
ACTN4-206ENST00000489451 PRKG1Q13976 671 aa14.92□□□□□ -0.02
ACTN4-206ENST00000489451 PRMT6Q96LA8 375 aaPredicted RBP14.92□□□□□ -0.02
ACTN4-206ENST00000489451 R3HDMLQ9H3Y0 253 aa14.92□□□□□ -0.02
ACTN4-206ENST00000489451 HDAC9Q9UKV0 1011 aa14.92□□□□□ -0.02
ACTN4-206ENST00000489451 SPDYE2BA6NHP3 402 aa14.91□□□□□ -0.02
ACTN4-206ENST00000489451 SPDYE6P0CI01 402 aa14.91□□□□□ -0.02
ACTN4-206ENST00000489451 FKBP1AP62942 108 aaKnown RBP14.91□□□□□ -0.02
ACTN4-206ENST00000489451 TTLL12Q14166 644 aaPredicted RBP14.91□□□□□ -0.02
ACTN4-206ENST00000489451 CFAP100Q494V2 611 aa14.91□□□□□ -0.02
ACTN4-206ENST00000489451 LDHAL6AQ6ZMR3 332 aa14.91□□□□□ -0.02
ACTN4-206ENST00000489451 REM2Q8IYK8 340 aaPredicted RBP14.91□□□□□ -0.02
ACTN4-206ENST00000489451 DEFB129Q9H1M3 183 aa14.91□□□□□ -0.02
ACTN4-206ENST00000489451 CLRN2A0PK11 232 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 PLIN1O60240 522 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 DLGAP5Q15398 846 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 GRIK5Q16478 980 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 MAP3K11Q16584 847 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 CCDC57Q2TAC2 916 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 SLC4A10Q6U841 1118 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 ZNF804AQ7Z570 1209 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 MRPL50Q8N5N7 158 aaKnown RBP14.9□□□□□ -0.02
ACTN4-206ENST00000489451 ANKRD44Q8N8A2 993 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 TDRD7Q8NHU6 1098 aaKnown RBP14.9□□□□□ -0.02
ACTN4-206ENST00000489451 ZNF296Q8WUU4 475 aaPredicted RBP14.9□□□□□ -0.02
ACTN4-206ENST00000489451 SRCIN1Q9C0H9 1055 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 ANGEL1Q9UNK9 670 aaKnown RBP14.9□□□□□ -0.02
ACTN4-206ENST00000489451 FAM205AQ6ZU69 1335 aa14.9□□□□□ -0.02
ACTN4-206ENST00000489451 NF2P35240 595 aa14.89□□□□□ -0.03
ACTN4-206ENST00000489451 GYG1P46976 350 aa14.89□□□□□ -0.03
ACTN4-206ENST00000489451 RABL6Q3YEC7 729 aaPredicted RBP14.89□□□□□ -0.03
ACTN4-206ENST00000489451 SPRYD7Q5W111 196 aa14.89□□□□□ -0.03
ACTN4-206ENST00000489451 CLMNQ96JQ2 1002 aa14.89□□□□□ -0.03
ACTN4-206ENST00000489451 CNNM1Q9NRU3 951 aa14.89□□□□□ -0.03
ACTN4-206ENST00000489451 C9orf78Q9NZ63 289 aaPredicted RBP14.89□□□□□ -0.03
ACTN4-206ENST00000489451 RIPOR2Q9Y4F9 1068 aa14.89□□□□□ -0.03
ACTN4-206ENST00000489451 GJA5P36382 358 aa14.88□□□□□ -0.03
ACTN4-206ENST00000489451 UBE4AQ14139 1066 aa14.88□□□□□ -0.03
ACTN4-206ENST00000489451 ARMC9Q7Z3E5 817 aa14.88□□□□□ -0.03
ACTN4-206ENST00000489451 CDAN1Q8IWY9 1227 aa14.88□□□□□ -0.03
ACTN4-206ENST00000489451 FAM84BQ96KN1 310 aaPredicted RBP14.88□□□□□ -0.03
ACTN4-206ENST00000489451 CFHR5Q9BXR6 569 aa14.88□□□□□ -0.03
ACTN4-206ENST00000489451 BICC1Q9H694 974 aaKnown RBP14.88□□□□□ -0.03
ACTN4-206ENST00000489451 GPR25O00155 361 aa14.87□□□□□ -0.03
ACTN4-206ENST00000489451 LRRC24Q50LG9 513 aa14.87□□□□□ -0.03
ACTN4-206ENST00000489451 TAF7LQ5H9L4 462 aa14.87□□□□□ -0.03
ACTN4-206ENST00000489451 NBPF12Q5TAG4 269 aaPredicted RBP14.87□□□□□ -0.03
ACTN4-206ENST00000489451 VGLL2Q8N8G2 317 aa14.87□□□□□ -0.03
ACTN4-206ENST00000489451 RBBP6Q7Z6E9 1792 aaKnown RBP14.86□□□□□ -0.03
ACTN4-206ENST00000489451 NOM1Q5C9Z4 860 aaKnown RBP14.86□□□□□ -0.03
ACTN4-206ENST00000489451 MFSD14BQ5SR56 506 aa14.86□□□□□ -0.03
ACTN4-206ENST00000489451 WNK4Q96J92 1243 aa14.86□□□□□ -0.03
ACTN4-206ENST00000489451 COLQQ9Y215 455 aaPredicted RBP14.86□□□□□ -0.03
ACTN4-206ENST00000489451 PPP2R3BQ9Y5P8 575 aa14.86□□□□□ -0.03
ACTN4-206ENST00000489451 CENPFP49454 3210 aa14.85□□□□□ -0.03
ACTN4-206ENST00000489451 IGF2BP3O00425 579 aaKnown RBP eCLIP14.85□□□□□ -0.03
ACTN4-206ENST00000489451 USP2O75604 605 aaPredicted RBP14.85□□□□□ -0.03
ACTN4-206ENST00000489451 HIBADHP31937 336 aaKnown RBP14.85□□□□□ -0.03
ACTN4-206ENST00000489451 SREBF2Q12772 1141 aa14.85□□□□□ -0.03
ACTN4-206ENST00000489451 RASA3Q14644 834 aa14.85□□□□□ -0.03
ACTN4-206ENST00000489451 SPDYE2Q495Y8 402 aa14.85□□□□□ -0.03
ACTN4-206ENST00000489451 FBXO46Q6PJ61 603 aaPredicted RBP14.85□□□□□ -0.03
ACTN4-206ENST00000489451 FBXO33Q7Z6M2 555 aa14.85□□□□□ -0.03
ACTN4-206ENST00000489451 KLHDC4Q8TBB5 520 aa14.85□□□□□ -0.03
ACTN4-206ENST00000489451 SSH1Q8WYL5 1049 aa14.85□□□□□ -0.03
ACTN4-206ENST00000489451 TEPSINQ96N21 525 aa14.85□□□□□ -0.03
ACTN4-206ENST00000489451 VEZTQ9HBM0 779 aa14.85□□□□□ -0.03
ACTN4-206ENST00000489451 USP44Q9H0E7 712 aa14.84□□□□□ -0.03
ACTN4-206ENST00000489451 TDRD3Q9H7E2 651 aaKnown RBP14.84□□□□□ -0.03
ACTN4-206ENST00000489451 ZNF70Q9UC06 446 aaPredicted RBP14.84□□□□□ -0.03
ACTN4-206ENST00000489451 TTF2Q9UNY4 1162 aaKnown RBP14.84□□□□□ -0.03
ACTN4-206ENST00000489451 IQSEC3Q9UPP2 1182 aaPredicted RBP14.84□□□□□ -0.03
ACTN4-206ENST00000489451 CAP1Q01518 475 aa14.83□□□□□ -0.04
ACTN4-206ENST00000489451 IFNL1Q8IU54 200 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms