RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 HIBADHP31937 336 aaKnown RBP22.18■■□□□ 1.14
ITGB1-215ENST00000488494 PTPN12Q05209 780 aaKnown RBP22.18■■□□□ 1.14
ITGB1-215ENST00000488494 F8W031 263 aaPredicted RBP22.17■■□□□ 1.14
ITGB1-215ENST00000488494 EYA2O00167 538 aa22.17■■□□□ 1.14
ITGB1-215ENST00000488494 MMP14P50281 582 aa22.17■■□□□ 1.14
ITGB1-215ENST00000488494 PUM3Q15397 648 aaKnown RBP22.17■■□□□ 1.14
ITGB1-215ENST00000488494 CLUAP1Q96AJ1 413 aa22.17■■□□□ 1.14
ITGB1-215ENST00000488494 FAM84BQ96KN1 310 aaPredicted RBP22.17■■□□□ 1.14
ITGB1-215ENST00000488494 SIL1Q9H173 461 aa22.17■■□□□ 1.14
ITGB1-215ENST00000488494 GBA2Q9HCG7 927 aaPredicted RBP22.17■■□□□ 1.14
ITGB1-215ENST00000488494 HDAC5Q9UQL6 1122 aa22.17■■□□□ 1.14
ITGB1-215ENST00000488494 FAM205AQ6ZU69 1335 aa22.16■■□□□ 1.14
ITGB1-215ENST00000488494 HUNKP57058 714 aa22.16■■□□□ 1.14
ITGB1-215ENST00000488494 FKBP1AP62942 108 aaKnown RBP22.16■■□□□ 1.14
ITGB1-215ENST00000488494 VPS37DQ86XT2 251 aa22.16■■□□□ 1.14
ITGB1-215ENST00000488494 TDRD7Q8NHU6 1098 aaKnown RBP22.16■■□□□ 1.14
ITGB1-215ENST00000488494 HHIPL1Q96JK4 782 aa22.16■■□□□ 1.14
ITGB1-215ENST00000488494 GNAI3P08754 354 aa22.15■■□□□ 1.14
ITGB1-215ENST00000488494 AIDAQ96BJ3 306 aa22.15■■□□□ 1.14
ITGB1-215ENST00000488494 IQSEC3Q9UPP2 1182 aaPredicted RBP22.15■■□□□ 1.14
ITGB1-215ENST00000488494 PAPPA2Q9BXP8 1791 aa22.15■■□□□ 1.14
ITGB1-215ENST00000488494 FOXN1O15353 648 aa22.14■■□□□ 1.13
ITGB1-215ENST00000488494 CAVIN4Q5BKX8 364 aa22.14■■□□□ 1.13
ITGB1-215ENST00000488494 MFSD14BQ5SR56 506 aa22.14■■□□□ 1.13
ITGB1-215ENST00000488494 ZKSCAN2Q63HK3 967 aa22.14■■□□□ 1.13
ITGB1-215ENST00000488494 ATG9AQ7Z3C6 839 aa22.14■■□□□ 1.13
ITGB1-215ENST00000488494 C2orf69Q8N8R5 385 aa22.14■■□□□ 1.13
ITGB1-215ENST00000488494 ZBED3Q96IU2 234 aaPredicted RBP22.14■■□□□ 1.13
ITGB1-215ENST00000488494 AOC2O75106 756 aa22.13■■□□□ 1.13
ITGB1-215ENST00000488494 CIAO1O76071 339 aa22.13■■□□□ 1.13
ITGB1-215ENST00000488494 FGFR2P21802 821 aa22.13■■□□□ 1.13
ITGB1-215ENST00000488494 DLGAP5Q15398 846 aa22.13■■□□□ 1.13
ITGB1-215ENST00000488494 FBXO33Q7Z6M2 555 aa22.13■■□□□ 1.13
ITGB1-215ENST00000488494 WBP1LQ9NX94 342 aa22.13■■□□□ 1.13
ITGB1-215ENST00000488494 PA2G4Q9UQ80 394 aaKnown RBP22.13■■□□□ 1.13
ITGB1-215ENST00000488494 ECM29Q5VYK3 1845 aa22.13■■□□□ 1.13
ITGB1-215ENST00000488494 IFIT1P09914 478 aaKnown RBP22.12■■□□□ 1.13
ITGB1-215ENST00000488494 CHAF1AQ13111 956 aaPredicted RBP22.12■■□□□ 1.13
ITGB1-215ENST00000488494 COL13A1Q5TAT6 717 aaPredicted RBP22.12■■□□□ 1.13
ITGB1-215ENST00000488494 APOBEC3FQ8IUX4 373 aaKnown RBP22.12■■□□□ 1.13
ITGB1-215ENST00000488494 FBXO3Q9UK99 471 aa22.12■■□□□ 1.13
ITGB1-215ENST00000488494 PCDHAC2Q9Y5I4 1007 aa22.12■■□□□ 1.13
ITGB1-215ENST00000488494 FRAT2O75474 233 aaPredicted RBP22.11■■□□□ 1.13
ITGB1-215ENST00000488494 SLC5A1P13866 664 aa22.11■■□□□ 1.13
ITGB1-215ENST00000488494 BCAMP50895 628 aa22.11■■□□□ 1.13
ITGB1-215ENST00000488494 MAP2K1Q02750 393 aaPredicted RBP22.11■■□□□ 1.13
ITGB1-215ENST00000488494 PRAMEF18Q5VWM3 479 aa22.11■■□□□ 1.13
ITGB1-215ENST00000488494 TMEM57Q8N5G2 664 aa22.11■■□□□ 1.13
ITGB1-215ENST00000488494 COL1A1P02452 1464 aaPredicted RBP22.1■■□□□ 1.13
ITGB1-215ENST00000488494 SPDYE2BA6NHP3 402 aa22.1■■□□□ 1.13
ITGB1-215ENST00000488494 SRGAP3O43295 1099 aa22.1■■□□□ 1.13
ITGB1-215ENST00000488494 SPDYE6P0CI01 402 aa22.1■■□□□ 1.13
ITGB1-215ENST00000488494 CFAP100Q494V2 611 aa22.1■■□□□ 1.13
ITGB1-215ENST00000488494 MTMR14Q8NCE2 650 aa22.1■■□□□ 1.13
ITGB1-215ENST00000488494 LPIN2Q92539 896 aa22.1■■□□□ 1.13
ITGB1-215ENST00000488494 RBM5P52756 815 aaKnown RBP eCLIP22.09■■□□□ 1.13
ITGB1-215ENST00000488494 ATP2B3Q16720 1220 aa22.09■■□□□ 1.13
ITGB1-215ENST00000488494 RGMBQ6NW40 437 aa22.09■■□□□ 1.13
ITGB1-215ENST00000488494 FTSJ3Q8IY81 847 aaKnown RBP22.09■■□□□ 1.13
ITGB1-215ENST00000488494 TTF2Q9UNY4 1162 aaKnown RBP22.09■■□□□ 1.13
ITGB1-215ENST00000488494 AOX1Q06278 1338 aa22.08■■□□□ 1.13
ITGB1-215ENST00000488494 MYH13Q9UKX3 1938 aa22.08■■□□□ 1.13
ITGB1-215ENST00000488494 GNAI2P04899 355 aa22.08■■□□□ 1.13
ITGB1-215ENST00000488494 MAP2K2P36507 400 aa22.08■■□□□ 1.13
ITGB1-215ENST00000488494 IL15P40933 162 aaPredicted RBP22.08■■□□□ 1.13
ITGB1-215ENST00000488494 CTCFP49711 727 aaPredicted RBP22.08■■□□□ 1.13
ITGB1-215ENST00000488494 MTX1Q13505 466 aa22.08■■□□□ 1.13
ITGB1-215ENST00000488494 COPRSQ9NQ92 184 aa22.08■■□□□ 1.13
ITGB1-215ENST00000488494 CEP126Q9P2H0 1117 aa22.08■■□□□ 1.13
ITGB1-215ENST00000488494 CLRN2A0PK11 232 aa22.07■■□□□ 1.12
ITGB1-215ENST00000488494 MYO1BO43795 1136 aa22.07■■□□□ 1.12
ITGB1-215ENST00000488494 ZNF157P51786 506 aaPredicted RBP22.06■■□□□ 1.12
ITGB1-215ENST00000488494 FKBP1BP68106 108 aa22.06■■□□□ 1.12
ITGB1-215ENST00000488494 NOGQ13253 232 aa22.06■■□□□ 1.12
ITGB1-215ENST00000488494 GRIK5Q16478 980 aa22.06■■□□□ 1.12
ITGB1-215ENST00000488494 MOB2Q70IA6 237 aa22.06■■□□□ 1.12
ITGB1-215ENST00000488494 TBC1D22AQ8WUA7 517 aa22.06■■□□□ 1.12
ITGB1-215ENST00000488494 PRMT6Q96LA8 375 aaPredicted RBP22.06■■□□□ 1.12
ITGB1-215ENST00000488494 VEZTQ9HBM0 779 aa22.06■■□□□ 1.12
ITGB1-215ENST00000488494 SERPINA10Q9UK55 444 aa22.06■■□□□ 1.12
ITGB1-215ENST00000488494 FAM155AB1AL88 458 aaPredicted RBP22.05■■□□□ 1.12
ITGB1-215ENST00000488494 NF2P35240 595 aa22.05■■□□□ 1.12
ITGB1-215ENST00000488494 TTLL12Q14166 644 aaPredicted RBP22.05■■□□□ 1.12
ITGB1-215ENST00000488494 ITPRIPQ8IWB1 547 aa22.05■■□□□ 1.12
ITGB1-215ENST00000488494 DZIP1LQ8IYY4 767 aaKnown RBP22.05■■□□□ 1.12
ITGB1-215ENST00000488494 BEGAINQ9BUH8 593 aa22.05■■□□□ 1.12
ITGB1-215ENST00000488494 SSC5DA1L4H1 1573 aa22.04■■□□□ 1.12
ITGB1-215ENST00000488494 HSPA8P11142 646 aaKnown RBP22.04■■□□□ 1.12
ITGB1-215ENST00000488494 RLBP1P12271 317 aa22.04■■□□□ 1.12
ITGB1-215ENST00000488494 CCDC102AQ96A19 550 aa22.04■■□□□ 1.12
ITGB1-215ENST00000488494 ZIC5Q96T25 663 aa22.04■■□□□ 1.12
ITGB1-215ENST00000488494 DEFB129Q9H1M3 183 aa22.04■■□□□ 1.12
ITGB1-215ENST00000488494 PNMA6EA0A0J9YXQ4 647 aa22.03■■□□□ 1.12
ITGB1-215ENST00000488494 SLC10A3P09131 477 aa22.03■■□□□ 1.12
ITGB1-215ENST00000488494 CRKP46108 304 aa22.03■■□□□ 1.12
ITGB1-215ENST00000488494 LBX1P52954 281 aa22.03■■□□□ 1.12
ITGB1-215ENST00000488494 IFFO2Q5TF58 517 aa22.03■■□□□ 1.12
ITGB1-215ENST00000488494 UBE2Q2LH0YL09 131 aa22.02■■□□□ 1.12
ITGB1-215ENST00000488494 ADORA1P30542 326 aa22.02■■□□□ 1.12
ITGB1-215ENST00000488494 RASAL3Q86YV0 1011 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms