RNA–Protein interactions for RNA: ENST00000486750.1

SP140-211, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-211ENST00000486750 DLGAP5Q15398 846 aa16.81■□□□□ 0.28
SP140-211ENST00000486750 LMBR1LQ6UX01 489 aa16.81■□□□□ 0.28
SP140-211ENST00000486750 ARMC9Q7Z3E5 817 aa16.81■□□□□ 0.28
SP140-211ENST00000486750 APOBEC3FQ8IUX4 373 aaKnown RBP16.81■□□□□ 0.28
SP140-211ENST00000486750 ZBED3Q96IU2 234 aaPredicted RBP16.81■□□□□ 0.28
SP140-211ENST00000486750 CHMP4AQ9BY43 222 aa16.81■□□□□ 0.28
SP140-211ENST00000486750 VEZTQ9HBM0 779 aa16.81■□□□□ 0.28
SP140-211ENST00000486750 GPR25O00155 361 aa16.8■□□□□ 0.28
SP140-211ENST00000486750 IFIT5Q13325 482 aaKnown RBP16.8■□□□□ 0.28
SP140-211ENST00000486750 CFAP100Q494V2 611 aa16.8■□□□□ 0.28
SP140-211ENST00000486750 IL16Q14005 1332 aa16.79■□□□□ 0.28
SP140-211ENST00000486750 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.28
SP140-211ENST00000486750 TAF7LQ5H9L4 462 aa16.79■□□□□ 0.28
SP140-211ENST00000486750 BEND3Q5T5X7 828 aa16.79■□□□□ 0.28
SP140-211ENST00000486750 SLC4A10Q6U841 1118 aa16.79■□□□□ 0.28
SP140-211ENST00000486750 DEFB129Q9H1M3 183 aa16.79■□□□□ 0.28
SP140-211ENST00000486750 NBPF12Q5TAG4 269 aaPredicted RBP16.78■□□□□ 0.28
SP140-211ENST00000486750 SPRYD7Q5W111 196 aa16.78■□□□□ 0.28
SP140-211ENST00000486750 CDAN1Q8IWY9 1227 aa16.78■□□□□ 0.28
SP140-211ENST00000486750 PRMT6Q96LA8 375 aaPredicted RBP16.78■□□□□ 0.28
SP140-211ENST00000486750 PUS3Q9BZE2 481 aaKnown RBP16.78■□□□□ 0.28
SP140-211ENST00000486750 IQSEC3Q9UPP2 1182 aaPredicted RBP16.78■□□□□ 0.28
SP140-211ENST00000486750 GYG1P46976 350 aa16.77■□□□□ 0.28
SP140-211ENST00000486750 TM4SF4P48230 202 aa16.77■□□□□ 0.28
SP140-211ENST00000486750 ZNF804AQ7Z570 1209 aa16.77■□□□□ 0.28
SP140-211ENST00000486750 CNNM1Q9NRU3 951 aa16.77■□□□□ 0.28
SP140-211ENST00000486750 GJA5P36382 358 aa16.76■□□□□ 0.27
SP140-211ENST00000486750 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
SP140-211ENST00000486750 LDLRAD1Q5T700 205 aa16.76■□□□□ 0.27
SP140-211ENST00000486750 FAM9BQ8IZU0 186 aa16.76■□□□□ 0.27
SP140-211ENST00000486750 SLC10A4Q96EP9 437 aa16.76■□□□□ 0.27
SP140-211ENST00000486750 SUCLG2Q96I99 432 aa16.76■□□□□ 0.27
SP140-211ENST00000486750 ARAP2Q8WZ64 1704 aa16.76■□□□□ 0.27
SP140-211ENST00000486750 IGF2BP3O00425 579 aaKnown RBP eCLIP16.75■□□□□ 0.27
SP140-211ENST00000486750 FKTNO75072 461 aa16.75■□□□□ 0.27
SP140-211ENST00000486750 SREBF2Q12772 1141 aa16.75■□□□□ 0.27
SP140-211ENST00000486750 GRIK5Q16478 980 aa16.75■□□□□ 0.27
SP140-211ENST00000486750 LDHAL6AQ6ZMR3 332 aa16.75■□□□□ 0.27
SP140-211ENST00000486750 REM2Q8IYK8 340 aaPredicted RBP16.75■□□□□ 0.27
SP140-211ENST00000486750 WNK4Q96J92 1243 aa16.75■□□□□ 0.27
SP140-211ENST00000486750 C9orf78Q9NZ63 289 aaPredicted RBP16.75■□□□□ 0.27
SP140-211ENST00000486750 ZSWIM8A7E2V4 1837 aa16.75■□□□□ 0.27
SP140-211ENST00000486750 SPDYE2BA6NHP3 402 aa16.74■□□□□ 0.27
SP140-211ENST00000486750 GRM8O00222 908 aa16.74■□□□□ 0.27
SP140-211ENST00000486750 SPDYE6P0CI01 402 aa16.74■□□□□ 0.27
SP140-211ENST00000486750 CCDC57Q2TAC2 916 aa16.74■□□□□ 0.27
SP140-211ENST00000486750 IL1R1P14778 569 aa16.73■□□□□ 0.27
SP140-211ENST00000486750 CHAF1AQ13111 956 aaPredicted RBP16.73■□□□□ 0.27
SP140-211ENST00000486750 IFNL1Q8IU54 200 aa16.73■□□□□ 0.27
SP140-211ENST00000486750 CNKSR2Q8WXI2 1034 aa16.73■□□□□ 0.27
SP140-211ENST00000486750 TDRD3Q9H7E2 651 aaKnown RBP16.73■□□□□ 0.27
SP140-211ENST00000486750 ELP3Q9H9T3 547 aa16.73■□□□□ 0.27
SP140-211ENST00000486750 LAMB1P07942 1786 aa16.72■□□□□ 0.27
SP140-211ENST00000486750 TCP10L2B9ZVM9 353 aa16.72■□□□□ 0.27
SP140-211ENST00000486750 CACNB3P54284 484 aa16.72■□□□□ 0.27
SP140-211ENST00000486750 CAP1Q01518 475 aa16.72■□□□□ 0.27
SP140-211ENST00000486750 RASA3Q14644 834 aa16.72■□□□□ 0.27
SP140-211ENST00000486750 MFSD14BQ5SR56 506 aa16.72■□□□□ 0.27
SP140-211ENST00000486750 WDR63Q8IWG1 891 aa16.72■□□□□ 0.27
SP140-211ENST00000486750 CD99L2Q8TCZ2 262 aa16.72■□□□□ 0.27
SP140-211ENST00000486750 TTF2Q9UNY4 1162 aaKnown RBP16.72■□□□□ 0.27
SP140-211ENST00000486750 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
SP140-211ENST00000486750 KIAA0100Q14667 2235 aaKnown RBP16.72■□□□□ 0.27
SP140-211ENST00000486750 MYH13Q9UKX3 1938 aa16.71■□□□□ 0.27
SP140-211ENST00000486750 ANP32CO43423 234 aa16.71■□□□□ 0.27
SP140-211ENST00000486750 PPP1R12BO60237 982 aaPredicted RBP16.71■□□□□ 0.27
SP140-211ENST00000486750 USP2O75604 605 aaPredicted RBP16.71■□□□□ 0.27
SP140-211ENST00000486750 ECM2O94769 699 aaPredicted RBP16.71■□□□□ 0.27
SP140-211ENST00000486750 FBXO46Q6PJ61 603 aaPredicted RBP16.71■□□□□ 0.27
SP140-211ENST00000486750 C15orf52Q6ZUT6 534 aaKnown RBP16.71■□□□□ 0.27
SP140-211ENST00000486750 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.27
SP140-211ENST00000486750 KAZALD1Q96I82 304 aa16.71■□□□□ 0.27
SP140-211ENST00000486750 ZNF70Q9UC06 446 aaPredicted RBP16.71■□□□□ 0.27
SP140-211ENST00000486750 COL1A1P02452 1464 aaPredicted RBP16.71■□□□□ 0.27
SP140-211ENST00000486750 AK9Q5TCS8 1911 aa16.7■□□□□ 0.26
SP140-211ENST00000486750 MYO1BO43795 1136 aa16.7■□□□□ 0.26
SP140-211ENST00000486750 NBPF7P0C2Y1 421 aaPredicted RBP16.7■□□□□ 0.26
SP140-211ENST00000486750 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
SP140-211ENST00000486750 MTMR14Q8NCE2 650 aa16.7■□□□□ 0.26
SP140-211ENST00000486750 SRCIN1Q9C0H9 1055 aa16.7■□□□□ 0.26
SP140-211ENST00000486750 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
SP140-211ENST00000486750 MANSC4A6NHS7 340 aaPredicted RBP16.69■□□□□ 0.26
SP140-211ENST00000486750 CRHR2Q13324 411 aa16.69■□□□□ 0.26
SP140-211ENST00000486750 PKN2Q16513 984 aaKnown RBP16.69■□□□□ 0.26
SP140-211ENST00000486750 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
SP140-211ENST00000486750 FAM84BQ96KN1 310 aaPredicted RBP16.69■□□□□ 0.26
SP140-211ENST00000486750 BICC1Q9H694 974 aaKnown RBP16.69■□□□□ 0.26
SP140-211ENST00000486750 POTEFA5A3E0 1075 aa16.68■□□□□ 0.26
SP140-211ENST00000486750 HIBADHP31937 336 aaKnown RBP16.68■□□□□ 0.26
SP140-211ENST00000486750 IREB2P48200 963 aaKnown RBP16.68■□□□□ 0.26
SP140-211ENST00000486750 MAP3K11Q16584 847 aa16.68■□□□□ 0.26
SP140-211ENST00000486750 TDRD7Q8NHU6 1098 aaKnown RBP16.68■□□□□ 0.26
SP140-211ENST00000486750 OPTNQ96CV9 577 aa16.68■□□□□ 0.26
SP140-211ENST00000486750 PTPN18Q99952 460 aa16.68■□□□□ 0.26
SP140-211ENST00000486750 CRKP46108 304 aa16.67■□□□□ 0.26
SP140-211ENST00000486750 SUPT20HL1Q3ZLR7 823 aa16.67■□□□□ 0.26
SP140-211ENST00000486750 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
SP140-211ENST00000486750 DZIP1LQ8IYY4 767 aaKnown RBP16.67■□□□□ 0.26
SP140-211ENST00000486750 FAM205AQ6ZU69 1335 aa16.67■□□□□ 0.26
SP140-211ENST00000486750 ALDH1L1O75891 902 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms