RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 ZNF594Q96JF6 807 aaPredicted RBP23.34■■□□□ 1.33
HDAC6-231ENST00000488905 C9orf78Q9NZ63 289 aaPredicted RBP23.34■■□□□ 1.33
HDAC6-231ENST00000488905 SSC5DA1L4H1 1573 aa23.33■■□□□ 1.33
HDAC6-231ENST00000488905 SLC4A10Q6U841 1118 aa23.33■■□□□ 1.33
HDAC6-231ENST00000488905 LDHAL6AQ6ZMR3 332 aa23.33■■□□□ 1.33
HDAC6-231ENST00000488905 ARMC9Q7Z3E5 817 aa23.33■■□□□ 1.33
HDAC6-231ENST00000488905 MTMR14Q8NCE2 650 aa23.33■■□□□ 1.33
HDAC6-231ENST00000488905 CNNM1Q9NRU3 951 aa23.33■■□□□ 1.33
HDAC6-231ENST00000488905 PDE4DIPQ5VU43 2346 aa23.33■■□□□ 1.33
HDAC6-231ENST00000488905 FKBP1AP62942 108 aaKnown RBP23.32■■□□□ 1.32
HDAC6-231ENST00000488905 PRKG1Q13976 671 aa23.32■■□□□ 1.32
HDAC6-231ENST00000488905 CTU1Q7Z7A3 348 aaKnown RBP23.32■■□□□ 1.32
HDAC6-231ENST00000488905 SRCIN1Q9C0H9 1055 aa23.32■■□□□ 1.32
HDAC6-231ENST00000488905 OTOFQ9HC10 1997 aa23.32■■□□□ 1.32
HDAC6-231ENST00000488905 F8W031 263 aaPredicted RBP23.31■■□□□ 1.32
HDAC6-231ENST00000488905 PTPN12Q05209 780 aaKnown RBP23.31■■□□□ 1.32
HDAC6-231ENST00000488905 MKRN3Q13064 507 aaKnown RBP23.31■■□□□ 1.32
HDAC6-231ENST00000488905 DEFB129Q9H1M3 183 aa23.31■■□□□ 1.32
HDAC6-231ENST00000488905 ZNF521Q96K83 1311 aa23.31■■□□□ 1.32
HDAC6-231ENST00000488905 PLIN1O60240 522 aa23.3■■□□□ 1.32
HDAC6-231ENST00000488905 JAG2Q9Y219 1238 aa23.3■■□□□ 1.32
HDAC6-231ENST00000488905 PCDHAC2Q9Y5I4 1007 aa23.3■■□□□ 1.32
HDAC6-231ENST00000488905 PPP2R3BQ9Y5P8 575 aa23.3■■□□□ 1.32
HDAC6-231ENST00000488905 HTTP42858 3142 aa23.29■■□□□ 1.32
HDAC6-231ENST00000488905 SPDYE2BA6NHP3 402 aa23.29■■□□□ 1.32
HDAC6-231ENST00000488905 SPDYE6P0CI01 402 aa23.29■■□□□ 1.32
HDAC6-231ENST00000488905 TM4SF4P48230 202 aa23.29■■□□□ 1.32
HDAC6-231ENST00000488905 SREBF2Q12772 1141 aa23.29■■□□□ 1.32
HDAC6-231ENST00000488905 CFAP100Q494V2 611 aa23.29■■□□□ 1.32
HDAC6-231ENST00000488905 LDLRAD1Q5T700 205 aa23.29■■□□□ 1.32
HDAC6-231ENST00000488905 SUCLG2Q96I99 432 aa23.29■■□□□ 1.32
HDAC6-231ENST00000488905 ANGEL1Q9UNK9 670 aaKnown RBP23.29■■□□□ 1.32
HDAC6-231ENST00000488905 MYO1BO43795 1136 aa23.28■■□□□ 1.32
HDAC6-231ENST00000488905 TBC1D8O95759 1140 aa23.28■■□□□ 1.32
HDAC6-231ENST00000488905 FZD1Q9UP38 647 aa23.28■■□□□ 1.32
HDAC6-231ENST00000488905 CLRN2A0PK11 232 aa23.27■■□□□ 1.32
HDAC6-231ENST00000488905 ZNF296Q8WUU4 475 aaPredicted RBP23.27■■□□□ 1.32
HDAC6-231ENST00000488905 KAZALD1Q96I82 304 aa23.27■■□□□ 1.32
HDAC6-231ENST00000488905 MYH13Q9UKX3 1938 aa23.27■■□□□ 1.32
HDAC6-231ENST00000488905 UTYO14607 1347 aa23.27■■□□□ 1.32
HDAC6-231ENST00000488905 FAM205AQ6ZU69 1335 aa23.27■■□□□ 1.32
HDAC6-231ENST00000488905 UBE4AQ14139 1066 aa23.26■■□□□ 1.31
HDAC6-231ENST00000488905 MAP3K11Q16584 847 aa23.26■■□□□ 1.31
HDAC6-231ENST00000488905 SPRYD7Q5W111 196 aa23.26■■□□□ 1.31
HDAC6-231ENST00000488905 AOX1Q06278 1338 aa23.26■■□□□ 1.31
HDAC6-231ENST00000488905 CENPFP49454 3210 aa23.25■■□□□ 1.31
HDAC6-231ENST00000488905 NBPF7P0C2Y1 421 aaPredicted RBP23.25■■□□□ 1.31
HDAC6-231ENST00000488905 NOM1Q5C9Z4 860 aaKnown RBP23.25■■□□□ 1.31
HDAC6-231ENST00000488905 PRMT6Q96LA8 375 aaPredicted RBP23.25■■□□□ 1.31
HDAC6-231ENST00000488905 PUS3Q9BZE2 481 aaKnown RBP23.25■■□□□ 1.31
HDAC6-231ENST00000488905 VEZTQ9HBM0 779 aa23.25■■□□□ 1.31
HDAC6-231ENST00000488905 GYG1P46976 350 aa23.24■■□□□ 1.31
HDAC6-231ENST00000488905 SOX10P56693 466 aa23.24■■□□□ 1.31
HDAC6-231ENST00000488905 MFSD14BQ5SR56 506 aa23.24■■□□□ 1.31
HDAC6-231ENST00000488905 TDRD7Q8NHU6 1098 aaKnown RBP23.24■■□□□ 1.31
HDAC6-231ENST00000488905 CFHR5Q9BXR6 569 aa23.24■■□□□ 1.31
HDAC6-231ENST00000488905 BICC1Q9H694 974 aaKnown RBP23.24■■□□□ 1.31
HDAC6-231ENST00000488905 PPP1R12BO60237 982 aaPredicted RBP23.23■■□□□ 1.31
HDAC6-231ENST00000488905 HIBADHP31937 336 aaKnown RBP23.23■■□□□ 1.31
HDAC6-231ENST00000488905 RBM5P52756 815 aaKnown RBP eCLIP23.23■■□□□ 1.31
HDAC6-231ENST00000488905 MROH5Q6ZUA9 1318 aa23.23■■□□□ 1.31
HDAC6-231ENST00000488905 GPR25O00155 361 aa23.22■■□□□ 1.31
HDAC6-231ENST00000488905 PKN2Q16513 984 aaKnown RBP23.22■■□□□ 1.31
HDAC6-231ENST00000488905 RABL6Q3YEC7 729 aaPredicted RBP23.22■■□□□ 1.31
HDAC6-231ENST00000488905 SUPT20HL1Q3ZLR7 823 aa23.22■■□□□ 1.31
HDAC6-231ENST00000488905 MRPL50Q8N5N7 158 aaKnown RBP23.22■■□□□ 1.31
HDAC6-231ENST00000488905 CLMNQ96JQ2 1002 aa23.22■■□□□ 1.31
HDAC6-231ENST00000488905 FAM84BQ96KN1 310 aaPredicted RBP23.22■■□□□ 1.31
HDAC6-231ENST00000488905 HPS5Q9UPZ3 1129 aa23.22■■□□□ 1.31
HDAC6-231ENST00000488905 ZBTB48P10074 688 aaPredicted RBP23.21■■□□□ 1.31
HDAC6-231ENST00000488905 NBPF12Q5TAG4 269 aaPredicted RBP23.21■■□□□ 1.31
HDAC6-231ENST00000488905 SLC10A4Q96EP9 437 aa23.21■■□□□ 1.31
HDAC6-231ENST00000488905 SERPINA10Q9UK55 444 aa23.21■■□□□ 1.31
HDAC6-231ENST00000488905 TTF2Q9UNY4 1162 aaKnown RBP23.21■■□□□ 1.31
HDAC6-231ENST00000488905 RIPOR2Q9Y4F9 1068 aa23.21■■□□□ 1.31
HDAC6-231ENST00000488905 PTPRCP08575 1304 aa23.21■■□□□ 1.31
HDAC6-231ENST00000488905 MANSC4A6NHS7 340 aaPredicted RBP23.2■■□□□ 1.3
HDAC6-231ENST00000488905 UNCXA6NJT0 531 aa23.2■■□□□ 1.3
HDAC6-231ENST00000488905 RASA3Q14644 834 aa23.2■■□□□ 1.3
HDAC6-231ENST00000488905 ANKRD44Q8N8A2 993 aa23.2■■□□□ 1.3
HDAC6-231ENST00000488905 WNK4Q96J92 1243 aa23.2■■□□□ 1.3
HDAC6-231ENST00000488905 ALDH1A1P00352 501 aa23.19■■□□□ 1.3
HDAC6-231ENST00000488905 IREB2P48200 963 aaKnown RBP23.19■■□□□ 1.3
HDAC6-231ENST00000488905 TNFAIP1Q13829 316 aa23.19■■□□□ 1.3
HDAC6-231ENST00000488905 SPDYE2Q495Y8 402 aa23.19■■□□□ 1.3
HDAC6-231ENST00000488905 R3HDMLQ9H3Y0 253 aa23.19■■□□□ 1.3
HDAC6-231ENST00000488905 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.19■■□□□ 1.3
HDAC6-231ENST00000488905 FKTNO75072 461 aa23.18■■□□□ 1.3
HDAC6-231ENST00000488905 E9PSI1 815 aa23.17■■□□□ 1.3
HDAC6-231ENST00000488905 INHBEP58166 350 aa23.17■■□□□ 1.3
HDAC6-231ENST00000488905 LRRC24Q50LG9 513 aa23.17■■□□□ 1.3
HDAC6-231ENST00000488905 METTL24Q5JXM2 366 aa23.17■■□□□ 1.3
HDAC6-231ENST00000488905 VPS37DQ86XT2 251 aa23.17■■□□□ 1.3
HDAC6-231ENST00000488905 IFNL1Q8IU54 200 aa23.17■■□□□ 1.3
HDAC6-231ENST00000488905 ZNF70Q9UC06 446 aaPredicted RBP23.17■■□□□ 1.3
HDAC6-231ENST00000488905 BRCA2P51587 3418 aa23.17■■□□□ 1.3
HDAC6-231ENST00000488905 MKI67P46013 3256 aaKnown RBP23.16■■□□□ 1.3
HDAC6-231ENST00000488905 FBXO33Q7Z6M2 555 aa23.16■■□□□ 1.3
HDAC6-231ENST00000488905 DZIP1LQ8IYY4 767 aaKnown RBP23.16■■□□□ 1.3
HDAC6-231ENST00000488905 VGLL2Q8N8G2 317 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms